RNA–Protein interactions for RNA: YPL163C

SVS1, Transcript of Cell wall and vacuolar protein, yeast

Gene SVS1, Length 783 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SVS1	YPL163C	RAD28	Q12021	506 aa		0.72	□□□□□ -2.29
SVS1	YPL163C	YHR212W-A	P0CX91	67 aa		0.71	□□□□□ -2.3
SVS1	YPL163C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	0.71	□□□□□ -2.3	not detected
SVS1	YPL163C	UBC6	P33296	250 aa	Predicted RBP	0.71	□□□□□ -2.3
SVS1	YPL163C	COX15	P40086	486 aa		0.71	□□□□□ -2.3
SVS1	YPL163C	YFL065C	P43539	102 aa		0.71	□□□□□ -2.3
SVS1	YPL163C	ARO8	P53090	500 aa	Known RBP	0.71	□□□□□ -2.3
SVS1	YPL163C	YDR274C	P87283	123 aa		0.71	□□□□□ -2.3
SVS1	YPL163C	CUE4	Q04201	117 aa	Predicted RBP	0.71	□□□□□ -2.3
SVS1	YPL163C	YMR321C	Q04898	105 aa		0.71	□□□□□ -2.3
SVS1	YPL163C	RHO1	P06780	209 aa	Known RBP	0.7	□□□□□ -2.3
SVS1	YPL163C	SSO1	P32867	290 aa		0.7	□□□□□ -2.3
SVS1	YPL163C	YNL247W	P53852	767 aa	Known RBP	0.7	□□□□□ -2.3
SVS1	YPL163C	RRN5	Q02983	363 aa		0.7	□□□□□ -2.3
SVS1	YPL163C	RCE1	Q03530	315 aa		0.7	□□□□□ -2.3
SVS1	YPL163C	YDR249C	Q03787	373 aa		0.7	□□□□□ -2.3
SVS1	YPL163C	URA5	P13298	226 aa	Known RBP	0.69	□□□□□ -2.3
SVS1	YPL163C	KSS1	P14681	368 aa		0.69	□□□□□ -2.3
SVS1	YPL163C	BET1	P22804	142 aa		0.69	□□□□□ -2.3
SVS1	YPL163C	MIC12	P38341	106 aa		0.69	□□□□□ -2.3
SVS1	YPL163C	EDC3	P39998	551 aa	Known RBP	0.69	□□□□□ -2.3
SVS1	YPL163C	YGR050C	P53231	118 aa		0.69	□□□□□ -2.3
SVS1	YPL163C	YOL160W	Q08321	113 aa		0.69	□□□□□ -2.3
SVS1	YPL163C	YFR032C-B	Q8TGU2	87 aa		0.69	□□□□□ -2.3
SVS1	YPL163C	SEC4	P07560	215 aa	Known RBP	0.68	□□□□□ -2.3
SVS1	YPL163C	RPL27A	P0C2H6	136 aa	Known RBP	0.68	□□□□□ -2.3
SVS1	YPL163C	YMR31	P19955	123 aa		0.68	□□□□□ -2.3
SVS1	YPL163C	ATP15	P21306	62 aa		0.68	□□□□□ -2.3
SVS1	YPL163C	YHL042W	P38729	150 aa		0.68	□□□□□ -2.3
SVS1	YPL163C	RMD6	P39975	231 aa		0.68	□□□□□ -2.3
SVS1	YPL163C	PHB1	P40961	287 aa		0.68	□□□□□ -2.3
SVS1	YPL163C	CWC27	Q02770	301 aa		0.68	□□□□□ -2.3
SVS1	YPL163C	AIM36	Q03798	255 aa		0.68	□□□□□ -2.3
SVS1	YPL163C	YHR007C-A	Q07074	71 aa		0.68	□□□□□ -2.3
SVS1	YPL163C	YHR214C-E	Q8TGK0	99 aa		0.68	□□□□□ -2.3
SVS1	YPL163C	IKI3	Q06706	1349 aa	Known RBP	0.67	□□□□□ -2.3
SVS1	YPL163C	THP2	O13539	261 aa	Known RBP	0.67	□□□□□ -2.3
SVS1	YPL163C	VMA6	P32366	345 aa	Known RBP	0.67	□□□□□ -2.3
SVS1	YPL163C	MGM101	P32787	269 aa	Known RBP	0.67	□□□□□ -2.3
SVS1	YPL163C	AST2	P39945	430 aa	Known RBP	0.67	□□□□□ -2.3
SVS1	YPL163C	YER034W	P40022	185 aa	Known RBP	0.67	□□□□□ -2.3
SVS1	YPL163C	Q0297	Q9ZZV8	51 aa		0.67	□□□□□ -2.3
SVS1	YPL163C	RPL28	P02406	149 aa	Known RBP	0.66	□□□□□ -2.3
SVS1	YPL163C	RPB3	P16370	318 aa	Known RBP	0.66	□□□□□ -2.3
SVS1	YPL163C	PTM1	P32857	523 aa		0.66	□□□□□ -2.3
SVS1	YPL163C	RTC3	P38804	111 aa	Predicted RBP	0.66	□□□□□ -2.3
SVS1	YPL163C	YER085C	P40058	173 aa		0.66	□□□□□ -2.3
SVS1	YPL163C	HYR1	P40581	163 aa	Known RBP	0.66	□□□□□ -2.3
SVS1	YPL163C	PET191	Q02772	108 aa		0.66	□□□□□ -2.3
SVS1	YPL163C	SLH1	P53327	1967 aa	Known RBP	0.66	□□□□□ -2.3
SVS1	YPL163C	MDM35	O60200	86 aa		0.65	□□□□□ -2.31
SVS1	YPL163C	YPL073C	P40323	161 aa		0.65	□□□□□ -2.31
SVS1	YPL163C	MPC3	P53311	146 aa		0.65	□□□□□ -2.31
SVS1	YPL163C	SPO13	P23624	291 aa		0.64	□□□□□ -2.31
SVS1	YPL163C	RPL24B	P24000	155 aa	Known RBP	0.64	□□□□□ -2.31
SVS1	YPL163C	PRX1	P34227	261 aa	Known RBP	0.64	□□□□□ -2.31
SVS1	YPL163C	YMR252C	Q04814	134 aa		0.64	□□□□□ -2.31
SVS1	YPL163C	YNG1	Q08465	219 aa		0.64	□□□□□ -2.31
SVS1	YPL163C	YKL183C-A	Q3E765	70 aa		0.64	□□□□□ -2.31
SVS1	YPL163C	SEY1	Q99287	776 aa		0.64	□□□□□ -2.31
SVS1	YPL163C	GCN3	P14741	305 aa		0.63	□□□□□ -2.31
SVS1	YPL163C	YFH7	P43591	353 aa		0.63	□□□□□ -2.31
SVS1	YPL163C	ADO1	P47143	340 aa	Known RBP	0.63	□□□□□ -2.31
SVS1	YPL163C	MGA1	P53050	456 aa		0.63	□□□□□ -2.31
SVS1	YPL163C	YPR174C	Q06616	221 aa	Predicted RBP	0.63	□□□□□ -2.31
SVS1	YPL163C	YOR342C	Q12182	319 aa		0.63	□□□□□ -2.31
SVS1	YPL163C	PPA2	P28239	310 aa		0.62	□□□□□ -2.31
SVS1	YPL163C	PDR17	P53844	350 aa		0.62	□□□□□ -2.31
SVS1	YPL163C	COG5	P53951	403 aa		0.62	□□□□□ -2.31
SVS1	YPL163C	JLP1	Q12358	412 aa		0.62	□□□□□ -2.31
SVS1	YPL163C	YBR121C-A	P0C5L4	52 aa		0.61	□□□□□ -2.31
SVS1	YPL163C	MAG1	P22134	296 aa	Known RBP	0.61	□□□□□ -2.31
SVS1	YPL163C	TRS20	P38334	175 aa		0.61	□□□□□ -2.31
SVS1	YPL163C	YEL008W	P40001	126 aa		0.61	□□□□□ -2.31
SVS1	YPL163C	ERG28	P40030	148 aa		0.61	□□□□□ -2.31
SVS1	YPL163C	LSM7	P53905	115 aa	Known RBP	0.61	□□□□□ -2.31
SVS1	YPL163C	VPS71	Q03433	280 aa		0.61	□□□□□ -2.31
SVS1	YPL163C	DGA1	Q08650	418 aa		0.61	□□□□□ -2.31
SVS1	YPL163C	SAC3	P46674	1301 aa		0.61	□□□□□ -2.31
SVS1	YPL163C	POR1	P04840	283 aa	Known RBP	0.6	□□□□□ -2.31
SVS1	YPL163C	CKS1	P20486	150 aa	Known RBP	0.6	□□□□□ -2.31
SVS1	YPL163C	TAF14	P35189	244 aa		0.6	□□□□□ -2.31
SVS1	YPL163C	ODC2	Q99297	307 aa		0.6	□□□□□ -2.31
SVS1	YPL163C	RPL25	P04456	142 aa	Known RBP	0.59	□□□□□ -2.31
SVS1	YPL163C	YHL018W	P38744	120 aa	Predicted RBP	0.59	□□□□□ -2.31
SVS1	YPL163C	YNL194C	P40169	301 aa		0.59	□□□□□ -2.31
SVS1	YPL163C	IRC18	P47056	224 aa		0.59	□□□□□ -2.31
SVS1	YPL163C	HNT1	Q04344	158 aa	Known RBP	0.59	□□□□□ -2.31
SVS1	YPL163C	LCL2	Q08045	131 aa		0.59	□□□□□ -2.31
SVS1	YPL163C	YDR157W	A0A023PZE8	133 aa		0.58	□□□□□ -2.32
SVS1	YPL163C	MER1	P16523	270 aa		0.58	□□□□□ -2.32
SVS1	YPL163C	OCH1	P31755	480 aa		0.58	□□□□□ -2.32
SVS1	YPL163C	CBT1	P36038	271 aa	Predicted RBP	0.58	□□□□□ -2.32
SVS1	YPL163C	HPA3	P39979	161 aa		0.58	□□□□□ -2.32
SVS1	YPL163C	GAT4	P40569	121 aa		0.58	□□□□□ -2.32
SVS1	YPL163C	ERG10	P41338	398 aa	Known RBP	0.58	□□□□□ -2.32
SVS1	YPL163C	YRB1	P41920	201 aa	Known RBP	0.58	□□□□□ -2.32
SVS1	YPL163C	GRX8	Q05926	109 aa		0.58	□□□□□ -2.32
SVS1	YPL163C	SPS18	P32572	300 aa		0.57	□□□□□ -2.32
SVS1	YPL163C	BMH2	P34730	273 aa	Known RBP	0.57	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 72.4 ms