Protein–RNA interactions for Protein: E9Q9Q2

R3hdm1, R3H domain-containing 1, mousemouse

Known RBP Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm1E9Q9Q2 Gm25239-201ENSMUST00000174915 86 ntBASIC43.2■■■■■ 4.51
R3hdm1E9Q9Q2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC40.25■■■■■ 4.03
R3hdm1E9Q9Q2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC39.59■■■■□ 3.93
R3hdm1E9Q9Q2 Gm24109-201ENSMUST00000175489 103 ntBASIC37.77■■■■□ 3.64
R3hdm1E9Q9Q2 Gm15042-201ENSMUST00000120212 883 ntBASIC37.16■■■■□ 3.54
R3hdm1E9Q9Q2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC36.51■■■■□ 3.44
R3hdm1E9Q9Q2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC36.49■■■■□ 3.43
R3hdm1E9Q9Q2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC36.31■■■■□ 3.4
R3hdm1E9Q9Q2 Gm15045-201ENSMUST00000117359 883 ntBASIC36.21■■■■□ 3.39
R3hdm1E9Q9Q2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC36.05■■■■□ 3.36
R3hdm1E9Q9Q2 Gm23366-201ENSMUST00000175022 89 ntBASIC35.99■■■■□ 3.35
R3hdm1E9Q9Q2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.82■■■■□ 3.32
R3hdm1E9Q9Q2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC35.44■■■■□ 3.26
R3hdm1E9Q9Q2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC35.12■■■■□ 3.21
R3hdm1E9Q9Q2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
R3hdm1E9Q9Q2 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC35.04■■■■□ 3.2
R3hdm1E9Q9Q2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
R3hdm1E9Q9Q2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
R3hdm1E9Q9Q2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.5■■■■□ 3.11
R3hdm1E9Q9Q2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
R3hdm1E9Q9Q2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
R3hdm1E9Q9Q2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC34.43■■■■□ 3.1
R3hdm1E9Q9Q2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC34.34■■■■□ 3.09
R3hdm1E9Q9Q2 Gm25238-201ENSMUST00000174914 89 ntBASIC34.29■■■■□ 3.08
R3hdm1E9Q9Q2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
R3hdm1E9Q9Q2 Psd-208ENSMUST00000224556 2034 ntBASIC33.62■■■□□ 2.97
R3hdm1E9Q9Q2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC33.56■■■□□ 2.96
R3hdm1E9Q9Q2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33.53■■■□□ 2.96
R3hdm1E9Q9Q2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC33.51■■■□□ 2.95
R3hdm1E9Q9Q2 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.93
R3hdm1E9Q9Q2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC33.3■■■□□ 2.92
R3hdm1E9Q9Q2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
R3hdm1E9Q9Q2 Gm25262-201ENSMUST00000174934 133 ntBASIC33.15■■■□□ 2.9
R3hdm1E9Q9Q2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
R3hdm1E9Q9Q2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC33.07■■■□□ 2.88
R3hdm1E9Q9Q2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC33.03■■■□□ 2.88
R3hdm1E9Q9Q2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.98■■■□□ 2.87
R3hdm1E9Q9Q2 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
R3hdm1E9Q9Q2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.86■■■□□ 2.85
R3hdm1E9Q9Q2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
R3hdm1E9Q9Q2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.75■■■□□ 2.83
R3hdm1E9Q9Q2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
R3hdm1E9Q9Q2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC32.72■■■□□ 2.83
R3hdm1E9Q9Q2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC32.66■■■□□ 2.82
R3hdm1E9Q9Q2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC32.64■■■□□ 2.82
R3hdm1E9Q9Q2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC32.63■■■□□ 2.81
R3hdm1E9Q9Q2 Gm26115-201ENSMUST00000175605 87 ntBASIC32.58■■■□□ 2.81
R3hdm1E9Q9Q2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC32.51■■■□□ 2.79
R3hdm1E9Q9Q2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.5■■■□□ 2.79
R3hdm1E9Q9Q2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
R3hdm1E9Q9Q2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.46■■■□□ 2.79
R3hdm1E9Q9Q2 Gm27325-201ENSMUST00000175467 74 ntBASIC32.44■■■□□ 2.78
R3hdm1E9Q9Q2 Gm8109-201ENSMUST00000194076 746 ntBASIC32.34■■■□□ 2.77
R3hdm1E9Q9Q2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
R3hdm1E9Q9Q2 Rab21-202ENSMUST00000218831 843 ntBASIC32.25■■■□□ 2.75
R3hdm1E9Q9Q2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC32.25■■■□□ 2.75
R3hdm1E9Q9Q2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
R3hdm1E9Q9Q2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
R3hdm1E9Q9Q2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
R3hdm1E9Q9Q2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
R3hdm1E9Q9Q2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
R3hdm1E9Q9Q2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
R3hdm1E9Q9Q2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
R3hdm1E9Q9Q2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
R3hdm1E9Q9Q2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
R3hdm1E9Q9Q2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC31.85■■■□□ 2.69
R3hdm1E9Q9Q2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC31.79■■■□□ 2.68
R3hdm1E9Q9Q2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.72■■■□□ 2.67
R3hdm1E9Q9Q2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC31.7■■■□□ 2.67
R3hdm1E9Q9Q2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.61■■■□□ 2.65
R3hdm1E9Q9Q2 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
R3hdm1E9Q9Q2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
R3hdm1E9Q9Q2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31.58■■■□□ 2.65
R3hdm1E9Q9Q2 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
R3hdm1E9Q9Q2 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC31.56■■■□□ 2.64
R3hdm1E9Q9Q2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
R3hdm1E9Q9Q2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
R3hdm1E9Q9Q2 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
R3hdm1E9Q9Q2 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
R3hdm1E9Q9Q2 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
R3hdm1E9Q9Q2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
R3hdm1E9Q9Q2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31.26■■■□□ 2.59
R3hdm1E9Q9Q2 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC31.25■■■□□ 2.59
R3hdm1E9Q9Q2 Gm17082-201ENSMUST00000166043 1091 ntBASIC31.25■■■□□ 2.59
R3hdm1E9Q9Q2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
R3hdm1E9Q9Q2 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31.2■■■□□ 2.59
R3hdm1E9Q9Q2 Gm24804-201ENSMUST00000174982 85 ntBASIC31.2■■■□□ 2.59
R3hdm1E9Q9Q2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
R3hdm1E9Q9Q2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
R3hdm1E9Q9Q2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31■■■□□ 2.55
R3hdm1E9Q9Q2 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC30.98■■■□□ 2.55
R3hdm1E9Q9Q2 Gm27322-201ENSMUST00000184007 104 ntBASIC30.93■■■□□ 2.54
R3hdm1E9Q9Q2 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
R3hdm1E9Q9Q2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.91■■■□□ 2.54
R3hdm1E9Q9Q2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC30.89■■■□□ 2.54
R3hdm1E9Q9Q2 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
R3hdm1E9Q9Q2 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC30.87■■■□□ 2.53
R3hdm1E9Q9Q2 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
R3hdm1E9Q9Q2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.87■■■□□ 2.53
R3hdm1E9Q9Q2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms