RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 Acbd3Q8BMP6 525 aa6.59□□□□□ -1.35
Lig4-202ENSMUST00000170033 Trim47Q8C0E3 641 aa6.59□□□□□ -1.35
Lig4-202ENSMUST00000170033 Pnma1Q8C1C8 353 aa6.59□□□□□ -1.35
Lig4-202ENSMUST00000170033 C8aQ8K182 587 aa6.59□□□□□ -1.35
Lig4-202ENSMUST00000170033 Cdhr1Q8VHP6 859 aa6.59□□□□□ -1.35
Lig4-202ENSMUST00000170033 Ndfip2Q91ZP6 311 aa6.59□□□□□ -1.35
Lig4-202ENSMUST00000170033 PawrQ925B0 333 aa6.59□□□□□ -1.35
Lig4-202ENSMUST00000170033 StambpQ9CQ26 424 aa6.59□□□□□ -1.35
Lig4-202ENSMUST00000170033 Atp6v1e2Q9D593 226 aa6.59□□□□□ -1.35
Lig4-202ENSMUST00000170033 Nsmce1Q9D720 266 aa6.59□□□□□ -1.35
Lig4-202ENSMUST00000170033 Cpb2Q9JHH6 422 aa6.59□□□□□ -1.35
Lig4-202ENSMUST00000170033 Tmod2Q9JKK7 351 aa6.59□□□□□ -1.35
Lig4-202ENSMUST00000170033 Net1Q9Z206 595 aa6.59□□□□□ -1.35
Lig4-202ENSMUST00000170033 FscbA1EGX6 1074 aa6.59□□□□□ -1.35
Lig4-202ENSMUST00000170033 Pkd2l1A2A259 760 aa6.59□□□□□ -1.35
Lig4-202ENSMUST00000170033 Gm16430A6X8J1 155 aa6.59□□□□□ -1.35
Lig4-202ENSMUST00000170033 JrklB2RRL2 523 aa6.59□□□□□ -1.35
Lig4-202ENSMUST00000170033 SelenovD3YXG1 328 aa6.59□□□□□ -1.35
Lig4-202ENSMUST00000170033 Stra6O70491 670 aa6.59□□□□□ -1.35
Lig4-202ENSMUST00000170033 Ets2P15037 468 aa6.59□□□□□ -1.35
Lig4-202ENSMUST00000170033 LxnP70202 222 aa6.59□□□□□ -1.35
Lig4-202ENSMUST00000170033 GcgrQ61606 485 aa6.59□□□□□ -1.35
Lig4-202ENSMUST00000170033 Zcchc2Q69ZB8 1166 aa6.59□□□□□ -1.35
Lig4-202ENSMUST00000170033 Xlr3bQ6P205 226 aa6.59□□□□□ -1.35
Lig4-202ENSMUST00000170033 Arhgef18Q6P9R4 1021 aa6.59□□□□□ -1.35
Lig4-202ENSMUST00000170033 Trim65Q8BFW4 522 aa6.59□□□□□ -1.35
Lig4-202ENSMUST00000170033 Dupd1Q8BK84 215 aa6.59□□□□□ -1.35
Lig4-202ENSMUST00000170033 Als2cr12Q8BVM7 383 aa6.59□□□□□ -1.35
Lig4-202ENSMUST00000170033 Q8C6G1 249 aa6.59□□□□□ -1.35
Lig4-202ENSMUST00000170033 Gatad2aQ8CHY6 629 aaKnown RBP6.59□□□□□ -1.35
Lig4-202ENSMUST00000170033 Pkn3Q8K045 878 aa6.59□□□□□ -1.35
Lig4-202ENSMUST00000170033 Mtss1Q8R1S4 759 aa6.59□□□□□ -1.35
Lig4-202ENSMUST00000170033 Defb15Q8R2I5 79 aa6.59□□□□□ -1.35
Lig4-202ENSMUST00000170033 Q99KU6 348 aa6.59□□□□□ -1.35
Lig4-202ENSMUST00000170033 Tnpo2Q99LG2 887 aaKnown RBP6.59□□□□□ -1.35
Lig4-202ENSMUST00000170033 Slxl1Q9D515 155 aa6.59□□□□□ -1.35
Lig4-202ENSMUST00000170033 Rpap3Q9D706 660 aa6.59□□□□□ -1.35
Lig4-202ENSMUST00000170033 PycardQ9EPB4 193 aa6.59□□□□□ -1.35
Lig4-202ENSMUST00000170033 PlekQ9JHK5 350 aaKnown RBP6.59□□□□□ -1.35
Lig4-202ENSMUST00000170033 FibpQ9JI19 357 aa6.59□□□□□ -1.35
Lig4-202ENSMUST00000170033 Zscan4-ps3A0A1B0GRH6 506 aa6.59□□□□□ -1.36
Lig4-202ENSMUST00000170033 Zscan4-ps2A0A1C7CYU6 506 aa6.59□□□□□ -1.36
Lig4-202ENSMUST00000170033 Fam171a1A2ATK9 892 aa6.59□□□□□ -1.36
Lig4-202ENSMUST00000170033 Atp2c2A7L9Z8 944 aa6.59□□□□□ -1.36
Lig4-202ENSMUST00000170033 Gm4758L7N258 96 aa6.59□□□□□ -1.36
Lig4-202ENSMUST00000170033 Has3O08650 554 aa6.59□□□□□ -1.36
Lig4-202ENSMUST00000170033 Foxk1P42128 719 aaKnown RBP6.59□□□□□ -1.36
Lig4-202ENSMUST00000170033 Zfp953Q3UPV7 304 aa6.59□□□□□ -1.36
Lig4-202ENSMUST00000170033 P3h1Q3V1T4 739 aa6.59□□□□□ -1.36
Lig4-202ENSMUST00000170033 Zdhhc18Q5Y5T2 380 aa6.59□□□□□ -1.36
Lig4-202ENSMUST00000170033 JrkQ60976 557 aa6.59□□□□□ -1.36
Lig4-202ENSMUST00000170033 Cyfip1Q7TMB8 1253 aa6.59□□□□□ -1.36
Lig4-202ENSMUST00000170033 Usp6nlQ80XC3 819 aa6.59□□□□□ -1.36
Lig4-202ENSMUST00000170033 Man2a2Q8BRK9 1152 aa6.59□□□□□ -1.36
Lig4-202ENSMUST00000170033 AsphQ8BSY0 741 aa6.59□□□□□ -1.36
Lig4-202ENSMUST00000170033 Ccdc169Q8BXX9 214 aa6.59□□□□□ -1.36
Lig4-202ENSMUST00000170033 Usp20Q8C6M1 916 aa6.59□□□□□ -1.36
Lig4-202ENSMUST00000170033 A430089I19RikQ8C9W1 407 aa6.59□□□□□ -1.36
Lig4-202ENSMUST00000170033 Lonp1Q8CGK3 949 aaKnown RBP6.59□□□□□ -1.36
Lig4-202ENSMUST00000170033 Mkl1Q8K4J6 964 aa6.59□□□□□ -1.36
Lig4-202ENSMUST00000170033 OtoaQ8K561 1137 aa6.59□□□□□ -1.36
Lig4-202ENSMUST00000170033 Spats2lQ91WJ7 558 aaKnown RBP6.59□□□□□ -1.36
Lig4-202ENSMUST00000170033 Cnot8Q9D8X5 292 aa6.59□□□□□ -1.36
Lig4-202ENSMUST00000170033 Ptf1aQ9QX98 324 aa6.59□□□□□ -1.36
Lig4-202ENSMUST00000170033 PhipQ8VDD9 1821 aaKnown RBP6.58□□□□□ -1.36
Lig4-202ENSMUST00000170033 Plekhg4A0A1L1SU27 1217 aa6.58□□□□□ -1.36
Lig4-202ENSMUST00000170033 Gm13084A2A8N0 494 aa6.58□□□□□ -1.36
Lig4-202ENSMUST00000170033 Klhdc7aA2APT9 773 aa6.58□□□□□ -1.36
Lig4-202ENSMUST00000170033 R3hdm1E9Q9Q2 1135 aaKnown RBP6.58□□□□□ -1.36
Lig4-202ENSMUST00000170033 Efna5O08543 228 aa6.58□□□□□ -1.36
Lig4-202ENSMUST00000170033 Ebf2O08792 575 aa6.58□□□□□ -1.36
Lig4-202ENSMUST00000170033 Slc16a2O70324 545 aa6.58□□□□□ -1.36
Lig4-202ENSMUST00000170033 Snx3O70492 162 aa6.58□□□□□ -1.36
Lig4-202ENSMUST00000170033 Slurp2P0DP59 97 aa6.58□□□□□ -1.36
Lig4-202ENSMUST00000170033 Bmp2P21274 394 aa6.58□□□□□ -1.36
Lig4-202ENSMUST00000170033 AdssP46664 456 aa6.58□□□□□ -1.36
Lig4-202ENSMUST00000170033 Cacnb3P54285 484 aa6.58□□□□□ -1.36
Lig4-202ENSMUST00000170033 Caprin2Q05A80 1031 aaKnown RBP6.58□□□□□ -1.36
Lig4-202ENSMUST00000170033 Slc24a2Q14BI1 711 aa6.58□□□□□ -1.36
Lig4-202ENSMUST00000170033 Tatdn3Q3U1C6 294 aa6.58□□□□□ -1.36
Lig4-202ENSMUST00000170033 Fam193bQ3U2K0 892 aa6.58□□□□□ -1.36
Lig4-202ENSMUST00000170033 Gm5168Q4KL04 211 aa6.58□□□□□ -1.36
Lig4-202ENSMUST00000170033 Miga1Q4QQM5 600 aa6.58□□□□□ -1.36
Lig4-202ENSMUST00000170033 Grik5Q61626 979 aa6.58□□□□□ -1.36
Lig4-202ENSMUST00000170033 Colgalt2Q6NVG7 625 aa6.58□□□□□ -1.36
Lig4-202ENSMUST00000170033 Chmp2bQ8BJF9 213 aa6.58□□□□□ -1.36
Lig4-202ENSMUST00000170033 Tmem11Q8BK08 190 aa6.58□□□□□ -1.36
Lig4-202ENSMUST00000170033 Acot11Q8VHQ9 594 aa6.58□□□□□ -1.36
Lig4-202ENSMUST00000170033 VillQ91YD6 859 aa6.58□□□□□ -1.36
Lig4-202ENSMUST00000170033 Dph5Q9CWQ0 281 aa6.58□□□□□ -1.36
Lig4-202ENSMUST00000170033 Krtap5-3Q9D226 196 aa6.58□□□□□ -1.36
Lig4-202ENSMUST00000170033 Snx5Q9D8U8 404 aa6.58□□□□□ -1.36
Lig4-202ENSMUST00000170033 ParvaQ9EPC1 372 aa6.58□□□□□ -1.36
Lig4-202ENSMUST00000170033 Abcb11Q9QY30 1321 aa6.58□□□□□ -1.36
Lig4-202ENSMUST00000170033 Zfp174B9EJW5 407 aa6.58□□□□□ -1.36
Lig4-202ENSMUST00000170033 Gm38392E9Q2A2 434 aa6.58□□□□□ -1.36
Lig4-202ENSMUST00000170033 Gm21973F6WEZ7 68 aa6.58□□□□□ -1.36
Lig4-202ENSMUST00000170033 Gm7995L7N2E4 160 aa6.58□□□□□ -1.36
Lig4-202ENSMUST00000170033 Guca2bO09051 106 aa6.58□□□□□ -1.36
Lig4-202ENSMUST00000170033 Clcn6O35454 870 aa6.58□□□□□ -1.36
Retrieved 100 of 22,080 RNA–protein pairs in 136.6 ms