RNA–Protein interactions for RNA: YNL242W

ATG2, Transcript of Peripheral membrane protein required for autophagic vesicle formation, yeast

Gene ATG2, Length 4,779 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG2	YNL242W	MSL1	P40567	111 aa	Predicted RBP	3.5	□□□□□ -1.85
ATG2	YNL242W	TTI2	P47168	421 aa		3.5	□□□□□ -1.85
ATG2	YNL242W	YIP1	P53039	248 aa		3.5	□□□□□ -1.85
ATG2	YNL242W	SMX3	P54999	86 aa	Predicted RBP	3.5	□□□□□ -1.85
ATG2	YNL242W	DYN2	Q02647	92 aa		3.5	□□□□□ -1.85
ATG2	YNL242W	RPL21A	Q02753	160 aa	Known RBP	3.5	□□□□□ -1.85
ATG2	YNL242W	YPL080C	Q02826	108 aa		3.5	□□□□□ -1.85
ATG2	YNL242W	ROT1	Q03691	256 aa		3.5	□□□□□ -1.85
ATG2	YNL242W	YMR082C	Q04276	118 aa		3.5	□□□□□ -1.85
ATG2	YNL242W	RRS1	Q08746	203 aa	Known RBP	3.5	□□□□□ -1.85
ATG2	YNL242W	RPL21B	Q12672	160 aa	Known RBP	3.5	□□□□□ -1.85
ATG2	YNL242W	CPR1	P14832	162 aa	Known RBP	3.5	□□□□□ -1.85
ATG2	YNL242W	RFA3	P26755	122 aa	Known RBP	3.5	□□□□□ -1.85
ATG2	YNL242W	RPL34B	P40525	121 aa	Known RBP	3.5	□□□□□ -1.85
ATG2	YNL242W	SMD3	P43321	101 aa	Known RBP	3.5	□□□□□ -1.85
ATG2	YNL242W	HRI1	Q05905	244 aa	Known RBP	3.5	□□□□□ -1.85
ATG2	YNL242W	GPX1	P36014	167 aa		3.49	□□□□□ -1.85
ATG2	YNL242W	PAM17	P36147	197 aa		3.49	□□□□□ -1.85
ATG2	YNL242W	MTO1	P53070	669 aa		3.49	□□□□□ -1.85
ATG2	YNL242W	CRZ1	P53968	678 aa		3.49	□□□□□ -1.85
ATG2	YNL242W	PAU23	Q07987	124 aa		3.49	□□□□□ -1.85
ATG2	YNL242W	PAU17	Q12370	124 aa		3.49	□□□□□ -1.85
ATG2	YNL242W	COA2	Q3E823	68 aa		3.49	□□□□□ -1.85
ATG2	YNL242W	RPI1	P23250	407 aa	Known RBP	3.49	□□□□□ -1.85
ATG2	YNL242W	ATF1	P40353	525 aa		3.49	□□□□□ -1.85
ATG2	YNL242W	ELC1	Q03071	99 aa		3.49	□□□□□ -1.85
ATG2	YNL242W	ATG40	Q99325	256 aa		3.49	□□□□□ -1.85
ATG2	YNL242W	STT4	P37297	1900 aa		3.49	□□□□□ -1.85
ATG2	YNL242W	YPR170W-B	P0C5R9	85 aa		3.49	□□□□□ -1.85
ATG2	YNL242W	REC114	P32841	428 aa		3.49	□□□□□ -1.85
ATG2	YNL242W	NNK1	P36003	928 aa		3.49	□□□□□ -1.85
ATG2	YNL242W	YNL208W	P40159	199 aa	Known RBP	3.49	□□□□□ -1.85
ATG2	YNL242W	PRE5	P40302	234 aa	Known RBP	3.49	□□□□□ -1.85
ATG2	YNL242W	PRY3	P47033	881 aa		3.49	□□□□□ -1.85
ATG2	YNL242W	MSO1	P53604	210 aa	Known RBP	3.49	□□□□□ -1.85
ATG2	YNL242W	YMR181C	Q03231	154 aa		3.49	□□□□□ -1.85
ATG2	YNL242W	BSC6	Q08280	497 aa		3.49	□□□□□ -1.85
ATG2	YNL242W	YOR105W	Q08504	108 aa		3.49	□□□□□ -1.85
ATG2	YNL242W	SEC4	P07560	215 aa	Known RBP	3.48	□□□□□ -1.85
ATG2	YNL242W	CDC43	P18898	376 aa		3.48	□□□□□ -1.85
ATG2	YNL242W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	3.48	□□□□□ -1.85	not detected
ATG2	YNL242W	ICS2	P38284	255 aa		3.48	□□□□□ -1.85
ATG2	YNL242W	IRC13	Q08630	104 aa		3.48	□□□□□ -1.85
ATG2	YNL242W	SWT1	Q12104	458 aa		3.48	□□□□□ -1.85
ATG2	YNL242W	PCL1	P24867	279 aa		3.48	□□□□□ -1.85
ATG2	YNL242W	YOR062C	P36025	268 aa		3.48	□□□□□ -1.85
ATG2	YNL242W	DOG2	P38773	246 aa		3.48	□□□□□ -1.85
ATG2	YNL242W	YCK3	P39962	524 aa		3.48	□□□□□ -1.85
ATG2	YNL242W	TDA4	P47153	279 aa		3.48	□□□□□ -1.85
ATG2	YNL242W	YGL260W	P53056	76 aa		3.48	□□□□□ -1.85
ATG2	YNL242W	YCR075W-A	Q3E830	75 aa		3.48	□□□□□ -1.85
ATG2	YNL242W	TOR1	P35169	2470 aa		3.48	□□□□□ -1.85
ATG2	YNL242W	CUP2	P15315	225 aa		3.48	□□□□□ -1.85
ATG2	YNL242W	FCY2	P17064	533 aa		3.48	□□□□□ -1.85
ATG2	YNL242W	ANS1	P38832	159 aa		3.48	□□□□□ -1.85
ATG2	YNL242W	BUD8	P41698	603 aa		3.48	□□□□□ -1.85
ATG2	YNL242W	YNL092W	P53934	400 aa		3.48	□□□□□ -1.85
ATG2	YNL242W	CTK2	P46962	323 aa		3.48	□□□□□ -1.85
ATG2	YNL242W	LOA1	Q06508	300 aa		3.48	□□□□□ -1.85
ATG2	YNL242W	MCH4	Q08268	501 aa		3.48	□□□□□ -1.85
ATG2	YNL242W	YDL157C	Q12082	118 aa		3.48	□□□□□ -1.85
ATG2	YNL242W	COX1	P00401	534 aa		3.47	□□□□□ -1.85
ATG2	YNL242W	YHR130C	P38834	111 aa		3.47	□□□□□ -1.85
ATG2	YNL242W	YIL163C	P40448	117 aa		3.47	□□□□□ -1.85
ATG2	YNL242W	COX18	P53239	316 aa		3.47	□□□□□ -1.85
ATG2	YNL242W	RFM1	Q12192	310 aa		3.47	□□□□□ -1.85
ATG2	YNL242W	UTP23	Q12339	254 aa	Known RBP	3.47	□□□□□ -1.85
ATG2	YNL242W	JID1	Q12350	301 aa		3.47	□□□□□ -1.85
ATG2	YNL242W	POM34	Q12445	299 aa		3.47	□□□□□ -1.85
ATG2	YNL242W	ISD11	Q6Q560	94 aa		3.47	□□□□□ -1.85
ATG2	YNL242W	YSR3	P23501	404 aa		3.47	□□□□□ -1.85
ATG2	YNL242W	REC104	P33323	182 aa		3.47	□□□□□ -1.85
ATG2	YNL242W	YKL107W	P34251	309 aa		3.47	□□□□□ -1.85
ATG2	YNL242W	RPP1	P38786	293 aa		3.47	□□□□□ -1.85
ATG2	YNL242W	TEM1	P38987	245 aa		3.47	□□□□□ -1.85
ATG2	YNL242W	IZH1	Q03419	316 aa		3.47	□□□□□ -1.85
ATG2	YNL242W	YDR344C	Q05510	147 aa		3.47	□□□□□ -1.85
ATG2	YNL242W	MRPL51	Q06090	140 aa	Predicted RBP	3.47	□□□□□ -1.85
ATG2	YNL242W	IRC19	Q07843	230 aa		3.47	□□□□□ -1.85
ATG2	YNL242W	PAM18	Q07914	168 aa		3.47	□□□□□ -1.85
ATG2	YNL242W	YBL112C	Q3E7Y4	105 aa		3.47	□□□□□ -1.85
ATG2	YNL242W	UTP20	P35194	2493 aa	Known RBP	3.47	□□□□□ -1.85
ATG2	YNL242W	YLR302C	O13544	120 aa		3.47	□□□□□ -1.85
ATG2	YNL242W	PMU1	P36069	295 aa		3.47	□□□□□ -1.85
ATG2	YNL242W	CAB4	P53332	305 aa		3.47	□□□□□ -1.85
ATG2	YNL242W	DUG3	P53871	357 aa		3.47	□□□□□ -1.85
ATG2	YNL242W	TRI1	Q05024	226 aa		3.47	□□□□□ -1.85
ATG2	YNL242W	PIN2	Q12057	282 aa		3.47	□□□□□ -1.85
ATG2	YNL242W	GLT1	Q12680	2145 aa	Known RBP	3.47	□□□□□ -1.85
ATG2	YNL242W	YLR363W-A	Q3E747	85 aa		3.47	□□□□□ -1.85
ATG2	YNL242W	MST28	P39552	234 aa		3.47	□□□□□ -1.85
ATG2	YNL242W	BNA2	P47125	453 aa		3.47	□□□□□ -1.85
ATG2	YNL242W	UBC13	P52490	153 aa		3.47	□□□□□ -1.85
ATG2	YNL242W	YDR102C	Q03864	110 aa		3.47	□□□□□ -1.85
ATG2	YNL242W	HPF1	Q05164	967 aa		3.47	□□□□□ -1.85
ATG2	YNL242W	NAG1	Q8TGN9	163 aa		3.47	□□□□□ -1.85
ATG2	YNL242W	CYC7	P00045	113 aa		3.46	□□□□□ -1.86
ATG2	YNL242W	HYP2	P23301	157 aa	Known RBP	3.46	□□□□□ -1.86
ATG2	YNL242W	ERG2	P32352	222 aa		3.46	□□□□□ -1.86
ATG2	YNL242W	ECM14	P38836	430 aa		3.46	□□□□□ -1.86

Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms