RNA–Protein interactions for RNA: YMR247C

RKR1, Transcript of RING domain E3 ubiquitin ligase, yeastyeast

Gene RKR1, Length 4,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RKR1YMR247C GON7P46984 123 aa0.6□□□□□ -2.31
RKR1YMR247C SLM2P53955 656 aa0.6□□□□□ -2.31
RKR1YMR247C SHH3Q04487 196 aa0.6□□□□□ -2.31
RKR1YMR247C YOR015WQ12169 119 aa0.6□□□□□ -2.31
RKR1YMR247C YBL112CQ3E7Y4 105 aa0.6□□□□□ -2.31
RKR1YMR247C ARG80P07249 177 aa0.59□□□□□ -2.31
RKR1YMR247C YBR121C-AP0C5L4 52 aa0.59□□□□□ -2.31
RKR1YMR247C PBN1P25580 416 aa0.59□□□□□ -2.31
RKR1YMR247C EHD3P28817 500 aa0.59□□□□□ -2.31
RKR1YMR247C MAK5P38112 773 aaPredicted RBP0.59□□□□□ -2.31
RKR1YMR247C EGD2P38879 174 aaKnown RBP0.59□□□□□ -2.31
RKR1YMR247C DML1Q03652 475 aa0.59□□□□□ -2.31
RKR1YMR247C YDR249CQ03787 373 aa0.59□□□□□ -2.31
RKR1YMR247C YMR166CQ03829 368 aa0.59□□□□□ -2.31
RKR1YMR247C HNT1Q04344 158 aaKnown RBP0.59□□□□□ -2.31
RKR1YMR247C BRX1Q08235 291 aaKnown RBP0.59□□□□□ -2.31
RKR1YMR247C JLP1Q12358 412 aa0.59□□□□□ -2.31
RKR1YMR247C FPR1P20081 114 aaKnown RBP0.59□□□□□ -2.31
RKR1YMR247C SEC14P24280 304 aaKnown RBP0.59□□□□□ -2.31
RKR1YMR247C SUI1P32911 108 aaKnown RBP0.59□□□□□ -2.31
RKR1YMR247C CAF4P36130 643 aa0.59□□□□□ -2.31
RKR1YMR247C YER076CP40049 302 aa0.59□□□□□ -2.31
RKR1YMR247C YRB2P40517 327 aa0.59□□□□□ -2.31
RKR1YMR247C YFH7P43591 353 aa0.59□□□□□ -2.31
RKR1YMR247C PAC10P48363 199 aa0.59□□□□□ -2.31
RKR1YMR247C BXI1P48558 297 aa0.59□□□□□ -2.31
RKR1YMR247C RAD17P48581 401 aa0.59□□□□□ -2.31
RKR1YMR247C MDM34P53083 459 aa0.59□□□□□ -2.31
RKR1YMR247C MPA43P53583 542 aaPredicted RBP0.59□□□□□ -2.31
RKR1YMR247C YNL140CP53910 189 aa0.59□□□□□ -2.31
RKR1YMR247C MDM35O60200 86 aa0.59□□□□□ -2.32
RKR1YMR247C GCN3P14741 305 aa0.59□□□□□ -2.32
RKR1YMR247C RPB3P16370 318 aaKnown RBP0.59□□□□□ -2.32
RKR1YMR247C CNB1P25296 175 aa0.59□□□□□ -2.32
RKR1YMR247C PPA2P28239 310 aa0.59□□□□□ -2.32
RKR1YMR247C AST2P39945 430 aaKnown RBP0.59□□□□□ -2.32
RKR1YMR247C IRC22P40006 225 aa0.59□□□□□ -2.32
RKR1YMR247C MSS2P40990 351 aa0.59□□□□□ -2.32
RKR1YMR247C ARO8P53090 500 aaKnown RBP0.59□□□□□ -2.32
RKR1YMR247C TIM13P53299 105 aa0.59□□□□□ -2.32
RKR1YMR247C ATP19P81451 68 aa0.59□□□□□ -2.32
RKR1YMR247C TMA20P89886 181 aaPredicted RBP0.59□□□□□ -2.32
RKR1YMR247C GRX3Q03835 250 aa0.59□□□□□ -2.32
RKR1YMR247C YMR244WQ04018 355 aa0.59□□□□□ -2.32
RKR1YMR247C SML1Q04964 104 aa0.59□□□□□ -2.32
RKR1YMR247C ATG39Q06159 398 aa0.59□□□□□ -2.32
RKR1YMR247C GCY1P14065 312 aaKnown RBP RIP-Chip data0.59□□□□□ -2.32not detected
RKR1YMR247C YCR102CP25608 368 aa0.59□□□□□ -2.32
RKR1YMR247C YBL010CP32788 280 aa0.59□□□□□ -2.32
RKR1YMR247C YFR054CP43622 192 aa0.59□□□□□ -2.32
RKR1YMR247C YJL027CP47063 138 aaPredicted RBP0.59□□□□□ -2.32
RKR1YMR247C MGA1P53050 456 aa0.59□□□□□ -2.32
RKR1YMR247C YGR164WP53291 111 aa0.59□□□□□ -2.32
RKR1YMR247C PET191Q02772 108 aa0.59□□□□□ -2.32
RKR1YMR247C YPR174CQ06616 221 aaPredicted RBP0.59□□□□□ -2.32
RKR1YMR247C MSA1Q08471 629 aa0.59□□□□□ -2.32
RKR1YMR247C BNI1P41832 1953 aa0.58□□□□□ -2.32
RKR1YMR247C PRE1P22141 198 aaKnown RBP0.58□□□□□ -2.32
RKR1YMR247C YCR087C-AP37263 153 aa0.58□□□□□ -2.32
RKR1YMR247C FES1P38260 290 aa0.58□□□□□ -2.32
RKR1YMR247C YHR180WP38868 163 aa0.58□□□□□ -2.32
RKR1YMR247C YEA4P40004 342 aa0.58□□□□□ -2.32
RKR1YMR247C ARP3P47117 449 aaKnown RBP0.58□□□□□ -2.32
RKR1YMR247C YGL204CP53089 101 aa0.58□□□□□ -2.32
RKR1YMR247C OST6Q03723 332 aa0.58□□□□□ -2.32
RKR1YMR247C TRM12Q04235 462 aa0.58□□□□□ -2.32
RKR1YMR247C LPP1Q04396 274 aa0.58□□□□□ -2.32
RKR1YMR247C FLO11P08640 1367 aa0.58□□□□□ -2.32
RKR1YMR247C MATALPHA1P0CY06 175 aa0.58□□□□□ -2.32
RKR1YMR247C HMLALPHA1P0CY07 175 aa0.58□□□□□ -2.32
RKR1YMR247C SEC11P15367 167 aa0.58□□□□□ -2.32
RKR1YMR247C AHT1P29589 182 aa0.58□□□□□ -2.32
RKR1YMR247C SEC17P32602 292 aa0.58□□□□□ -2.32
RKR1YMR247C SMB1P40018 196 aaKnown RBP0.58□□□□□ -2.32
RKR1YMR247C NSA2P40078 261 aaKnown RBP0.58□□□□□ -2.32
RKR1YMR247C RFC2P40348 353 aa0.58□□□□□ -2.32
RKR1YMR247C CAT5P41735 233 aa0.58□□□□□ -2.32
RKR1YMR247C DCV1P43595 202 aa0.58□□□□□ -2.32
RKR1YMR247C ADO1P47143 340 aaKnown RBP0.58□□□□□ -2.32
RKR1YMR247C MIX17Q03667 156 aa0.58□□□□□ -2.32
RKR1YMR247C UPS1Q05776 175 aa0.58□□□□□ -2.32
RKR1YMR247C NIP7Q08962 181 aaKnown RBP0.58□□□□□ -2.32
RKR1YMR247C ATO3Q12359 275 aa0.58□□□□□ -2.32
RKR1YMR247C BUD23P25627 275 aaPredicted RBP0.58□□□□□ -2.32
RKR1YMR247C IDH1P28834 360 aaKnown RBP RIP-Chip data0.58□□□□□ -2.32not detected
RKR1YMR247C YGL193CP53097 103 aa0.58□□□□□ -2.32
RKR1YMR247C NQM1P53228 333 aaPredicted RBP0.58□□□□□ -2.32
RKR1YMR247C UBC7Q02159 165 aa0.58□□□□□ -2.32
RKR1YMR247C LOA1Q06508 300 aa0.58□□□□□ -2.32
RKR1YMR247C RFU1Q08003 200 aa0.58□□□□□ -2.32
RKR1YMR247C YOR376WQ08900 122 aa0.58□□□□□ -2.32
RKR1YMR247C MPD1Q12404 318 aaKnown RBP0.58□□□□□ -2.32
RKR1YMR247C QCR7P00128 127 aa0.58□□□□□ -2.32
RKR1YMR247C RHO1P06780 209 aaKnown RBP0.58□□□□□ -2.32
RKR1YMR247C PET54P10834 293 aa0.58□□□□□ -2.32
RKR1YMR247C MRPL17P36528 281 aa0.58□□□□□ -2.32
RKR1YMR247C MIC12P38341 106 aa0.58□□□□□ -2.32
RKR1YMR247C IKI1P38874 309 aa0.58□□□□□ -2.32
RKR1YMR247C MTW1P39731 289 aa0.58□□□□□ -2.32
RKR1YMR247C BOL2P53082 120 aa0.58□□□□□ -2.32
Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms