RNA–Protein interactions for RNA: YPL211W

NIP7, Transcript of Nucleolar protein required for 60S ribosome subunit biogenesis, yeast

Gene NIP7, Length 546 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NIP7	YPL211W	PCL7	P40186	285 aa		2.66	□□□□□ -1.98
NIP7	YPL211W	NIF3	P53081	288 aa		2.66	□□□□□ -1.98
NIP7	YPL211W	YGL114W	P53134	725 aa		2.66	□□□□□ -1.98
NIP7	YPL211W	MEH1	Q02205	184 aa		2.66	□□□□□ -1.98
NIP7	YPL211W	YMR181C	Q03231	154 aa		2.66	□□□□□ -1.98
NIP7	YPL211W	THI74	Q04083	370 aa		2.66	□□□□□ -1.98
NIP7	YPL211W	ARR2	Q06597	130 aa		2.66	□□□□□ -1.98
NIP7	YPL211W	PRP11	Q07350	266 aa	Predicted RBP	2.66	□□□□□ -1.98
NIP7	YPL211W	PRM4	Q12498	284 aa		2.66	□□□□□ -1.98
NIP7	YPL211W	HUG1	Q6Q5K6	68 aa		2.66	□□□□□ -1.98
NIP7	YPL211W	TPI1	P00942	248 aa	Known RBP	2.65	□□□□□ -1.99
NIP7	YPL211W	ARG80	P07249	177 aa		2.65	□□□□□ -1.99
NIP7	YPL211W	QCR2	P07257	368 aa		2.65	□□□□□ -1.99
NIP7	YPL211W	PUT1	P09368	476 aa		2.65	□□□□□ -1.99
NIP7	YPL211W	GCN3	P14741	305 aa		2.65	□□□□□ -1.99
NIP7	YPL211W	GRX2	P17695	143 aa	Known RBP	2.65	□□□□□ -1.99
NIP7	YPL211W	SAR1	P20606	190 aa	Known RBP	2.65	□□□□□ -1.99
NIP7	YPL211W	LSB5	P25369	354 aa		2.65	□□□□□ -1.99
NIP7	YPL211W	RPB9	P27999	122 aa		2.65	□□□□□ -1.99
NIP7	YPL211W	UTP30	P36144	274 aa	Known RBP	2.65	□□□□□ -1.99
NIP7	YPL211W	ADH5	P38113	351 aa	Known RBP	2.65	□□□□□ -1.99
NIP7	YPL211W	CUE1	P38428	203 aa		2.65	□□□□□ -1.99
NIP7	YPL211W	IKI1	P38874	309 aa		2.65	□□□□□ -1.99
NIP7	YPL211W	YJL118W	P47022	219 aa		2.65	□□□□□ -1.99
NIP7	YPL211W	APJ1	P53940	528 aa		2.65	□□□□□ -1.99
NIP7	YPL211W	HAL1	Q01766	294 aa		2.65	□□□□□ -1.99
NIP7	YPL211W	LPP1	Q04396	274 aa		2.65	□□□□□ -1.99
NIP7	YPL211W	ADH6	Q04894	360 aa	Known RBP	2.65	□□□□□ -1.99
NIP7	YPL211W	YFH1	Q07540	174 aa		2.65	□□□□□ -1.99
NIP7	YPL211W	YPD1	Q07688	167 aa		2.65	□□□□□ -1.99
NIP7	YPL211W	YOL029C	Q08187	201 aa		2.65	□□□□□ -1.99
NIP7	YPL211W	FEX2	Q08991	375 aa		2.65	□□□□□ -1.99
NIP7	YPL211W	TFB5	Q3E7C1	72 aa	Predicted RBP	2.65	□□□□□ -1.99
NIP7	YPL211W	RPL9A	P05738	191 aa	Known RBP	2.64	□□□□□ -1.99
NIP7	YPL211W	ILV5	P06168	395 aa	Known RBP	2.64	□□□□□ -1.99
NIP7	YPL211W	ROX3	P25046	220 aa		2.64	□□□□□ -1.99
NIP7	YPL211W	ERG2	P32352	222 aa		2.64	□□□□□ -1.99
NIP7	YPL211W	SPS18	P32572	300 aa		2.64	□□□□□ -1.99
NIP7	YPL211W	CBT1	P36038	271 aa	Predicted RBP	2.64	□□□□□ -1.99
NIP7	YPL211W	YPC1	P38298	316 aa		2.64	□□□□□ -1.99
NIP7	YPL211W	RRF1	P38771	230 aa		2.64	□□□□□ -1.99
NIP7	YPL211W	YHR138C	P38841	114 aa	Predicted RBP	2.64	□□□□□ -1.99
NIP7	YPL211W	YER188W	P40103	239 aa		2.64	□□□□□ -1.99
NIP7	YPL211W	YJR056C	P47115	236 aa		2.64	□□□□□ -1.99
NIP7	YPL211W	BET5	Q03630	159 aa		2.64	□□□□□ -1.99
NIP7	YPL211W	MIX17	Q03667	156 aa		2.64	□□□□□ -1.99
NIP7	YPL211W	HRD1	Q08109	551 aa		2.64	□□□□□ -1.99
NIP7	YPL211W	FEX1	Q08913	375 aa		2.64	□□□□□ -1.99
NIP7	YPL211W	YCT1	Q12235	531 aa		2.64	□□□□□ -1.99
NIP7	YPL211W	BOL1	Q3E793	110 aa		2.64	□□□□□ -1.99
NIP7	YPL211W	YOS1	Q3E834	85 aa		2.64	□□□□□ -1.99
NIP7	YPL211W	URA2	P07259	2214 aa	Known RBP	2.63	□□□□□ -1.99
NIP7	YPL211W	CCW14	O13547	238 aa		2.63	□□□□□ -1.99
NIP7	YPL211W	BGL2	P15703	313 aa	Known RBP	2.63	□□□□□ -1.99
NIP7	YPL211W	YMR31	P19955	123 aa		2.63	□□□□□ -1.99
NIP7	YPL211W	CKS1	P20486	150 aa	Known RBP	2.63	□□□□□ -1.99
NIP7	YPL211W	ACB1	P31787	87 aa		2.63	□□□□□ -1.99
NIP7	YPL211W	ERV15	P38312	142 aa		2.63	□□□□□ -1.99
NIP7	YPL211W	LSM12	P38828	187 aa	Known RBP	2.63	□□□□□ -1.99
NIP7	YPL211W	YIR035C	P40579	254 aa		2.63	□□□□□ -1.99
NIP7	YPL211W	YJR012C	P47087	207 aa		2.63	□□□□□ -1.99
NIP7	YPL211W	RPL9B	P51401	191 aa	Known RBP	2.63	□□□□□ -1.99
NIP7	YPL211W	VPS28	Q02767	242 aa		2.63	□□□□□ -1.99
NIP7	YPL211W	STD1	Q02794	444 aa		2.63	□□□□□ -1.99
NIP7	YPL211W	PAM18	Q07914	168 aa		2.63	□□□□□ -1.99
NIP7	YPL211W	ATO3	Q12359	275 aa		2.63	□□□□□ -1.99
NIP7	YPL211W	VPS63	O13549	108 aa		2.62	□□□□□ -1.99
NIP7	YPL211W	PHO85	P17157	305 aa		2.62	□□□□□ -1.99
NIP7	YPL211W	POP5	P28005	173 aa		2.62	□□□□□ -1.99
NIP7	YPL211W	SUA7	P29055	345 aa	Predicted RBP	2.62	□□□□□ -1.99
NIP7	YPL211W	SRY1	P36007	326 aa		2.62	□□□□□ -1.99
NIP7	YPL211W	ECM31	P38122	312 aa		2.62	□□□□□ -1.99
NIP7	YPL211W	YER137C	P40083	148 aa	Known RBP	2.62	□□□□□ -1.99
NIP7	YPL211W	RPL13B	P40212	199 aa	Known RBP	2.62	□□□□□ -1.99
NIP7	YPL211W	ACT1	P60010	375 aa	Known RBP	2.62	□□□□□ -1.99
NIP7	YPL211W	YMR166C	Q03829	368 aa		2.62	□□□□□ -1.99
NIP7	YPL211W	FSH2	Q05015	223 aa		2.62	□□□□□ -1.99
NIP7	YPL211W	RRT7	Q07829	113 aa		2.62	□□□□□ -1.99
NIP7	YPL211W	FCY1	Q12178	158 aa		2.62	□□□□□ -1.99
NIP7	YPL211W	ATG5	Q12380	294 aa		2.62	□□□□□ -1.99
NIP7	YPL211W	RPL13A	Q12690	199 aa	Predicted RBP	2.62	□□□□□ -1.99
NIP7	YPL211W	HTB1	P02293	131 aa	Known RBP	2.61	□□□□□ -1.99
NIP7	YPL211W	SEC22	P22214	214 aa		2.61	□□□□□ -1.99
NIP7	YPL211W	MRS4	P23500	304 aa		2.61	□□□□□ -1.99
NIP7	YPL211W	ERV1	P27882	189 aa		2.61	□□□□□ -1.99
NIP7	YPL211W	RAD23	P32628	398 aa	Known RBP	2.61	□□□□□ -1.99
NIP7	YPL211W	PDC2	P32896	925 aa		2.61	□□□□□ -1.99
NIP7	YPL211W	SRL3	P36167	246 aa		2.61	□□□□□ -1.99
NIP7	YPL211W	ATP3	P38077	311 aa	Known RBP	2.61	□□□□□ -1.99
NIP7	YPL211W	SWM2	P40342	146 aa		2.61	□□□□□ -1.99
NIP7	YPL211W	ARP3	P47117	449 aa	Known RBP	2.61	□□□□□ -1.99
NIP7	YPL211W	PNC1	P53184	216 aa	Known RBP	2.61	□□□□□ -1.99
NIP7	YPL211W	YGR050C	P53231	118 aa		2.61	□□□□□ -1.99
NIP7	YPL211W	MRPL50	P53724	139 aa		2.61	□□□□□ -1.99
NIP7	YPL211W	GPI15	P53961	229 aa		2.61	□□□□□ -1.99
NIP7	YPL211W	YNG1	Q08465	219 aa		2.61	□□□□□ -1.99
NIP7	YPL211W	JID1	Q12350	301 aa		2.61	□□□□□ -1.99
NIP7	YPL211W	RAX2	Q12465	1220 aa		2.61	□□□□□ -1.99
NIP7	YPL211W	AIM45	Q12480	344 aa	Known RBP	2.61	□□□□□ -1.99
NIP7	YPL211W	YLR146W-A	Q2V2P1	62 aa		2.61	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 90 ms