RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 FOXN3O00409 490 aaPredicted RBP17.08■□□□□ 0.32
CCDC8-201ENST00000307522 FOSP01100 380 aaPredicted RBP17.08■□□□□ 0.32
CCDC8-201ENST00000307522 ENO1P06733 434 aaKnown RBP17.08■□□□□ 0.32
CCDC8-201ENST00000307522 CCDC15Q0P6D6 951 aa17.08■□□□□ 0.32
CCDC8-201ENST00000307522 LSAMPQ13449 338 aa17.08■□□□□ 0.32
CCDC8-201ENST00000307522 ARHGEF16Q5VV41 709 aa17.08■□□□□ 0.32
CCDC8-201ENST00000307522 NAT14Q8WUY8 206 aa17.08■□□□□ 0.32
CCDC8-201ENST00000307522 STARD13Q9Y3M8 1113 aa17.08■□□□□ 0.32
CCDC8-201ENST00000307522 SORBS2O94875 1100 aaKnown RBP17.07■□□□□ 0.32
CCDC8-201ENST00000307522 TMEM253P0C7T8 217 aa17.07■□□□□ 0.32
CCDC8-201ENST00000307522 ESRRAP11474 423 aaPredicted RBP17.07■□□□□ 0.32
CCDC8-201ENST00000307522 SOX5P35711 763 aa17.07■□□□□ 0.32
CCDC8-201ENST00000307522 EFTUD2Q15029 972 aaKnown RBP eCLIP17.07■□□□□ 0.32
CCDC8-201ENST00000307522 CBWD6Q4V339 395 aa17.07■□□□□ 0.32
CCDC8-201ENST00000307522 CBWD3Q5JTY5 395 aa17.07■□□□□ 0.32
CCDC8-201ENST00000307522 CBWD5Q5RIA9 395 aa17.07■□□□□ 0.32
CCDC8-201ENST00000307522 PPP1R21Q6ZMI0 780 aa17.07■□□□□ 0.32
CCDC8-201ENST00000307522 TRMT10CQ7L0Y3 403 aaKnown RBP17.07■□□□□ 0.32
CCDC8-201ENST00000307522 DTNBP1Q96EV8 351 aa17.07■□□□□ 0.32
CCDC8-201ENST00000307522 CENPKQ9BS16 269 aa17.07■□□□□ 0.32
CCDC8-201ENST00000307522 RNF146Q9NTX7 359 aa17.07■□□□□ 0.32
CCDC8-201ENST00000307522 PCYOX1Q9UHG3 505 aa17.07■□□□□ 0.32
CCDC8-201ENST00000307522 SYNGAP1Q96PV0 1343 aa17.07■□□□□ 0.32
CCDC8-201ENST00000307522 KDM3AQ9Y4C1 1321 aa17.07■□□□□ 0.32
CCDC8-201ENST00000307522 TNS1Q9HBL0 1735 aaKnown RBP17.07■□□□□ 0.32
CCDC8-201ENST00000307522 DRG2P55039 364 aaKnown RBP17.07■□□□□ 0.32
CCDC8-201ENST00000307522 MTMR1Q13613 665 aa17.07■□□□□ 0.32
CCDC8-201ENST00000307522 SPARCL1Q14515 664 aa17.07■□□□□ 0.32
CCDC8-201ENST00000307522 CTC1Q2NKJ3 1217 aa17.07■□□□□ 0.32
CCDC8-201ENST00000307522 COBLL1Q53SF7 1204 aa17.07■□□□□ 0.32
CCDC8-201ENST00000307522 ALYREFQ86V81 257 aaKnown RBP17.07■□□□□ 0.32
CCDC8-201ENST00000307522 SYTL5Q8TDW5 730 aaPredicted RBP17.07■□□□□ 0.32
CCDC8-201ENST00000307522 CLEC4DQ8WXI8 215 aa17.07■□□□□ 0.32
CCDC8-201ENST00000307522 KAT5Q92993 513 aa17.07■□□□□ 0.32
CCDC8-201ENST00000307522 SHCBP1LQ9BZQ2 653 aa17.07■□□□□ 0.32
CCDC8-201ENST00000307522 SYNCQ9H7C4 482 aa17.07■□□□□ 0.32
CCDC8-201ENST00000307522 VPS37BQ9H9H4 285 aa17.07■□□□□ 0.32
CCDC8-201ENST00000307522 PGAP2Q9UHJ9 254 aa17.07■□□□□ 0.32
CCDC8-201ENST00000307522 FEM1BQ9UK73 627 aa17.07■□□□□ 0.32
CCDC8-201ENST00000307522 ARHGEF35A5YM69 484 aa17.06■□□□□ 0.32
CCDC8-201ENST00000307522 CYP26A1O43174 497 aa17.06■□□□□ 0.32
CCDC8-201ENST00000307522 PSMD10O75832 226 aa17.06■□□□□ 0.32
CCDC8-201ENST00000307522 CTNNA2P26232 953 aa17.06■□□□□ 0.32
CCDC8-201ENST00000307522 NT5C2P49902 561 aa17.06■□□□□ 0.32
CCDC8-201ENST00000307522 JAM2P57087 298 aa17.06■□□□□ 0.32
CCDC8-201ENST00000307522 SLC30A5Q8TAD4 765 aa17.06■□□□□ 0.32
CCDC8-201ENST00000307522 THTPAQ9BU02 230 aa17.06■□□□□ 0.32
CCDC8-201ENST00000307522 PCDHA2Q9Y5H9 948 aa17.06■□□□□ 0.32
CCDC8-201ENST00000307522 CDH16O75309 829 aa17.06■□□□□ 0.32
CCDC8-201ENST00000307522 NR3C1P04150 777 aa17.06■□□□□ 0.32
CCDC8-201ENST00000307522 PRKCIP41743 596 aa17.06■□□□□ 0.32
CCDC8-201ENST00000307522 CNTN2Q02246 1040 aa17.06■□□□□ 0.32
CCDC8-201ENST00000307522 CDC16Q13042 620 aa17.06■□□□□ 0.32
CCDC8-201ENST00000307522 MARK2Q7KZI7 788 aaKnown RBP17.06■□□□□ 0.32
CCDC8-201ENST00000307522 FAM178BQ8IXR5 827 aa17.06■□□□□ 0.32
CCDC8-201ENST00000307522 SYT2Q8N9I0 419 aaPredicted RBP17.06■□□□□ 0.32
CCDC8-201ENST00000307522 PPP1R13LQ8WUF5 828 aa17.06■□□□□ 0.32
CCDC8-201ENST00000307522 ZNF75CPQ92670 426 aaPredicted RBP17.06■□□□□ 0.32
CCDC8-201ENST00000307522 CCDC124Q96CT7 223 aaKnown RBP17.06■□□□□ 0.32
CCDC8-201ENST00000307522 SMYD3Q9H7B4 428 aa17.06■□□□□ 0.32
CCDC8-201ENST00000307522 SAYSD1Q9NPB0 183 aa17.06■□□□□ 0.32
CCDC8-201ENST00000307522 KLHL11Q9NVR0 708 aa17.06■□□□□ 0.32
CCDC8-201ENST00000307522 MARCOQ9UEW3 520 aaPredicted RBP17.06■□□□□ 0.32
CCDC8-201ENST00000307522 MTUS1Q9ULD2 1270 aa17.06■□□□□ 0.32
CCDC8-201ENST00000307522 CYP3A7-CYP3A51PA0A087WV96 503 aa17.06■□□□□ 0.32
CCDC8-201ENST00000307522 CCDC22O60826 627 aa17.06■□□□□ 0.32
CCDC8-201ENST00000307522 ASLP04424 464 aa17.06■□□□□ 0.32
CCDC8-201ENST00000307522 ZSCAN5DPP0CG00 497 aa17.06■□□□□ 0.32
CCDC8-201ENST00000307522 PLS3P13797 630 aa17.06■□□□□ 0.32
CCDC8-201ENST00000307522 CYP3A7P24462 503 aa17.06■□□□□ 0.32
CCDC8-201ENST00000307522 CDK7P50613 346 aa17.06■□□□□ 0.32
CCDC8-201ENST00000307522 TGFB2P61812 414 aa17.06■□□□□ 0.32
CCDC8-201ENST00000307522 DSG1Q02413 1049 aa17.06■□□□□ 0.32
CCDC8-201ENST00000307522 FAM83AQ86UY5 434 aa17.06■□□□□ 0.32
CCDC8-201ENST00000307522 ANKRD35Q8N283 1001 aa17.06■□□□□ 0.32
CCDC8-201ENST00000307522 HSPBAP1Q96EW2 488 aa17.06■□□□□ 0.32
CCDC8-201ENST00000307522 KIAA1586Q9HCI6 787 aa17.06■□□□□ 0.32
CCDC8-201ENST00000307522 PCDHGB4Q9UN71 923 aa17.06■□□□□ 0.32
CCDC8-201ENST00000307522 PCDHGB5Q9Y5G0 923 aa17.06■□□□□ 0.32
CCDC8-201ENST00000307522 A0A0J9YVX5 310 aa17.05■□□□□ 0.32
CCDC8-201ENST00000307522 ZNF862O60290 1169 aa17.05■□□□□ 0.32
CCDC8-201ENST00000307522 KITP10721 976 aa17.05■□□□□ 0.32
CCDC8-201ENST00000307522 ATF2P15336 505 aa17.05■□□□□ 0.32
CCDC8-201ENST00000307522 NOP14P78316 857 aaKnown RBP17.05■□□□□ 0.32
CCDC8-201ENST00000307522 PLOD1Q02809 727 aaPredicted RBP17.05■□□□□ 0.32
CCDC8-201ENST00000307522 ZRSR2Q15696 482 aaKnown RBP17.05■□□□□ 0.32
CCDC8-201ENST00000307522 ANKMY2Q8IV38 441 aa17.05■□□□□ 0.32
CCDC8-201ENST00000307522 PRPF31Q8WWY3 499 aaKnown RBP17.05■□□□□ 0.32
CCDC8-201ENST00000307522 LENG1Q96BZ8 264 aaPredicted RBP17.05■□□□□ 0.32
CCDC8-201ENST00000307522 HSD17B14Q9BPX1 270 aa17.05■□□□□ 0.32
CCDC8-201ENST00000307522 ECSITQ9BQ95 431 aa17.05■□□□□ 0.32
CCDC8-201ENST00000307522 NENFQ9UMX5 172 aa17.05■□□□□ 0.32
CCDC8-201ENST00000307522 A0A0A6YYK5 440 aaPredicted RBP17.05■□□□□ 0.32
CCDC8-201ENST00000307522 B2RBV5 119 aa17.05■□□□□ 0.32
CCDC8-201ENST00000307522 EYA4O95677 639 aa17.05■□□□□ 0.32
CCDC8-201ENST00000307522 LMNAP02545 664 aaKnown RBP17.05■□□□□ 0.32
CCDC8-201ENST00000307522 ICAM1P05362 532 aa17.05■□□□□ 0.32
CCDC8-201ENST00000307522 SEPT7Q16181 437 aaKnown RBP17.05■□□□□ 0.32
CCDC8-201ENST00000307522 FAM102BQ5T8I3 360 aa17.05■□□□□ 0.32
CCDC8-201ENST00000307522 CROCCP2Q86T23 111 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms