RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 SOX1O00570 391 aaPredicted RBP16.96■□□□□ 0.31
CSNK1D-212ENST00000580061 C2CD2LO14523 706 aa16.96■□□□□ 0.31
CSNK1D-212ENST00000580061 PDGFRBP09619 1106 aa16.96■□□□□ 0.31
CSNK1D-212ENST00000580061 PNMA6AP0CW24 399 aaPredicted RBP16.96■□□□□ 0.31
CSNK1D-212ENST00000580061 KRT5P13647 590 aa16.96■□□□□ 0.31
CSNK1D-212ENST00000580061 ACAT1P24752 427 aaKnown RBP16.96■□□□□ 0.31
CSNK1D-212ENST00000580061 CASP14P31944 242 aa16.96■□□□□ 0.31
CSNK1D-212ENST00000580061 FXR1P51114 621 aaKnown RBP eCLIP16.96■□□□□ 0.31
CSNK1D-212ENST00000580061 ZNF132P52740 706 aa16.96■□□□□ 0.31
CSNK1D-212ENST00000580061 RAD23BP54727 409 aa16.96■□□□□ 0.31
CSNK1D-212ENST00000580061 PTPN14Q15678 1187 aa16.96■□□□□ 0.31
CSNK1D-212ENST00000580061 PSMD5Q16401 504 aa16.96■□□□□ 0.31
CSNK1D-212ENST00000580061 CTXN3Q4LDR2 81 aa16.96■□□□□ 0.31
CSNK1D-212ENST00000580061 ZNF394Q53GI3 561 aa16.96■□□□□ 0.31
CSNK1D-212ENST00000580061 TMC7Q7Z402 723 aa16.96■□□□□ 0.31
CSNK1D-212ENST00000580061 PPFIBP1Q86W92 1011 aa16.96■□□□□ 0.31
CSNK1D-212ENST00000580061 FAM71AQ8IYT1 594 aa16.96■□□□□ 0.31
CSNK1D-212ENST00000580061 OR10T2Q8NGX3 314 aa16.96■□□□□ 0.31
CSNK1D-212ENST00000580061 CPLX3Q8WVH0 158 aa16.96■□□□□ 0.31
CSNK1D-212ENST00000580061 AUTS2Q8WXX7 1259 aa16.96■□□□□ 0.31
CSNK1D-212ENST00000580061 NT5C1AQ9BXI3 368 aa16.96■□□□□ 0.31
CSNK1D-212ENST00000580061 OXCT2Q9BYC2 517 aaPredicted RBP16.96■□□□□ 0.31
CSNK1D-212ENST00000580061 ELOVL4Q9GZR5 314 aa16.96■□□□□ 0.31
CSNK1D-212ENST00000580061 LMAN2LQ9H0V9 348 aa16.96■□□□□ 0.31
CSNK1D-212ENST00000580061 CDH9Q9ULB4 789 aa16.96■□□□□ 0.31
CSNK1D-212ENST00000580061 MYO6Q9UM54 1294 aa16.96■□□□□ 0.31
CSNK1D-212ENST00000580061 OR6C75A6NL08 312 aa16.95■□□□□ 0.3
CSNK1D-212ENST00000580061 FSCN2O14926 492 aa16.95■□□□□ 0.3
CSNK1D-212ENST00000580061 CXCL14O95715 111 aa16.95■□□□□ 0.3
CSNK1D-212ENST00000580061 PCSK1P29120 753 aa16.95■□□□□ 0.3
CSNK1D-212ENST00000580061 SOX5P35711 763 aa16.95■□□□□ 0.3
CSNK1D-212ENST00000580061 STAT1P42224 750 aa16.95■□□□□ 0.3
CSNK1D-212ENST00000580061 ORC1Q13415 861 aa16.95■□□□□ 0.3
CSNK1D-212ENST00000580061 SMC1AQ14683 1233 aaKnown RBP16.95■□□□□ 0.3
CSNK1D-212ENST00000580061 RSPO2Q6UXX9 243 aaPredicted RBP16.95■□□□□ 0.3
CSNK1D-212ENST00000580061 DRC7Q8IY82 874 aa16.95■□□□□ 0.3
CSNK1D-212ENST00000580061 CRYBG2Q8N1P7 616 aa16.95■□□□□ 0.3
CSNK1D-212ENST00000580061 SLC4A11Q8NBS3 891 aa16.95■□□□□ 0.3
CSNK1D-212ENST00000580061 RBBP8NLQ8NC74 664 aaPredicted RBP16.95■□□□□ 0.3
CSNK1D-212ENST00000580061 GDPD5Q8WTR4 605 aa16.95■□□□□ 0.3
CSNK1D-212ENST00000580061 TMEM176AQ96HP8 235 aa16.95■□□□□ 0.3
CSNK1D-212ENST00000580061 TTYH1Q9H313 450 aaPredicted RBP16.95■□□□□ 0.3
CSNK1D-212ENST00000580061 DPEP3Q9H4B8 488 aa16.95■□□□□ 0.3
CSNK1D-212ENST00000580061 RXFP1Q9HBX9 757 aa16.95■□□□□ 0.3
CSNK1D-212ENST00000580061 NGRNQ9NPE2 291 aaKnown RBP16.95■□□□□ 0.3
CSNK1D-212ENST00000580061 ENTPD7Q9NQZ7 604 aa16.95■□□□□ 0.3
CSNK1D-212ENST00000580061 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.95■□□□□ 0.3
CSNK1D-212ENST00000580061 LUC7L2Q9Y383 392 aaKnown RBP16.95■□□□□ 0.3
CSNK1D-212ENST00000580061 IRAK3Q9Y616 596 aa16.95■□□□□ 0.3
CSNK1D-212ENST00000580061 PTPRDP23468 1912 aa16.95■□□□□ 0.3
CSNK1D-212ENST00000580061 MYO9BQ13459 2157 aa16.95■□□□□ 0.3
CSNK1D-212ENST00000580061 LRRC53A6NM62 1247 aa16.94■□□□□ 0.3
CSNK1D-212ENST00000580061 RFXAPO00287 272 aa16.94■□□□□ 0.3
CSNK1D-212ENST00000580061 LPXNO60711 386 aa16.94■□□□□ 0.3
CSNK1D-212ENST00000580061 ATP2C2O75185 946 aa16.94■□□□□ 0.3
CSNK1D-212ENST00000580061 TPM1P09493 284 aa16.94■□□□□ 0.3
CSNK1D-212ENST00000580061 IRS1P35568 1242 aa16.94■□□□□ 0.3
CSNK1D-212ENST00000580061 USP8P40818 1118 aa16.94■□□□□ 0.3
CSNK1D-212ENST00000580061 PSMC1P62191 440 aaKnown RBP16.94■□□□□ 0.3
CSNK1D-212ENST00000580061 ZBED6P86452 979 aa16.94■□□□□ 0.3
CSNK1D-212ENST00000580061 BMS1Q14692 1282 aaKnown RBP16.94■□□□□ 0.3
CSNK1D-212ENST00000580061 INTS6LQ5JSJ4 861 aaKnown RBP16.94■□□□□ 0.3
CSNK1D-212ENST00000580061 PLPP4Q5VZY2 271 aa16.94■□□□□ 0.3
CSNK1D-212ENST00000580061 SLC8B1Q6J4K2 584 aa16.94■□□□□ 0.3
CSNK1D-212ENST00000580061 PDE12Q6L8Q7 609 aaKnown RBP16.94■□□□□ 0.3
CSNK1D-212ENST00000580061 ACOT1Q86TX2 421 aa16.94■□□□□ 0.3
CSNK1D-212ENST00000580061 MRPL43Q8N983 215 aaKnown RBP16.94■□□□□ 0.3
CSNK1D-212ENST00000580061 ZNF397Q8NF99 534 aaPredicted RBP16.94■□□□□ 0.3
CSNK1D-212ENST00000580061 TNIP3Q96KP6 325 aa16.94■□□□□ 0.3
CSNK1D-212ENST00000580061 TMEM209Q96SK2 561 aa16.94■□□□□ 0.3
CSNK1D-212ENST00000580061 PKMYT1Q99640 499 aa16.94■□□□□ 0.3
CSNK1D-212ENST00000580061 SYT15Q9BQS2 421 aa16.94■□□□□ 0.3
CSNK1D-212ENST00000580061 CLSTN3Q9BQT9 956 aa16.94■□□□□ 0.3
CSNK1D-212ENST00000580061 ZCWPW1Q9H0M4 648 aa16.94■□□□□ 0.3
CSNK1D-212ENST00000580061 FNIP2Q9P278 1114 aa16.94■□□□□ 0.3
CSNK1D-212ENST00000580061 CDY1Q9Y6F8 540 aa16.94■□□□□ 0.3
CSNK1D-212ENST00000580061 PLXNA3P51805 1871 aa16.94■□□□□ 0.3
CSNK1D-212ENST00000580061 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.93■□□□□ 0.3
CSNK1D-212ENST00000580061 MYBPHLA2RUH7 354 aa16.93■□□□□ 0.3
CSNK1D-212ENST00000580061 C2orf71A6NGG8 1288 aa16.93■□□□□ 0.3
CSNK1D-212ENST00000580061 CYP26A1O43174 497 aa16.93■□□□□ 0.3
CSNK1D-212ENST00000580061 ADAM12O43184 909 aa16.93■□□□□ 0.3
CSNK1D-212ENST00000580061 GFPT2O94808 682 aa16.93■□□□□ 0.3
CSNK1D-212ENST00000580061 CSPG5O95196 566 aa16.93■□□□□ 0.3
CSNK1D-212ENST00000580061 PAEPP09466 180 aa16.93■□□□□ 0.3
CSNK1D-212ENST00000580061 PTPN1P18031 435 aaKnown RBP16.93■□□□□ 0.3
CSNK1D-212ENST00000580061 RPL17P18621 184 aaKnown RBP16.93■□□□□ 0.3
CSNK1D-212ENST00000580061 CA8P35219 290 aa16.93■□□□□ 0.3
CSNK1D-212ENST00000580061 CLCN1P35523 988 aa16.93■□□□□ 0.3
CSNK1D-212ENST00000580061 KRT9P35527 623 aa16.93■□□□□ 0.3
CSNK1D-212ENST00000580061 TSPY1Q01534 308 aa16.93■□□□□ 0.3
CSNK1D-212ENST00000580061 CREMQ03060 361 aa16.93■□□□□ 0.3
CSNK1D-212ENST00000580061 FAM171BQ6P995 826 aa16.93■□□□□ 0.3
CSNK1D-212ENST00000580061 LRRTM3Q86VH5 581 aa16.93■□□□□ 0.3
CSNK1D-212ENST00000580061 SPC24Q8NBT2 197 aa16.93■□□□□ 0.3
CSNK1D-212ENST00000580061 B3GALNT2Q8NCR0 500 aa16.93■□□□□ 0.3
CSNK1D-212ENST00000580061 MICAL1Q8TDZ2 1067 aa16.93■□□□□ 0.3
CSNK1D-212ENST00000580061 ANP32BQ92688 251 aaKnown RBP16.93■□□□□ 0.3
CSNK1D-212ENST00000580061 LRCH3Q96II8 777 aa16.93■□□□□ 0.3
CSNK1D-212ENST00000580061 DNAI2Q9GZS0 605 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms