RNA–Protein interactions for RNA: YOR132W

VPS17, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS17, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS17YOR132W UBC12P52491 188 aa2.76□□□□□ -1.97
VPS17YOR132W YNR062CP53748 327 aa2.76□□□□□ -1.97
VPS17YOR132W BUD25P85052 153 aa2.76□□□□□ -1.97
VPS17YOR132W ABF2Q02486 183 aa2.76□□□□□ -1.97
VPS17YOR132W YDR249CQ03787 373 aa2.76□□□□□ -1.97
VPS17YOR132W YOR292CQ08743 309 aa2.76□□□□□ -1.97
VPS17YOR132W RDI1Q12434 202 aa2.76□□□□□ -1.97
VPS17YOR132W CCH1P50077 2039 aa2.75□□□□□ -1.97
VPS17YOR132W RPS28BP0C0X0 67 aaKnown RBP2.75□□□□□ -1.97
VPS17YOR132W CNB1P25296 175 aa2.75□□□□□ -1.97
VPS17YOR132W TIM12P32830 109 aa2.75□□□□□ -1.97
VPS17YOR132W SFK1P35735 353 aa2.75□□□□□ -1.97
VPS17YOR132W YOR062CP36025 268 aa2.75□□□□□ -1.97
VPS17YOR132W YNL208WP40159 199 aaKnown RBP2.75□□□□□ -1.97
VPS17YOR132W YMR144WP40214 342 aaKnown RBP2.75□□□□□ -1.97
VPS17YOR132W HAC1P41546 238 aa2.75□□□□□ -1.97
VPS17YOR132W YJR085CP47131 105 aaKnown RBP2.75□□□□□ -1.97
VPS17YOR132W YGR042WP53227 271 aa2.75□□□□□ -1.97
VPS17YOR132W YPL113CQ02961 396 aa2.75□□□□□ -1.97
VPS17YOR132W FSH2Q05015 223 aa2.75□□□□□ -1.97
VPS17YOR132W HRT1Q08273 121 aa2.75□□□□□ -1.97
VPS17YOR132W FEX1Q08913 375 aa2.75□□□□□ -1.97
VPS17YOR132W FEX2Q08991 375 aa2.75□□□□□ -1.97
VPS17YOR132W RPS28AQ3E7X9 67 aaPredicted RBP2.75□□□□□ -1.97
VPS17YOR132W YHR213W-AQ8TGT4 77 aa2.75□□□□□ -1.97
VPS17YOR132W TAO3P40468 2376 aa2.75□□□□□ -1.97
VPS17YOR132W YMR316C-AI2HB70 103 aa2.74□□□□□ -1.97
VPS17YOR132W MDM35O60200 86 aa2.74□□□□□ -1.97
VPS17YOR132W MRS1P07266 363 aa2.74□□□□□ -1.97
VPS17YOR132W SEC22P22214 214 aa2.74□□□□□ -1.97
VPS17YOR132W MDH3P32419 343 aaKnown RBP RIP-Chip data2.74□□□□□ -1.97not detected
VPS17YOR132W EMP24P32803 203 aaKnown RBP2.74□□□□□ -1.97
VPS17YOR132W ECM31P38122 312 aa2.74□□□□□ -1.97
VPS17YOR132W TRR2P38816 342 aa2.74□□□□□ -1.97
VPS17YOR132W FMP41P53889 259 aaKnown RBP2.74□□□□□ -1.97
VPS17YOR132W PET191Q02772 108 aa2.74□□□□□ -1.97
VPS17YOR132W YPR127WQ06494 345 aa2.74□□□□□ -1.97
VPS17YOR132W MSI1P13712 422 aa2.73□□□□□ -1.97
VPS17YOR132W MAG1P22134 296 aaKnown RBP2.73□□□□□ -1.97
VPS17YOR132W MRP17P28778 131 aa2.73□□□□□ -1.97
VPS17YOR132W MRPL39P36533 70 aa2.73□□□□□ -1.97
VPS17YOR132W FRM2P37261 193 aa2.73□□□□□ -1.97
VPS17YOR132W SEN34P39707 275 aa2.73□□□□□ -1.97
VPS17YOR132W YJR111CP47148 283 aaKnown RBP2.73□□□□□ -1.97
VPS17YOR132W COQ5P49017 307 aa2.73□□□□□ -1.97
VPS17YOR132W YGL204CP53089 101 aa2.73□□□□□ -1.97
VPS17YOR132W SDS23P53172 527 aa2.73□□□□□ -1.97
VPS17YOR132W YNL046WP53956 172 aa2.73□□□□□ -1.97
VPS17YOR132W YDR248CQ03786 193 aa2.73□□□□□ -1.97
VPS17YOR132W YOR385WQ08909 290 aa2.73□□□□□ -1.97
VPS17YOR132W YLR050CQ12155 161 aaKnown RBP2.73□□□□□ -1.97
VPS17YOR132W HMS1Q12398 434 aa2.73□□□□□ -1.97
VPS17YOR132W RAX2Q12465 1220 aa2.73□□□□□ -1.97
VPS17YOR132W IGO2Q9P305 131 aa2.73□□□□□ -1.97
VPS17YOR132W SOD1P00445 154 aaKnown RBP2.73□□□□□ -1.97
VPS17YOR132W LSM12P38828 187 aaKnown RBP2.73□□□□□ -1.97
VPS17YOR132W PEX17P40155 199 aa2.73□□□□□ -1.97
VPS17YOR132W TIF34P40217 347 aaKnown RBP2.73□□□□□ -1.97
VPS17YOR132W GLR1P41921 483 aaKnown RBP2.73□□□□□ -1.97
VPS17YOR132W EGT2P42835 1041 aa2.73□□□□□ -1.97
VPS17YOR132W YFR054CP43622 192 aa2.73□□□□□ -1.97
VPS17YOR132W ALB1P47019 175 aaPredicted RBP2.73□□□□□ -1.97
VPS17YOR132W HAL1Q01766 294 aa2.73□□□□□ -1.97
VPS17YOR132W LIP2Q06005 328 aa2.73□□□□□ -1.97
VPS17YOR132W ANT1Q06497 328 aa2.73□□□□□ -1.97
VPS17YOR132W YLR031WQ07978 186 aa2.73□□□□□ -1.97
VPS17YOR132W YOL024WQ08172 172 aa2.73□□□□□ -1.97
VPS17YOR132W MSA1Q08471 629 aa2.73□□□□□ -1.97
VPS17YOR132W YOR186WQ08560 144 aa2.73□□□□□ -1.97
VPS17YOR132W ODC2Q99297 307 aa2.73□□□□□ -1.97
VPS17YOR132W REP2P03872 296 aa2.72□□□□□ -1.97
VPS17YOR132W SGA1P08019 549 aa2.72□□□□□ -1.97
VPS17YOR132W LDS1P31379 325 aa2.72□□□□□ -1.97
VPS17YOR132W FAB1P34756 2278 aa2.72□□□□□ -1.97
VPS17YOR132W MRPL27P36526 146 aaPredicted RBP2.72□□□□□ -1.97
VPS17YOR132W CIS3P47001 227 aa2.72□□□□□ -1.97
VPS17YOR132W GPI14P47088 403 aaKnown RBP2.72□□□□□ -1.97
VPS17YOR132W MOG1P47123 218 aa2.72□□□□□ -1.97
VPS17YOR132W SNN1P48232 102 aa2.72□□□□□ -1.97
VPS17YOR132W BNS1P50084 137 aa2.72□□□□□ -1.97
VPS17YOR132W YGL034CP53186 121 aa2.72□□□□□ -1.97
VPS17YOR132W YGR018CP53211 109 aa2.72□□□□□ -1.97
VPS17YOR132W RSM27P53305 110 aa2.72□□□□□ -1.97
VPS17YOR132W MPA43P53583 542 aaPredicted RBP2.72□□□□□ -1.97
VPS17YOR132W NCE101Q02820 53 aa2.72□□□□□ -1.97
VPS17YOR132W YPR174CQ06616 221 aaPredicted RBP2.72□□□□□ -1.97
VPS17YOR132W YPL278CQ08990 100 aa2.72□□□□□ -1.97
VPS17YOR132W IZH2Q12442 317 aa2.72□□□□□ -1.97
VPS17YOR132W YHR139C-AO13536 103 aa2.71□□□□□ -1.98
VPS17YOR132W PCL1P24867 279 aa2.71□□□□□ -1.98
VPS17YOR132W STP22P25604 385 aa2.71□□□□□ -1.98
VPS17YOR132W AGA2P32781 87 aa2.71□□□□□ -1.98
VPS17YOR132W UTH1P36135 365 aa2.71□□□□□ -1.98
VPS17YOR132W ECM14P38836 430 aa2.71□□□□□ -1.98
VPS17YOR132W NSG1P38837 291 aa2.71□□□□□ -1.98
VPS17YOR132W GCV3P39726 170 aaPredicted RBP2.71□□□□□ -1.98
VPS17YOR132W SYS1P41544 203 aa2.71□□□□□ -1.98
VPS17YOR132W CCC1P47818 322 aa2.71□□□□□ -1.98
VPS17YOR132W EST3Q03096 181 aa2.71□□□□□ -1.98
VPS17YOR132W YOR376WQ08900 122 aa2.71□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 24.4 ms