RNA–Protein interactions for RNA: YPL002C

SNF8, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene SNF8, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF8YPL002C PRE1P22141 198 aaKnown RBP3.27□□□□□ -1.89
SNF8YPL002C OCH1P31755 480 aa3.27□□□□□ -1.89
SNF8YPL002C MRP49P32388 137 aa3.27□□□□□ -1.89
SNF8YPL002C SOR1P35497 357 aaKnown RBP3.27□□□□□ -1.89
SNF8YPL002C YKL162CP36052 402 aa3.27□□□□□ -1.89
SNF8YPL002C CHL4P38907 458 aa3.27□□□□□ -1.89
SNF8YPL002C TIR3P40552 269 aa3.27□□□□□ -1.89
SNF8YPL002C XPT1P47165 209 aa3.27□□□□□ -1.89
SNF8YPL002C AVT4P50944 713 aa3.27□□□□□ -1.89
SNF8YPL002C MMS2P53152 137 aa3.27□□□□□ -1.89
SNF8YPL002C MAK3Q03503 176 aa3.27□□□□□ -1.89
SNF8YPL002C SMP3Q04174 516 aa3.27□□□□□ -1.89
SNF8YPL002C GPI11Q06636 219 aa3.27□□□□□ -1.89
SNF8YPL002C SOR2Q07786 357 aa3.27□□□□□ -1.89
SNF8YPL002C LDS2Q08218 356 aa3.27□□□□□ -1.89
SNF8YPL002C TPI1P00942 248 aaKnown RBP3.26□□□□□ -1.89
SNF8YPL002C RPL31BP0C2H9 113 aaKnown RBP3.26□□□□□ -1.89
SNF8YPL002C GRX2P17695 143 aaKnown RBP3.26□□□□□ -1.89
SNF8YPL002C SEC59P20048 519 aa3.26□□□□□ -1.89
SNF8YPL002C TOM40P23644 387 aaKnown RBP3.26□□□□□ -1.89
SNF8YPL002C YCR023CP25351 611 aa3.26□□□□□ -1.89
SNF8YPL002C TIR2P33890 251 aa3.26□□□□□ -1.89
SNF8YPL002C PHD1P36093 366 aa3.26□□□□□ -1.89
SNF8YPL002C FRM2P37261 193 aa3.26□□□□□ -1.89
SNF8YPL002C NAT2P37293 288 aa3.26□□□□□ -1.89
SNF8YPL002C ECM31P38122 312 aa3.26□□□□□ -1.89
SNF8YPL002C GLC8P41818 229 aa3.26□□□□□ -1.89
SNF8YPL002C GON7P46984 123 aa3.26□□□□□ -1.89
SNF8YPL002C TPN1P53099 579 aa3.26□□□□□ -1.89
SNF8YPL002C USE1P53146 245 aa3.26□□□□□ -1.89
SNF8YPL002C MRH4P53166 561 aa3.26□□□□□ -1.89
SNF8YPL002C HCH1P53834 153 aa3.26□□□□□ -1.89
SNF8YPL002C SPG4Q04438 115 aa3.26□□□□□ -1.89
SNF8YPL002C YDR114CQ04597 100 aa3.26□□□□□ -1.89
SNF8YPL002C LIP2Q06005 328 aa3.26□□□□□ -1.89
SNF8YPL002C ATG39Q06159 398 aa3.26□□□□□ -1.89
SNF8YPL002C AIM45Q12480 344 aaKnown RBP3.26□□□□□ -1.89
SNF8YPL002C RIB3Q99258 208 aa3.26□□□□□ -1.89
SNF8YPL002C SAL1D6W196 494 aa3.25□□□□□ -1.89
SNF8YPL002C CYC3P06182 269 aa3.25□□□□□ -1.89
SNF8YPL002C MIR1P23641 311 aaKnown RBP3.25□□□□□ -1.89
SNF8YPL002C MSK1P32048 576 aa3.25□□□□□ -1.89
SNF8YPL002C AGA1P32323 725 aa3.25□□□□□ -1.89
SNF8YPL002C YBR144CP34215 104 aa3.25□□□□□ -1.89
SNF8YPL002C SKG1P36169 355 aa3.25□□□□□ -1.89
SNF8YPL002C CUE1P38428 203 aa3.25□□□□□ -1.89
SNF8YPL002C RPF1P38805 295 aaKnown RBP3.25□□□□□ -1.89
SNF8YPL002C GTT1P40582 234 aa3.25□□□□□ -1.89
SNF8YPL002C ERJ5P43613 295 aaPredicted RBP3.25□□□□□ -1.89
SNF8YPL002C RPA43P46669 326 aa3.25□□□□□ -1.89
SNF8YPL002C PIR5P46999 287 aa3.25□□□□□ -1.89
SNF8YPL002C IRC18P47056 224 aa3.25□□□□□ -1.89
SNF8YPL002C POP6P53218 158 aa3.25□□□□□ -1.89
SNF8YPL002C ACT1P60010 375 aaKnown RBP3.25□□□□□ -1.89
SNF8YPL002C RAV2Q03956 351 aa3.25□□□□□ -1.89
SNF8YPL002C MRX8Q05473 314 aa3.25□□□□□ -1.89
SNF8YPL002C CNL1Q06333 122 aa3.25□□□□□ -1.89
SNF8YPL002C FSF1Q12029 327 aaKnown RBP3.25□□□□□ -1.89
SNF8YPL002C YOR283WQ12040 230 aaKnown RBP3.25□□□□□ -1.89
SNF8YPL002C YCT1Q12235 531 aa3.25□□□□□ -1.89
SNF8YPL002C RPL28P02406 149 aaKnown RBP3.24□□□□□ -1.89
SNF8YPL002C TPK3P05986 398 aa3.24□□□□□ -1.89
SNF8YPL002C FCY2P17064 533 aa3.24□□□□□ -1.89
SNF8YPL002C AHC2P25649 128 aa3.24□□□□□ -1.89
SNF8YPL002C QDR3P38227 689 aa3.24□□□□□ -1.89
SNF8YPL002C SPO73P40031 143 aa3.24□□□□□ -1.89
SNF8YPL002C YER079WP40052 210 aaKnown RBP3.24□□□□□ -1.89
SNF8YPL002C MRPL49P40858 161 aaPredicted RBP3.24□□□□□ -1.89
SNF8YPL002C YCH1P42937 148 aa3.24□□□□□ -1.89
SNF8YPL002C MSO1P53604 210 aaKnown RBP3.24□□□□□ -1.89
SNF8YPL002C YNL095CP53932 642 aa3.24□□□□□ -1.89
SNF8YPL002C HHT1P61830 136 aa3.24□□□□□ -1.89
SNF8YPL002C ADD37Q03233 198 aa3.24□□□□□ -1.89
SNF8YPL002C HNT1Q04344 158 aaKnown RBP3.24□□□□□ -1.89
SNF8YPL002C YLR179CQ06252 201 aaKnown RBP3.24□□□□□ -1.89
SNF8YPL002C TRM10Q12400 293 aa3.24□□□□□ -1.89
SNF8YPL002C SIR2P06700 562 aa3.23□□□□□ -1.89
SNF8YPL002C YHR212W-AP0CX91 67 aa3.23□□□□□ -1.89
SNF8YPL002C BGL2P15703 313 aaKnown RBP3.23□□□□□ -1.89
SNF8YPL002C PHO80P20052 293 aa3.23□□□□□ -1.89
SNF8YPL002C INO2P26798 304 aa3.23□□□□□ -1.89
SNF8YPL002C POP5P28005 173 aa3.23□□□□□ -1.89
SNF8YPL002C VMA5P31412 392 aaKnown RBP3.23□□□□□ -1.89
SNF8YPL002C ARO7P32178 256 aa3.23□□□□□ -1.89
SNF8YPL002C PAN3P36102 679 aaPredicted RBP3.23□□□□□ -1.89
SNF8YPL002C YKR041WP36134 250 aa3.23□□□□□ -1.89
SNF8YPL002C YBR137WP38276 179 aa3.23□□□□□ -1.89
SNF8YPL002C YBR285WP38354 144 aa3.23□□□□□ -1.89
SNF8YPL002C YER076CP40049 302 aa3.23□□□□□ -1.89
SNF8YPL002C FIP1P45976 327 aa3.23□□□□□ -1.89
SNF8YPL002C TAD2P47058 250 aa3.23□□□□□ -1.89
SNF8YPL002C HMS2P47175 358 aa3.23□□□□□ -1.89
SNF8YPL002C PMT5P52867 743 aa3.23□□□□□ -1.89
SNF8YPL002C ARO8P53090 500 aaKnown RBP3.23□□□□□ -1.89
SNF8YPL002C TMA23Q03525 211 aa3.23□□□□□ -1.89
SNF8YPL002C YMR087WQ04299 284 aa3.23□□□□□ -1.89
SNF8YPL002C SPS2P08459 502 aa3.22□□□□□ -1.89
SNF8YPL002C SNF4P12904 322 aa3.22□□□□□ -1.89
SNF8YPL002C ACB1P31787 87 aa3.22□□□□□ -1.89
SNF8YPL002C SPT14P32363 452 aa3.22□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms