RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 SYT11Q9BT88 431 aa19.77■□□□□ 0.76
SSBP4-212ENST00000601919 MARCH5Q9NX47 278 aa19.77■□□□□ 0.76
SSBP4-212ENST00000601919 DDX43Q9NXZ2 648 aaKnown RBP19.77■□□□□ 0.76
SSBP4-212ENST00000601919 HMGXB4Q9UGU5 601 aa19.77■□□□□ 0.76
SSBP4-212ENST00000601919 PCDHB12Q9Y5F1 795 aa19.77■□□□□ 0.76
SSBP4-212ENST00000601919 MRPL42Q9Y6G3 142 aaKnown RBP19.77■□□□□ 0.76
SSBP4-212ENST00000601919 A0A087X0T9 212 aa19.76■□□□□ 0.75
SSBP4-212ENST00000601919 I3L4J1 428 aa19.76■□□□□ 0.75
SSBP4-212ENST00000601919 TLL1O43897 1013 aa19.76■□□□□ 0.75
SSBP4-212ENST00000601919 MMEP08473 750 aa19.76■□□□□ 0.75
SSBP4-212ENST00000601919 PDGFRBP09619 1106 aa19.76■□□□□ 0.75
SSBP4-212ENST00000601919 FAM228BP0C875 321 aa19.76■□□□□ 0.75
SSBP4-212ENST00000601919 YWHAHQ04917 246 aaPredicted RBP19.76■□□□□ 0.75
SSBP4-212ENST00000601919 GFPT1Q06210 699 aaPredicted RBP19.76■□□□□ 0.75
SSBP4-212ENST00000601919 FUT10Q6P4F1 479 aa19.76■□□□□ 0.75
SSBP4-212ENST00000601919 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.76■□□□□ 0.75
SSBP4-212ENST00000601919 ACOT1Q86TX2 421 aa19.76■□□□□ 0.75
SSBP4-212ENST00000601919 ZSCAN30Q86W11 494 aa19.76■□□□□ 0.75
SSBP4-212ENST00000601919 GLYCTKQ8IVS8 523 aa19.76■□□□□ 0.75
SSBP4-212ENST00000601919 SLC30A5Q8TAD4 765 aa19.76■□□□□ 0.75
SSBP4-212ENST00000601919 IGSF21Q96ID5 467 aa19.76■□□□□ 0.75
SSBP4-212ENST00000601919 RNPC3Q96LT9 517 aaKnown RBP19.76■□□□□ 0.75
SSBP4-212ENST00000601919 OXCT2Q9BYC2 517 aaPredicted RBP19.76■□□□□ 0.75
SSBP4-212ENST00000601919 ACP6Q9NPH0 428 aa19.76■□□□□ 0.75
SSBP4-212ENST00000601919 SPTLC3Q9NUV7 552 aa19.76■□□□□ 0.75
SSBP4-212ENST00000601919 SPG21Q9NZD8 308 aa19.76■□□□□ 0.75
SSBP4-212ENST00000601919 HCSTQ9UBK5 93 aa19.76■□□□□ 0.75
SSBP4-212ENST00000601919 CDH9Q9ULB4 789 aa19.76■□□□□ 0.75
SSBP4-212ENST00000601919 PYCARDQ9ULZ3 195 aa19.76■□□□□ 0.75
SSBP4-212ENST00000601919 F8W810 466 aa19.75■□□□□ 0.75
SSBP4-212ENST00000601919 DDX3XO00571 662 aaKnown RBP eCLIP19.75■□□□□ 0.75
SSBP4-212ENST00000601919 LSM8O95777 96 aaKnown RBP19.75■□□□□ 0.75
SSBP4-212ENST00000601919 GZMAP12544 262 aa19.75■□□□□ 0.75
SSBP4-212ENST00000601919 CHRNB2P17787 502 aa19.75■□□□□ 0.75
SSBP4-212ENST00000601919 BRD2P25440 801 aaKnown RBP19.75■□□□□ 0.75
SSBP4-212ENST00000601919 MSNP26038 577 aaKnown RBP19.75■□□□□ 0.75
SSBP4-212ENST00000601919 FMO1Q01740 532 aa19.75■□□□□ 0.75
SSBP4-212ENST00000601919 CNGA2Q16280 664 aa19.75■□□□□ 0.75
SSBP4-212ENST00000601919 FAM171A1Q5VUB5 890 aa19.75■□□□□ 0.75
SSBP4-212ENST00000601919 ALKBH5Q6P6C2 394 aaKnown RBP19.75■□□□□ 0.75
SSBP4-212ENST00000601919 TOGARAM2Q6ZUX3 1019 aa19.75■□□□□ 0.75
SSBP4-212ENST00000601919 OSTM1Q86WC4 334 aa19.75■□□□□ 0.75
SSBP4-212ENST00000601919 COLGALT1Q8NBJ5 622 aa19.75■□□□□ 0.75
SSBP4-212ENST00000601919 B3GALNT2Q8NCR0 500 aa19.75■□□□□ 0.75
SSBP4-212ENST00000601919 TMEM169Q96HH4 297 aa19.75■□□□□ 0.75
SSBP4-212ENST00000601919 ACBD6Q9BR61 282 aa19.75■□□□□ 0.75
SSBP4-212ENST00000601919 NAGPAQ9UK23 515 aa19.75■□□□□ 0.75
SSBP4-212ENST00000601919 PCDHGC3Q9UN70 934 aa19.75■□□□□ 0.75
SSBP4-212ENST00000601919 RWDD3Q9Y3V2 267 aa19.75■□□□□ 0.75
SSBP4-212ENST00000601919 TIMM13Q9Y5L4 95 aaPredicted RBP19.75■□□□□ 0.75
SSBP4-212ENST00000601919 ADGRG1Q9Y653 693 aa19.75■□□□□ 0.75
SSBP4-212ENST00000601919 KIAA1671Q9BY89 1806 aa19.74■□□□□ 0.75
SSBP4-212ENST00000601919 NT5C1B-RDH14C9J2C7 533 aa19.74■□□□□ 0.75
SSBP4-212ENST00000601919 H7C4K7 107 aa19.74■□□□□ 0.75
SSBP4-212ENST00000601919 OAZ2O95190 189 aa19.74■□□□□ 0.75
SSBP4-212ENST00000601919 LMO2P25791 158 aa19.74■□□□□ 0.75
SSBP4-212ENST00000601919 TSPY1Q01534 308 aa19.74■□□□□ 0.75
SSBP4-212ENST00000601919 ORC1Q13415 861 aa19.74■□□□□ 0.75
SSBP4-212ENST00000601919 MAPRE1Q15691 268 aaKnown RBP19.74■□□□□ 0.75
SSBP4-212ENST00000601919 CCDC122Q5T0U0 273 aa19.74■□□□□ 0.75
SSBP4-212ENST00000601919 ARHGAP17Q68EM7 881 aa19.74■□□□□ 0.75
SSBP4-212ENST00000601919 KIAA1328Q86T90 577 aa19.74■□□□□ 0.75
SSBP4-212ENST00000601919 SLC39A11Q8N1S5 342 aa19.74■□□□□ 0.75
SSBP4-212ENST00000601919 LNX1Q8TBB1 728 aaPredicted RBP19.74■□□□□ 0.75
SSBP4-212ENST00000601919 KIAA1524Q8TCG1 905 aa19.74■□□□□ 0.75
SSBP4-212ENST00000601919 SP7Q8TDD2 431 aaPredicted RBP19.74■□□□□ 0.75
SSBP4-212ENST00000601919 SYT15Q9BQS2 421 aa19.74■□□□□ 0.75
SSBP4-212ENST00000601919 DESI2Q9BSY9 194 aa19.74■□□□□ 0.75
SSBP4-212ENST00000601919 ZNF518BQ9C0D4 1074 aa19.74■□□□□ 0.75
SSBP4-212ENST00000601919 ATP8B3O60423 1300 aa19.74■□□□□ 0.75
SSBP4-212ENST00000601919 MKI67P46013 3256 aaKnown RBP19.73■□□□□ 0.75
SSBP4-212ENST00000601919 GOLGA6L9A6NEM1 432 aa19.73■□□□□ 0.75
SSBP4-212ENST00000601919 CAPN15O75808 1086 aa19.73■□□□□ 0.75
SSBP4-212ENST00000601919 PTPN1P18031 435 aaKnown RBP19.73■□□□□ 0.75
SSBP4-212ENST00000601919 FGFR3P22607 806 aa19.73■□□□□ 0.75
SSBP4-212ENST00000601919 TKTP29401 623 aaKnown RBP19.73■□□□□ 0.75
SSBP4-212ENST00000601919 PBX3P40426 434 aa19.73■□□□□ 0.75
SSBP4-212ENST00000601919 MAGEA1P43355 309 aa19.73■□□□□ 0.75
SSBP4-212ENST00000601919 CYP27A1Q02318 531 aa19.73■□□□□ 0.75
SSBP4-212ENST00000601919 KRT17Q04695 432 aa19.73■□□□□ 0.75
SSBP4-212ENST00000601919 CLEC16AQ2KHT3 1053 aa19.73■□□□□ 0.75
SSBP4-212ENST00000601919 USP41Q3LFD5 358 aa19.73■□□□□ 0.75
SSBP4-212ENST00000601919 ZNF280DQ6N043 979 aa19.73■□□□□ 0.75
SSBP4-212ENST00000601919 LCLAT1Q6UWP7 414 aa19.73■□□□□ 0.75
SSBP4-212ENST00000601919 TMEM35BQ8NCS4 154 aa19.73■□□□□ 0.75
SSBP4-212ENST00000601919 ACRBPQ8NEB7 543 aa19.73■□□□□ 0.75
SSBP4-212ENST00000601919 TFAP2BQ92481 460 aa19.73■□□□□ 0.75
SSBP4-212ENST00000601919 CLP1Q92989 425 aaKnown RBP19.73■□□□□ 0.75
SSBP4-212ENST00000601919 TTPALQ9BTX7 342 aa19.73■□□□□ 0.75
SSBP4-212ENST00000601919 GPR62Q9BZJ7 368 aa19.73■□□□□ 0.75
SSBP4-212ENST00000601919 UBE2OQ9C0C9 1292 aaKnown RBP19.73■□□□□ 0.75
SSBP4-212ENST00000601919 LHX5Q9H2C1 402 aa19.73■□□□□ 0.75
SSBP4-212ENST00000601919 HESX1Q9UBX0 185 aa19.73■□□□□ 0.75
SSBP4-212ENST00000601919 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.73■□□□□ 0.75
SSBP4-212ENST00000601919 PPP2R2CQ9Y2T4 447 aa19.73■□□□□ 0.75
SSBP4-212ENST00000601919 PCDHA13Q9Y5I0 950 aa19.73■□□□□ 0.75
SSBP4-212ENST00000601919 O00370 1275 aa19.72■□□□□ 0.75
SSBP4-212ENST00000601919 RTN2O75298 545 aa19.72■□□□□ 0.75
SSBP4-212ENST00000601919 CALCAP01258 141 aa19.72■□□□□ 0.75
SSBP4-212ENST00000601919 VARS2Q5ST30 1063 aaKnown RBP19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms