RNA–Protein interactions for RNA: ENST00000357450.8

SMC1B-201, Transcript of structural maintenance of chromosomes 1B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMC1B, Length 4,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-201ENST00000357450 COL4A3Q01955 1670 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 A0A1W2PRU2 124 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 SHISA7A6NL88 538 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 OPLAHO14841 1288 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 RRP9O43818 475 aaKnown RBP4.05□□□□□ -1.76
SMC1B-201ENST00000357450 SMC2O95347 1197 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 THBS1P07996 1170 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 OR4Q2P0C623 313 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 ACAT1P24752 427 aaKnown RBP4.05□□□□□ -1.76
SMC1B-201ENST00000357450 PCSK1P29120 753 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 PIK3CAP42336 1068 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 CXCL12P48061 93 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 ERVFC1P60507 584 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 SP2Q02086 613 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 KARSQ15046 597 aaKnown RBP4.05□□□□□ -1.76
SMC1B-201ENST00000357450 WDR72Q3MJ13 1102 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 C10orf120Q5SQS8 335 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 TSSK4Q6SA08 328 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 BTNL9Q6UXG8 535 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 USP49Q70CQ1 688 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 ZNF410Q86VK4 478 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 ADHFE1Q8IWW8 467 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 SAMD3Q8N6K7 520 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 TC2NQ8N9U0 490 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 ATAD1Q8NBU5 361 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 SLC32A1Q9H598 525 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 GOLGA2P5Q9HBQ8 144 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 CFAP45Q9UL16 551 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 SYNPO2Q9UMS6 1093 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 KIAA1549LQ6ZVL6 1849 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 LOC102724159A0A0B4J2E5 919 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 GSTTP1A0A1W2PQM5 241 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 FAM86B1E9PN63 330 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 CYB561D2O14569 222 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 HIP1RO75146 1068 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 FAM86B2P0C5J1 330 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 HOXD13P35453 343 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 SLC11A1P49279 550 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 NOVA1P51513 510 aaKnown RBP4.05□□□□□ -1.76
SMC1B-201ENST00000357450 GPC3P51654 580 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 RPL10AP62906 217 aaKnown RBP4.05□□□□□ -1.76
SMC1B-201ENST00000357450 KRT85P78386 507 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 KDSRQ06136 332 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 SPEM2Q0P670 501 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 CCDC173Q0VFZ6 552 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 PWP2Q15269 919 aaKnown RBP4.05□□□□□ -1.76
SMC1B-201ENST00000357450 HSP90AA4PQ58FG1 418 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 ZNF667Q5HYK9 610 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 RNF43Q68DV7 783 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 FRMD5Q7Z6J6 570 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 DDI1Q8WTU0 396 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 RSAD2Q8WXG1 361 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 RUBCNQ92622 972 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 FBXO32Q969P5 355 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 NAP1L5Q96NT1 182 aaPredicted RBP4.05□□□□□ -1.76
SMC1B-201ENST00000357450 CSRNP2Q9H175 543 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 OSBPL2Q9H1P3 480 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 NAGPAQ9UK23 515 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 PIAS3Q9Y6X2 628 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 PODXLO00592 558 aa4.04□□□□□ -1.76
SMC1B-201ENST00000357450 RNASEH1O60930 286 aaKnown RBP4.04□□□□□ -1.76
SMC1B-201ENST00000357450 LMNAP02545 664 aaKnown RBP4.04□□□□□ -1.76
SMC1B-201ENST00000357450 PLA2G4BP0C869 781 aa4.04□□□□□ -1.76
SMC1B-201ENST00000357450 COL6A1P12109 1028 aa4.04□□□□□ -1.76
SMC1B-201ENST00000357450 RPL13P26373 211 aaKnown RBP4.04□□□□□ -1.76
SMC1B-201ENST00000357450 NMT1P30419 496 aaKnown RBP4.04□□□□□ -1.76
SMC1B-201ENST00000357450 AVPR2P30518 371 aa4.04□□□□□ -1.76
SMC1B-201ENST00000357450 TUFMP49411 452 aaKnown RBP4.04□□□□□ -1.76
SMC1B-201ENST00000357450 SLC20A2Q08357 652 aa4.04□□□□□ -1.76
SMC1B-201ENST00000357450 TWF1Q12792 350 aa4.04□□□□□ -1.76
SMC1B-201ENST00000357450 NOLC1Q14978 699 aaKnown RBP eCLIP4.04□□□□□ -1.76
SMC1B-201ENST00000357450 USP39Q53GS9 565 aaKnown RBP4.04□□□□□ -1.76
SMC1B-201ENST00000357450 TDRD10Q5VZ19 366 aaKnown RBP4.04□□□□□ -1.76
SMC1B-201ENST00000357450 SLFN12LQ6IEE8 588 aa4.04□□□□□ -1.76
SMC1B-201ENST00000357450 PDE12Q6L8Q7 609 aaKnown RBP4.04□□□□□ -1.76
SMC1B-201ENST00000357450 PDXDC1Q6P996 788 aa4.04□□□□□ -1.76
SMC1B-201ENST00000357450 PLPPR4Q7Z2D5 763 aa4.04□□□□□ -1.76
SMC1B-201ENST00000357450 FAM228AQ86W67 206 aa4.04□□□□□ -1.76
SMC1B-201ENST00000357450 JAMLQ86YT9 394 aa4.04□□□□□ -1.76
SMC1B-201ENST00000357450 KIF18AQ8NI77 898 aa4.04□□□□□ -1.76
SMC1B-201ENST00000357450 NOX5Q96PH1 765 aa4.04□□□□□ -1.76
SMC1B-201ENST00000357450 PLVAPQ9BX97 442 aa4.04□□□□□ -1.76
SMC1B-201ENST00000357450 CLSTN2Q9H4D0 955 aa4.04□□□□□ -1.76
SMC1B-201ENST00000357450 RIOX1Q9H6W3 641 aa4.04□□□□□ -1.76
SMC1B-201ENST00000357450 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.04□□□□□ -1.76
SMC1B-201ENST00000357450 DNAJB4Q9UDY4 337 aa4.04□□□□□ -1.76
SMC1B-201ENST00000357450 SLC12A6Q9UHW9 1150 aa4.04□□□□□ -1.76
SMC1B-201ENST00000357450 CPSF3Q9UKF6 684 aaKnown RBP4.04□□□□□ -1.76
SMC1B-201ENST00000357450 HCN2Q9UL51 889 aa4.04□□□□□ -1.76
SMC1B-201ENST00000357450 TDRD15B5MCY1 1934 aaKnown RBP4.04□□□□□ -1.76
SMC1B-201ENST00000357450 ZBTB39O15060 712 aa4.04□□□□□ -1.76
SMC1B-201ENST00000357450 CHRNA1P02708 482 aa4.04□□□□□ -1.76
SMC1B-201ENST00000357450 TPM1P09493 284 aa4.04□□□□□ -1.76
SMC1B-201ENST00000357450 GNSP15586 552 aa4.04□□□□□ -1.76
SMC1B-201ENST00000357450 SREBF1P36956 1147 aa4.04□□□□□ -1.76
SMC1B-201ENST00000357450 TAF6P49848 677 aa4.04□□□□□ -1.76
SMC1B-201ENST00000357450 GUCY2FP51841 1108 aa4.04□□□□□ -1.76
SMC1B-201ENST00000357450 MAP3K10Q02779 954 aa4.04□□□□□ -1.76
SMC1B-201ENST00000357450 TUSC3Q13454 348 aa4.04□□□□□ -1.76
SMC1B-201ENST00000357450 MCM6Q14566 821 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms