RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 ITIH5Q86UX2 942 aa18.68■□□□□ 0.58
UBE2D4-209ENST00000454428 USP13Q92995 863 aaPredicted RBP18.68■□□□□ 0.58
UBE2D4-209ENST00000454428 NTPCRQ9BSD7 190 aaKnown RBP18.68■□□□□ 0.58
UBE2D4-209ENST00000454428 PLEKHA5Q9HAU0 1116 aa18.68■□□□□ 0.58
UBE2D4-209ENST00000454428 TBX20Q9UMR3 447 aa18.68■□□□□ 0.58
UBE2D4-209ENST00000454428 THADAQ6YHU6 1953 aa18.68■□□□□ 0.58
UBE2D4-209ENST00000454428 PTPRDP23468 1912 aa18.67■□□□□ 0.58
UBE2D4-209ENST00000454428 PATE3B3GLJ2 98 aa18.67■□□□□ 0.58
UBE2D4-209ENST00000454428 RHOBTB1O94844 696 aa18.67■□□□□ 0.58
UBE2D4-209ENST00000454428 CYP3A5P20815 502 aa18.67■□□□□ 0.58
UBE2D4-209ENST00000454428 CDC25CP30307 473 aa18.67■□□□□ 0.58
UBE2D4-209ENST00000454428 TNFSF9P41273 254 aa18.67■□□□□ 0.58
UBE2D4-209ENST00000454428 FXR2P51116 673 aaKnown RBP eCLIP18.67■□□□□ 0.58
UBE2D4-209ENST00000454428 DAB2IPQ5VWQ8 1189 aa18.67■□□□□ 0.58
UBE2D4-209ENST00000454428 RINT1Q6NUQ1 792 aa18.67■□□□□ 0.58
UBE2D4-209ENST00000454428 DSTYKQ6XUX3 929 aa18.67■□□□□ 0.58
UBE2D4-209ENST00000454428 C1orf186Q6ZWK4 172 aa18.67■□□□□ 0.58
UBE2D4-209ENST00000454428 TMEM161BQ8NDZ6 487 aa18.67■□□□□ 0.58
UBE2D4-209ENST00000454428 RPLP0P6Q8NHW5 317 aa18.67■□□□□ 0.58
UBE2D4-209ENST00000454428 KIF12Q96FN5 646 aa18.67■□□□□ 0.58
UBE2D4-209ENST00000454428 UBQLN1Q9UMX0 589 aaKnown RBP18.67■□□□□ 0.58
UBE2D4-209ENST00000454428 MYH11P35749 1972 aa18.66■□□□□ 0.58
UBE2D4-209ENST00000454428 SCN1AP35498 2009 aa18.66■□□□□ 0.58
UBE2D4-209ENST00000454428 CACNA1EQ15878 2313 aa18.66■□□□□ 0.58
UBE2D4-209ENST00000454428 FAM189A1O60320 539 aa18.66■□□□□ 0.58
UBE2D4-209ENST00000454428 APBB3O95704 486 aa18.66■□□□□ 0.58
UBE2D4-209ENST00000454428 DRD1P21728 446 aa18.66■□□□□ 0.58
UBE2D4-209ENST00000454428 LILRA4P59901 499 aa18.66■□□□□ 0.58
UBE2D4-209ENST00000454428 GUCY1B3Q02153 619 aa18.66■□□□□ 0.58
UBE2D4-209ENST00000454428 ST3GAL1Q11201 340 aa18.66■□□□□ 0.58
UBE2D4-209ENST00000454428 ORC2Q13416 577 aaPredicted RBP18.66■□□□□ 0.58
UBE2D4-209ENST00000454428 DMC1Q14565 340 aa18.66■□□□□ 0.58
UBE2D4-209ENST00000454428 KARSQ15046 597 aaKnown RBP18.66■□□□□ 0.58
UBE2D4-209ENST00000454428 PMS2CLQ68D20 193 aa18.66■□□□□ 0.58
UBE2D4-209ENST00000454428 KCNK18Q7Z418 384 aa18.66■□□□□ 0.58
UBE2D4-209ENST00000454428 SENP8Q96LD8 212 aa18.66■□□□□ 0.58
UBE2D4-209ENST00000454428 SEPT5Q99719 369 aaPredicted RBP18.66■□□□□ 0.58
UBE2D4-209ENST00000454428 TMEM9BQ9NQ34 198 aa18.66■□□□□ 0.58
UBE2D4-209ENST00000454428 LRWD1Q9UFC0 647 aa18.66■□□□□ 0.58
UBE2D4-209ENST00000454428 INVSQ9Y283 1065 aa18.66■□□□□ 0.58
UBE2D4-209ENST00000454428 TNRC6BQ9UPQ9 1833 aaKnown RBP18.65■□□□□ 0.58
UBE2D4-209ENST00000454428 GCN1Q92616 2671 aaKnown RBP18.65■□□□□ 0.58
UBE2D4-209ENST00000454428 LACTBL1A8MY62 500 aa18.65■□□□□ 0.58
UBE2D4-209ENST00000454428 F11P03951 625 aa18.65■□□□□ 0.58
UBE2D4-209ENST00000454428 CLTAP09496 248 aa18.65■□□□□ 0.58
UBE2D4-209ENST00000454428 MAPTP10636 758 aaKnown RBP18.65■□□□□ 0.58
UBE2D4-209ENST00000454428 HMGA1P17096 107 aaKnown RBP18.65■□□□□ 0.58
UBE2D4-209ENST00000454428 NMT1P30419 496 aaKnown RBP18.65■□□□□ 0.58
UBE2D4-209ENST00000454428 GJA4P35212 333 aa18.65■□□□□ 0.58
UBE2D4-209ENST00000454428 SLC39A12Q504Y0 691 aa18.65■□□□□ 0.58
UBE2D4-209ENST00000454428 ZPBP2Q6X784 338 aa18.65■□□□□ 0.58
UBE2D4-209ENST00000454428 MAB21L3Q8N8X9 362 aa18.65■□□□□ 0.58
UBE2D4-209ENST00000454428 IGSF22Q8N9C0 903 aa18.65■□□□□ 0.58
UBE2D4-209ENST00000454428 GIPC2Q8TF65 315 aa18.65■□□□□ 0.58
UBE2D4-209ENST00000454428 SPIRE2Q8WWL2 714 aa18.65■□□□□ 0.58
UBE2D4-209ENST00000454428 ZCCHC14Q8WYQ9 949 aaKnown RBP18.65■□□□□ 0.58
UBE2D4-209ENST00000454428 DRC1Q96MC2 740 aa18.65■□□□□ 0.58
UBE2D4-209ENST00000454428 P2RY13Q9BPV8 354 aa18.65■□□□□ 0.58
UBE2D4-209ENST00000454428 ZCWPW1Q9H0M4 648 aa18.65■□□□□ 0.58
UBE2D4-209ENST00000454428 C17orf75Q9HAS0 396 aa18.65■□□□□ 0.58
UBE2D4-209ENST00000454428 PCNX2A6NKB5 2137 aa18.65■□□□□ 0.58
UBE2D4-209ENST00000454428 PP2D1A8MPX8 630 aa18.64■□□□□ 0.57
UBE2D4-209ENST00000454428 CLDN3O15551 220 aa18.64■□□□□ 0.57
UBE2D4-209ENST00000454428 ADRB2P07550 413 aa18.64■□□□□ 0.57
UBE2D4-209ENST00000454428 BCKDHBP21953 392 aa18.64■□□□□ 0.57
UBE2D4-209ENST00000454428 TUFMP49411 452 aaKnown RBP18.64■□□□□ 0.57
UBE2D4-209ENST00000454428 NLRP12P59046 1061 aa18.64■□□□□ 0.57
UBE2D4-209ENST00000454428 IRX4P78413 519 aa18.64■□□□□ 0.57
UBE2D4-209ENST00000454428 TRIM29Q14134 588 aa18.64■□□□□ 0.57
UBE2D4-209ENST00000454428 NBR1Q14596 966 aa18.64■□□□□ 0.57
UBE2D4-209ENST00000454428 ENOX2Q16206 610 aaKnown RBP18.64■□□□□ 0.57
UBE2D4-209ENST00000454428 MGAT5BQ3V5L5 792 aa18.64■□□□□ 0.57
UBE2D4-209ENST00000454428 ARMCX5Q6P1M9 558 aa18.64■□□□□ 0.57
UBE2D4-209ENST00000454428 LRRTM3Q86VH5 581 aa18.64■□□□□ 0.57
UBE2D4-209ENST00000454428 DEFB124Q8NES8 71 aa18.64■□□□□ 0.57
UBE2D4-209ENST00000454428 SNX29Q8TEQ0 813 aa18.64■□□□□ 0.57
UBE2D4-209ENST00000454428 TDP1Q9NUW8 608 aa18.64■□□□□ 0.57
UBE2D4-209ENST00000454428 LHX6Q9UPM6 363 aa18.64■□□□□ 0.57
UBE2D4-209ENST00000454428 ANTXRLA6NF34 631 aa18.63■□□□□ 0.57
UBE2D4-209ENST00000454428 SOBPA7XYQ1 873 aa18.63■□□□□ 0.57
UBE2D4-209ENST00000454428 KHNYNO15037 678 aaKnown RBP18.63■□□□□ 0.57
UBE2D4-209ENST00000454428 CYP11A1P05108 521 aa18.63■□□□□ 0.57
UBE2D4-209ENST00000454428 ODC1P11926 461 aa18.63■□□□□ 0.57
UBE2D4-209ENST00000454428 GBP1P32455 592 aa18.63■□□□□ 0.57
UBE2D4-209ENST00000454428 STRN3Q13033 797 aa18.63■□□□□ 0.57
UBE2D4-209ENST00000454428 PDIA5Q14554 519 aa18.63■□□□□ 0.57
UBE2D4-209ENST00000454428 FBXO43Q4G163 708 aa18.63■□□□□ 0.57
UBE2D4-209ENST00000454428 TTC38Q5R3I4 469 aa18.63■□□□□ 0.57
UBE2D4-209ENST00000454428 SPATA1Q5VX52 437 aa18.63■□□□□ 0.57
UBE2D4-209ENST00000454428 TXNDC8Q6A555 127 aa18.63■□□□□ 0.57
UBE2D4-209ENST00000454428 KIAA1211LQ6NV74 962 aa18.63■□□□□ 0.57
UBE2D4-209ENST00000454428 STKLD1Q8NE28 680 aa18.63■□□□□ 0.57
UBE2D4-209ENST00000454428 GCNAQ96QF7 691 aa18.63■□□□□ 0.57
UBE2D4-209ENST00000454428 DNM3Q9UQ16 869 aa18.63■□□□□ 0.57
UBE2D4-209ENST00000454428 SETXQ7Z333 2677 aaKnown RBP18.63■□□□□ 0.57
UBE2D4-209ENST00000454428 IGSF10Q6WRI0 2623 aa18.62■□□□□ 0.57
UBE2D4-209ENST00000454428 PIRO00625 290 aa18.62■□□□□ 0.57
UBE2D4-209ENST00000454428 HYAL3O43820 417 aaPredicted RBP18.62■□□□□ 0.57
UBE2D4-209ENST00000454428 HAPLN1P10915 354 aaPredicted RBP18.62■□□□□ 0.57
UBE2D4-209ENST00000454428 AVPR1AP37288 418 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms