RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 TIMP4Q99727 224 aa4.66□□□□□ -1.66
HDAC2-208ENST00000520746 ACO2Q99798 780 aaKnown RBP4.66□□□□□ -1.66
HDAC2-208ENST00000520746 MAN1C1Q9NR34 630 aa4.66□□□□□ -1.66
HDAC2-208ENST00000520746 FBXO34Q9NWN3 711 aa4.66□□□□□ -1.66
HDAC2-208ENST00000520746 CALCOCO1Q9P1Z2 691 aa4.66□□□□□ -1.66
HDAC2-208ENST00000520746 POLHQ9Y253 713 aa4.66□□□□□ -1.66
HDAC2-208ENST00000520746 PCDHA3Q9Y5H8 950 aa4.66□□□□□ -1.66
HDAC2-208ENST00000520746 ENTPD2Q9Y5L3 495 aa4.66□□□□□ -1.66
HDAC2-208ENST00000520746 ABCA10Q8WWZ4 1543 aa4.66□□□□□ -1.66
HDAC2-208ENST00000520746 TCRBV7S2A1N4TA0A589 114 aa4.65□□□□□ -1.67
HDAC2-208ENST00000520746 MANSC4A6NHS7 340 aaPredicted RBP4.65□□□□□ -1.67
HDAC2-208ENST00000520746 IKBKBO14920 756 aa4.65□□□□□ -1.67
HDAC2-208ENST00000520746 KIAA0391O15091 583 aaKnown RBP4.65□□□□□ -1.67
HDAC2-208ENST00000520746 SLC16A6O15403 523 aa4.65□□□□□ -1.67
HDAC2-208ENST00000520746 PEX1O43933 1283 aa4.65□□□□□ -1.67
HDAC2-208ENST00000520746 ALDH2P05091 517 aa4.65□□□□□ -1.67
HDAC2-208ENST00000520746 CELA2AP08217 269 aa4.65□□□□□ -1.67
HDAC2-208ENST00000520746 WT1P19544 449 aaPredicted RBP4.65□□□□□ -1.67
HDAC2-208ENST00000520746 MALP21145 153 aa4.65□□□□□ -1.67
HDAC2-208ENST00000520746 SMARCA1P28370 1054 aa4.65□□□□□ -1.67
HDAC2-208ENST00000520746 FOLR3P41439 243 aa4.65□□□□□ -1.67
HDAC2-208ENST00000520746 MAP2K6P52564 334 aa4.65□□□□□ -1.67
HDAC2-208ENST00000520746 SNAPC2Q13487 334 aa4.65□□□□□ -1.67
HDAC2-208ENST00000520746 SEM1Q6ZVN7 128 aa4.65□□□□□ -1.67
HDAC2-208ENST00000520746 UBE3BQ7Z3V4 1068 aa4.65□□□□□ -1.67
HDAC2-208ENST00000520746 GRASPQ7Z6J2 395 aaPredicted RBP4.65□□□□□ -1.67
HDAC2-208ENST00000520746 COLGALT2Q8IYK4 626 aa4.65□□□□□ -1.67
HDAC2-208ENST00000520746 DCBLD1Q8N8Z6 715 aa4.65□□□□□ -1.67
HDAC2-208ENST00000520746 PPP1R35Q8TAP8 253 aa4.65□□□□□ -1.67
HDAC2-208ENST00000520746 CGRRF1Q99675 332 aa4.65□□□□□ -1.67
HDAC2-208ENST00000520746 C11orf54Q9H0W9 315 aaPredicted RBP4.65□□□□□ -1.67
HDAC2-208ENST00000520746 CPNE5Q9HCH3 593 aa4.65□□□□□ -1.67
HDAC2-208ENST00000520746 HSFX1Q9UBD0 423 aa4.65□□□□□ -1.67
HDAC2-208ENST00000520746 SLC23A1Q9UHI7 598 aa4.65□□□□□ -1.67
HDAC2-208ENST00000520746 PTPRGP23470 1445 aa4.64□□□□□ -1.67
HDAC2-208ENST00000520746 ABCC10Q5T3U5 1492 aa4.64□□□□□ -1.67
HDAC2-208ENST00000520746 VSTM5A8MXK1 200 aa4.64□□□□□ -1.67
HDAC2-208ENST00000520746 ERC2O15083 957 aa4.64□□□□□ -1.67
HDAC2-208ENST00000520746 GRM6O15303 877 aa4.64□□□□□ -1.67
HDAC2-208ENST00000520746 ERN1O75460 977 aaKnown RBP4.64□□□□□ -1.67
HDAC2-208ENST00000520746 ARIH2O95376 493 aa4.64□□□□□ -1.67
HDAC2-208ENST00000520746 GPD1P21695 349 aa4.64□□□□□ -1.67
HDAC2-208ENST00000520746 HK3P52790 923 aa4.64□□□□□ -1.67
HDAC2-208ENST00000520746 NOGQ13253 232 aa4.64□□□□□ -1.67
HDAC2-208ENST00000520746 SF3B3Q15393 1217 aaKnown RBP4.64□□□□□ -1.67
HDAC2-208ENST00000520746 HSP90AB2PQ58FF8 381 aa4.64□□□□□ -1.67
HDAC2-208ENST00000520746 SLC4A10Q6U841 1118 aa4.64□□□□□ -1.67
HDAC2-208ENST00000520746 HEATR3Q7Z4Q2 680 aa4.64□□□□□ -1.67
HDAC2-208ENST00000520746 DENND1CQ8IV53 801 aa4.64□□□□□ -1.67
HDAC2-208ENST00000520746 ZBTB34Q8NCN2 500 aa4.64□□□□□ -1.67
HDAC2-208ENST00000520746 HASPINQ8TF76 798 aa4.64□□□□□ -1.67
HDAC2-208ENST00000520746 RUNDC1Q96C34 613 aa4.64□□□□□ -1.67
HDAC2-208ENST00000520746 MARS2Q96GW9 593 aaKnown RBP4.64□□□□□ -1.67
HDAC2-208ENST00000520746 LMBRD1Q9NUN5 540 aa4.64□□□□□ -1.67
HDAC2-208ENST00000520746 ABCF2Q9UG63 623 aa4.64□□□□□ -1.67
HDAC2-208ENST00000520746 NR2E3Q9Y5X4 410 aa4.64□□□□□ -1.67
HDAC2-208ENST00000520746 PBRM1Q86U86 1689 aa4.64□□□□□ -1.67
HDAC2-208ENST00000520746 NUP160Q12769 1436 aa4.63□□□□□ -1.67
HDAC2-208ENST00000520746 TRGV11A0A075B6L2 103 aa4.63□□□□□ -1.67
HDAC2-208ENST00000520746 H3BML4 177 aa4.63□□□□□ -1.67
HDAC2-208ENST00000520746 H3BUI4 141 aa4.63□□□□□ -1.67
HDAC2-208ENST00000520746 UBXN7O94888 489 aa4.63□□□□□ -1.67
HDAC2-208ENST00000520746 CD1AP06126 327 aa4.63□□□□□ -1.67
HDAC2-208ENST00000520746 SBK3P0C264 359 aa4.63□□□□□ -1.67
HDAC2-208ENST00000520746 MTHFD1P11586 935 aaKnown RBP4.63□□□□□ -1.67
HDAC2-208ENST00000520746 CKBP12277 381 aa4.63□□□□□ -1.67
HDAC2-208ENST00000520746 ITPKBP27987 946 aa4.63□□□□□ -1.67
HDAC2-208ENST00000520746 MAPK10P53779 464 aa4.63□□□□□ -1.67
HDAC2-208ENST00000520746 KRTAP10-7P60409 375 aaPredicted RBP4.63□□□□□ -1.67
HDAC2-208ENST00000520746 FLYWCH1Q4VC44 716 aa4.63□□□□□ -1.67
HDAC2-208ENST00000520746 PABPC1LQ4VXU2 614 aaKnown RBP4.63□□□□□ -1.67
HDAC2-208ENST00000520746 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.63□□□□□ -1.67
HDAC2-208ENST00000520746 PEG10Q86TG7 708 aaKnown RBP4.63□□□□□ -1.67
HDAC2-208ENST00000520746 PDPRQ8NCN5 879 aa4.63□□□□□ -1.67
HDAC2-208ENST00000520746 CDK5RAP3Q96JB5 506 aa4.63□□□□□ -1.67
HDAC2-208ENST00000520746 CCDC136Q96JN2 1154 aa4.63□□□□□ -1.67
HDAC2-208ENST00000520746 C8orf48Q96LL4 319 aa4.63□□□□□ -1.67
HDAC2-208ENST00000520746 GSTO2Q9H4Y5 243 aa4.63□□□□□ -1.67
HDAC2-208ENST00000520746 ARMT1Q9H993 441 aa4.63□□□□□ -1.67
HDAC2-208ENST00000520746 C1orf112Q9NSG2 853 aa4.63□□□□□ -1.67
HDAC2-208ENST00000520746 PNPOQ9NVS9 261 aa4.63□□□□□ -1.67
HDAC2-208ENST00000520746 OBP2AQ9NY56 170 aa4.63□□□□□ -1.67
HDAC2-208ENST00000520746 DDX20Q9UHI6 824 aaKnown RBP4.63□□□□□ -1.67
HDAC2-208ENST00000520746 STXBP5LQ9Y2K9 1186 aa4.63□□□□□ -1.67
HDAC2-208ENST00000520746 KDM6BO15054 1643 aa4.62□□□□□ -1.67
HDAC2-208ENST00000520746 F2RL2O00254 374 aa4.62□□□□□ -1.67
HDAC2-208ENST00000520746 YY2O15391 372 aa4.62□□□□□ -1.67
HDAC2-208ENST00000520746 ALAS1P13196 640 aa4.62□□□□□ -1.67
HDAC2-208ENST00000520746 HTR1BP28222 390 aa4.62□□□□□ -1.67
HDAC2-208ENST00000520746 NOMO3P69849 1222 aa4.62□□□□□ -1.67
HDAC2-208ENST00000520746 EZH2Q15910 746 aaKnown RBP4.62□□□□□ -1.67
HDAC2-208ENST00000520746 SRSF7Q16629 238 aaKnown RBP eCLIP4.62□□□□□ -1.67
HDAC2-208ENST00000520746 NOMO2Q5JPE7 1267 aa4.62□□□□□ -1.67
HDAC2-208ENST00000520746 DACT2Q5SW24 774 aa4.62□□□□□ -1.67
HDAC2-208ENST00000520746 KIAA1614Q5VZ46 1190 aa4.62□□□□□ -1.67
HDAC2-208ENST00000520746 VWA1Q6PCB0 445 aa4.62□□□□□ -1.67
HDAC2-208ENST00000520746 Q8NA96 180 aa4.62□□□□□ -1.67
HDAC2-208ENST00000520746 NLGN4YQ8NFZ3 816 aaPredicted RBP4.62□□□□□ -1.67
HDAC2-208ENST00000520746 KLHDC4Q8TBB5 520 aa4.62□□□□□ -1.67
HDAC2-208ENST00000520746 PACSIN1Q9BY11 444 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms