RNA–Protein interactions for RNA: snR50

snR50, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR50, Length 90 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR50snR50 RFC4P40339 323 aaKnown RBP-1.11□□□□□ -2.59
snR50snR50 ERG10P41338 398 aaKnown RBP-1.11□□□□□ -2.59
snR50snR50 YNL190WP53872 204 aa-1.11□□□□□ -2.59
snR50snR50 YMR099CQ03161 297 aaKnown RBP-1.11□□□□□ -2.59
snR50snR50 ATG41Q12048 136 aa-1.11□□□□□ -2.59
snR50snR50 DAS2Q12084 232 aa-1.11□□□□□ -2.59
snR50snR50 DUR1,2P32528 1835 aaKnown RBP-1.12□□□□□ -2.59
snR50snR50 BMH2P34730 273 aaKnown RBP-1.12□□□□□ -2.59
snR50snR50 IPI1P38803 334 aaPredicted RBP-1.12□□□□□ -2.59
snR50snR50 SKI6P46948 246 aaPredicted RBP-1.12□□□□□ -2.59
snR50snR50 HOC1P47124 396 aa-1.12□□□□□ -2.59
snR50snR50 TRM9P49957 279 aa-1.12□□□□□ -2.59
snR50snR50 SGF11Q03067 99 aa-1.12□□□□□ -2.59
snR50snR50 SDO1Q07953 250 aaKnown RBP-1.12□□□□□ -2.59
snR50snR50 POL2P21951 2222 aaKnown RBP-1.13□□□□□ -2.59
snR50snR50 CDC28P00546 298 aaKnown RBP-1.13□□□□□ -2.59
snR50snR50 RPS25BP0C0T4 108 aaKnown RBP-1.13□□□□□ -2.59
snR50snR50 URA6P15700 204 aa-1.13□□□□□ -2.59
snR50snR50 NTG1P31378 399 aa-1.13□□□□□ -2.59
snR50snR50 RME1P32338 300 aaKnown RBP-1.13□□□□□ -2.59
snR50snR50 NTF2P33331 125 aaKnown RBP-1.13□□□□□ -2.59
snR50snR50 YFR035CP43608 114 aa-1.13□□□□□ -2.59
snR50snR50 YLR194CQ05777 254 aa-1.13□□□□□ -2.59
snR50snR50 KAP95Q06142 861 aaKnown RBP-1.13□□□□□ -2.59
snR50snR50 BRX1Q08235 291 aaKnown RBP-1.13□□□□□ -2.59
snR50snR50 RDI1Q12434 202 aa-1.13□□□□□ -2.59
snR50snR50 RPS25AQ3E792 108 aaPredicted RBP-1.13□□□□□ -2.59
snR50snR50 TAF2P23255 1407 aa-1.14□□□□□ -2.59
snR50snR50 HYP2P23301 157 aaKnown RBP-1.14□□□□□ -2.59
snR50snR50 ECM31P38122 312 aa-1.14□□□□□ -2.59
snR50snR50 CUE1P38428 203 aa-1.14□□□□□ -2.59
snR50snR50 AIM2P39721 246 aa-1.14□□□□□ -2.59
snR50snR50 YEA6P39953 335 aa-1.14□□□□□ -2.59
snR50snR50 BRR6P53062 197 aa-1.14□□□□□ -2.59
snR50snR50 EMC4P53073 190 aa-1.14□□□□□ -2.59
snR50snR50 GEP7P53171 287 aa-1.14□□□□□ -2.59
snR50snR50 FYV6P53913 173 aa-1.14□□□□□ -2.59
snR50snR50 FIT3Q08907 204 aa-1.14□□□□□ -2.59
snR50snR50 LAA1P39526 2014 aa-1.15□□□□□ -2.59
snR50snR50 POL30P15873 258 aaKnown RBP-1.15□□□□□ -2.59
snR50snR50 HMF1P40037 129 aaKnown RBP-1.15□□□□□ -2.59
snR50snR50 YGR269WP40326 108 aa-1.15□□□□□ -2.59
snR50snR50 KRE28Q04431 385 aa-1.15□□□□□ -2.59
snR50snR50 YMR315WQ04869 349 aaKnown RBP-1.15□□□□□ -2.59
snR50snR50 COX20Q04935 205 aa-1.15□□□□□ -2.59
snR50snR50 YDL157CQ12082 118 aa-1.15□□□□□ -2.59
snR50snR50 ATP20Q12233 115 aa-1.15□□□□□ -2.59
snR50snR50 YOR381W-AQ3E804 55 aa-1.15□□□□□ -2.59
snR50snR50 RPL33AP05744 107 aaKnown RBP-1.16□□□□□ -2.6
snR50snR50 RPS24AP0CX31 135 aaKnown RBP-1.16□□□□□ -2.6
snR50snR50 RPS24BP0CX32 135 aaKnown RBP-1.16□□□□□ -2.6
snR50snR50 GCY1P14065 312 aaKnown RBP RIP-Chip data-1.16□□□□□ -2.6not detected
snR50snR50 SPT14P32363 452 aa-1.16□□□□□ -2.6
snR50snR50 RRT1P38192 103 aa-1.16□□□□□ -2.6
snR50snR50 RTT105P40063 208 aa-1.16□□□□□ -2.6
snR50snR50 NSA2P40078 261 aaKnown RBP-1.16□□□□□ -2.6
snR50snR50 LIA1P47120 325 aaKnown RBP-1.16□□□□□ -2.6
snR50snR50 PAC10P48363 199 aa-1.16□□□□□ -2.6
snR50snR50 LSM7P53905 115 aaKnown RBP-1.16□□□□□ -2.6
snR50snR50 PGC1Q08959 321 aa-1.16□□□□□ -2.6
snR50snR50 YIL002W-AQ3E7Z5 69 aa-1.16□□□□□ -2.6
snR50snR50 MRPL25P23369 157 aa-1.17□□□□□ -2.6
snR50snR50 CNB1P25296 175 aa-1.17□□□□□ -2.6
snR50snR50 TAF14P35189 244 aa-1.17□□□□□ -2.6
snR50snR50 GAT4P40569 121 aa-1.17□□□□□ -2.6
snR50snR50 TDA4P47153 279 aa-1.17□□□□□ -2.6
snR50snR50 YJR128WP47162 119 aa-1.17□□□□□ -2.6
snR50snR50 DIE2P50076 525 aa-1.17□□□□□ -2.6
snR50snR50 ARL3Q02804 198 aa-1.17□□□□□ -2.6
snR50snR50 YML079WQ03629 201 aa-1.17□□□□□ -2.6
snR50snR50 RIM9Q04734 239 aa-1.17□□□□□ -2.6
snR50snR50 GAL83Q04739 417 aa-1.17□□□□□ -2.6
snR50snR50 RUD3Q12234 484 aaKnown RBP-1.17□□□□□ -2.6
snR50snR50 GIS3Q12418 502 aa-1.17□□□□□ -2.6
snR50snR50 KTI11Q3E840 82 aa-1.17□□□□□ -2.6
snR50snR50 YHR214C-EQ8TGK0 99 aa-1.17□□□□□ -2.6
snR50snR50 RPO26P20435 155 aa-1.18□□□□□ -2.6
snR50snR50 VPS55P47111 140 aa-1.18□□□□□ -2.6
snR50snR50 NRK1P53915 240 aa-1.18□□□□□ -2.6
snR50snR50 EGD1Q02642 157 aaKnown RBP-1.18□□□□□ -2.6
snR50snR50 FUS2Q05670 677 aa-1.18□□□□□ -2.6
snR50snR50 YLR036CQ07986 203 aa-1.18□□□□□ -2.6
snR50snR50 YOL014WQ08110 124 aa-1.18□□□□□ -2.6
snR50snR50 REX3Q12090 404 aa-1.18□□□□□ -2.6
snR50snR50 SPS2P08459 502 aa-1.19□□□□□ -2.6
snR50snR50 GCN3P14741 305 aa-1.19□□□□□ -2.6
snR50snR50 RPA12P32529 125 aaKnown RBP-1.19□□□□□ -2.6
snR50snR50 SSO1P32867 290 aa-1.19□□□□□ -2.6
snR50snR50 YBR013CP38215 129 aa-1.19□□□□□ -2.6
snR50snR50 MIC12P38341 106 aa-1.19□□□□□ -2.6
snR50snR50 YEL014CP39999 101 aa-1.19□□□□□ -2.6
snR50snR50 YFL019CP43576 117 aa-1.19□□□□□ -2.6
snR50snR50 MIC26P50087 233 aa-1.19□□□□□ -2.6
snR50snR50 YPR127WQ06494 345 aa-1.19□□□□□ -2.6
snR50snR50 CMC4Q3E7A9 73 aa-1.19□□□□□ -2.6
snR50snR50 YML100W-AQ8TGT0 57 aa-1.19□□□□□ -2.6
snR50snR50 HSL1P34244 1518 aa-1.2□□□□□ -2.6
snR50snR50 YCR016WP25617 290 aaKnown RBP-1.2□□□□□ -2.6
snR50snR50 YCR087C-AP37263 153 aa-1.2□□□□□ -2.6
snR50snR50 MIC27P50945 234 aa-1.2□□□□□ -2.6
Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms