RNA–Protein interactions for RNA: ENST00000530720.1

CTNND1-226, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 832 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-226ENST00000530720 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5□□□□□ -1.61
CTNND1-226ENST00000530720 ANKEF1Q9NU02 776 aa5□□□□□ -1.61
CTNND1-226ENST00000530720 PDRG1Q9NUG6 133 aa5□□□□□ -1.61
CTNND1-226ENST00000530720 FBXL21Q9UKT6 434 aa5□□□□□ -1.61
CTNND1-226ENST00000530720 SSX2IPQ9Y2D8 614 aa5□□□□□ -1.61
CTNND1-226ENST00000530720 MTF2Q9Y483 593 aaPredicted RBP5□□□□□ -1.61
CTNND1-226ENST00000530720 ZNF292O60281 2723 aa5□□□□□ -1.61
CTNND1-226ENST00000530720 CASTOR2A6NHX0 329 aa4.99□□□□□ -1.61
CTNND1-226ENST00000530720 KIAA1324LA8MWY0 1029 aaPredicted RBP4.99□□□□□ -1.61
CTNND1-226ENST00000530720 BTBD18B2RXH4 712 aa4.99□□□□□ -1.61
CTNND1-226ENST00000530720 LINC01387J3KSC0 135 aa4.99□□□□□ -1.61
CTNND1-226ENST00000530720 ABLIM1O14639 778 aa4.99□□□□□ -1.61
CTNND1-226ENST00000530720 PAX4O43316 350 aa4.99□□□□□ -1.61
CTNND1-226ENST00000530720 JAK2O60674 1132 aa4.99□□□□□ -1.61
CTNND1-226ENST00000530720 RECQL4O94761 1208 aa4.99□□□□□ -1.61
CTNND1-226ENST00000530720 MED26O95402 600 aa4.99□□□□□ -1.61
CTNND1-226ENST00000530720 C8AP07357 584 aa4.99□□□□□ -1.61
CTNND1-226ENST00000530720 POU2F2P09086 479 aa4.99□□□□□ -1.61
CTNND1-226ENST00000530720 TDGF1P13385 188 aa4.99□□□□□ -1.61
CTNND1-226ENST00000530720 TGM1P22735 817 aa4.99□□□□□ -1.61
CTNND1-226ENST00000530720 FCARP24071 287 aa4.99□□□□□ -1.61
CTNND1-226ENST00000530720 BRD2P25440 801 aaKnown RBP4.99□□□□□ -1.61
CTNND1-226ENST00000530720 HOXA9P31269 272 aa4.99□□□□□ -1.61
CTNND1-226ENST00000530720 KRT2P35908 639 aa4.99□□□□□ -1.61
CTNND1-226ENST00000530720 ID4P47928 161 aa4.99□□□□□ -1.61
CTNND1-226ENST00000530720 GPC5P78333 572 aa4.99□□□□□ -1.61
CTNND1-226ENST00000530720 SOX4Q06945 474 aaPredicted RBP4.99□□□□□ -1.61
CTNND1-226ENST00000530720 FZD5Q13467 585 aa4.99□□□□□ -1.61
CTNND1-226ENST00000530720 TFDP1Q14186 410 aa4.99□□□□□ -1.61
CTNND1-226ENST00000530720 CALCRLQ16602 461 aa4.99□□□□□ -1.61
CTNND1-226ENST00000530720 ECM1Q16610 540 aa4.99□□□□□ -1.61
CTNND1-226ENST00000530720 SLC5A9Q2M3M2 681 aa4.99□□□□□ -1.61
CTNND1-226ENST00000530720 SPECC1Q5M775 1068 aa4.99□□□□□ -1.61
CTNND1-226ENST00000530720 FAM171A1Q5VUB5 890 aa4.99□□□□□ -1.61
CTNND1-226ENST00000530720 DCLRE1AQ6PJP8 1040 aa4.99□□□□□ -1.61
CTNND1-226ENST00000530720 OTUD6AQ7L8S5 288 aa4.99□□□□□ -1.61
CTNND1-226ENST00000530720 CATSPER3Q86XQ3 398 aa4.99□□□□□ -1.61
CTNND1-226ENST00000530720 C1orf210Q8IVY1 113 aa4.99□□□□□ -1.61
CTNND1-226ENST00000530720 EXOC8Q8IYI6 725 aa4.99□□□□□ -1.61
CTNND1-226ENST00000530720 ARMC10Q8N2F6 343 aa4.99□□□□□ -1.61
CTNND1-226ENST00000530720 DCLK2Q8N568 766 aa4.99□□□□□ -1.61
CTNND1-226ENST00000530720 TMEM87AQ8NBN3 555 aa4.99□□□□□ -1.61
CTNND1-226ENST00000530720 GALNT11Q8NCW6 608 aa4.99□□□□□ -1.61
CTNND1-226ENST00000530720 OR13H1Q8NG92 308 aa4.99□□□□□ -1.61
CTNND1-226ENST00000530720 ITFG1Q8TB96 612 aa4.99□□□□□ -1.61
CTNND1-226ENST00000530720 GTF3C6Q969F1 213 aa4.99□□□□□ -1.61
CTNND1-226ENST00000530720 NXPE3Q969Y0 559 aa4.99□□□□□ -1.61
CTNND1-226ENST00000530720 PPP1R10Q96QC0 940 aaKnown RBP4.99□□□□□ -1.61
CTNND1-226ENST00000530720 KIFC3Q9BVG8 833 aa4.99□□□□□ -1.61
CTNND1-226ENST00000530720 PLA2G2FQ9BZM2 168 aa4.99□□□□□ -1.61
CTNND1-226ENST00000530720 HCFC1R1Q9NWW0 138 aa4.99□□□□□ -1.61
CTNND1-226ENST00000530720 SNTG2Q9NY99 539 aa4.99□□□□□ -1.61
CTNND1-226ENST00000530720 DLL3Q9NYJ7 618 aa4.99□□□□□ -1.61
CTNND1-226ENST00000530720 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.99□□□□□ -1.61
CTNND1-226ENST00000530720 ORC3Q9UBD5 711 aaPredicted RBP4.99□□□□□ -1.61
CTNND1-226ENST00000530720 STOML1Q9UBI4 398 aa4.99□□□□□ -1.61
CTNND1-226ENST00000530720 CDH7Q9ULB5 785 aa4.99□□□□□ -1.61
CTNND1-226ENST00000530720 PCDHA12Q9UN75 941 aa4.99□□□□□ -1.61
CTNND1-226ENST00000530720 SIT1Q9Y3P8 196 aa4.99□□□□□ -1.61
CTNND1-226ENST00000530720 CACNA1AO00555 2505 aa4.99□□□□□ -1.61
CTNND1-226ENST00000530720 NCANO14594 1321 aa4.98□□□□□ -1.61
CTNND1-226ENST00000530720 SF3B1O75533 1304 aaKnown RBP eCLIP4.98□□□□□ -1.61
CTNND1-226ENST00000530720 PDCD11Q14690 1871 aaKnown RBP4.98□□□□□ -1.61
CTNND1-226ENST00000530720 GVINP1Q7Z2Y8 2422 aa4.98□□□□□ -1.61
CTNND1-226ENST00000530720 TMEM189-UBE2V1I3L0A0 370 aa4.98□□□□□ -1.61
CTNND1-226ENST00000530720 I3L4J1 428 aa4.98□□□□□ -1.61
CTNND1-226ENST00000530720 CCL16O15467 120 aa4.98□□□□□ -1.61
CTNND1-226ENST00000530720 TBC1D4O60343 1298 aa4.98□□□□□ -1.61
CTNND1-226ENST00000530720 NEMFO60524 1076 aa4.98□□□□□ -1.61
CTNND1-226ENST00000530720 USO1O60763 962 aaKnown RBP4.98□□□□□ -1.61
CTNND1-226ENST00000530720 CDKL5O76039 1030 aa4.98□□□□□ -1.61
CTNND1-226ENST00000530720 WISP1O95388 367 aa4.98□□□□□ -1.61
CTNND1-226ENST00000530720 TGFB1P01137 390 aa4.98□□□□□ -1.61
CTNND1-226ENST00000530720 LMNAP02545 664 aaKnown RBP4.98□□□□□ -1.61
CTNND1-226ENST00000530720 HNRNPA1P09651 372 aaKnown RBP eCLIP4.98□□□□□ -1.61
CTNND1-226ENST00000530720 XRCC6P12956 609 aaKnown RBP eCLIP4.98□□□□□ -1.61
CTNND1-226ENST00000530720 CD72P21854 359 aa4.98□□□□□ -1.61
CTNND1-226ENST00000530720 RFX1P22670 979 aa4.98□□□□□ -1.61
CTNND1-226ENST00000530720 TXKP42681 527 aa4.98□□□□□ -1.61
CTNND1-226ENST00000530720 CLCNKBP51801 687 aa4.98□□□□□ -1.61
CTNND1-226ENST00000530720 SNW1Q13573 536 aaKnown RBP4.98□□□□□ -1.61
CTNND1-226ENST00000530720 RAB33AQ14088 237 aa4.98□□□□□ -1.61
CTNND1-226ENST00000530720 PSMD5Q16401 504 aa4.98□□□□□ -1.61
CTNND1-226ENST00000530720 UPP1Q16831 310 aa4.98□□□□□ -1.61
CTNND1-226ENST00000530720 SWI5Q1ZZU3 235 aa4.98□□□□□ -1.61
CTNND1-226ENST00000530720 XKR4Q5GH76 650 aa4.98□□□□□ -1.61
CTNND1-226ENST00000530720 GLRA4Q5JXX5 417 aa4.98□□□□□ -1.61
CTNND1-226ENST00000530720 NT5DC1Q5TFE4 455 aa4.98□□□□□ -1.61
CTNND1-226ENST00000530720 C16orf46Q6P387 395 aa4.98□□□□□ -1.61
CTNND1-226ENST00000530720 CPLX2Q6PUV4 134 aaKnown RBP4.98□□□□□ -1.61
CTNND1-226ENST00000530720 MAEAQ7L5Y9 396 aa4.98□□□□□ -1.61
CTNND1-226ENST00000530720 NOSTRINQ8IVI9 506 aa4.98□□□□□ -1.61
CTNND1-226ENST00000530720 DIS3L2Q8IYB7 885 aaKnown RBP4.98□□□□□ -1.61
CTNND1-226ENST00000530720 KIAA2013Q8IYS2 634 aa4.98□□□□□ -1.61
CTNND1-226ENST00000530720 DAW1Q8N136 415 aa4.98□□□□□ -1.61
CTNND1-226ENST00000530720 CEP120Q8N960 986 aa4.98□□□□□ -1.61
CTNND1-226ENST00000530720 SLC7A14Q8TBB6 771 aa4.98□□□□□ -1.61
CTNND1-226ENST00000530720 CLDN23Q96B33 292 aa4.98□□□□□ -1.61
CTNND1-226ENST00000530720 PRIMPOLQ96LW4 560 aa4.98□□□□□ -1.61
CTNND1-226ENST00000530720 ZMAT2Q96NC0 199 aaKnown RBP4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms