RNA–Protein interactions for RNA: YMR200W

ROT1, Transcript of Molecular chaperone involved in protein folding in ER, yeastyeast

Gene ROT1, Length 771 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROT1YMR200W YPR114WQ06107 315 aa3.71□□□□□ -1.82
ROT1YMR200W IES3Q12345 250 aa3.71□□□□□ -1.82
ROT1YMR200W YLR412C-AQ3E742 68 aa3.71□□□□□ -1.82
ROT1YMR200W FLO11P08640 1367 aa3.71□□□□□ -1.82
ROT1YMR200W CBP6P07253 162 aaPredicted RBP3.7□□□□□ -1.82
ROT1YMR200W NOP1P15646 327 aaKnown RBP3.7□□□□□ -1.82
ROT1YMR200W ATP15P21306 62 aa3.7□□□□□ -1.82
ROT1YMR200W SUI1P32911 108 aaKnown RBP3.7□□□□□ -1.82
ROT1YMR200W LHP1P33399 275 aaKnown RBP3.7□□□□□ -1.82
ROT1YMR200W GPI18P38211 433 aa3.7□□□□□ -1.82
ROT1YMR200W RFS1P38234 210 aaKnown RBP3.7□□□□□ -1.82
ROT1YMR200W TRS20P38334 175 aa3.7□□□□□ -1.82
ROT1YMR200W SAE3P89114 91 aa3.7□□□□□ -1.82
ROT1YMR200W YMR099CQ03161 297 aaKnown RBP3.7□□□□□ -1.82
ROT1YMR200W YOR214CQ12282 236 aa3.7□□□□□ -1.82
ROT1YMR200W YLR118CQ12354 227 aa3.7□□□□□ -1.82
ROT1YMR200W YBR298C-AQ8TGK4 73 aa3.7□□□□□ -1.82
ROT1YMR200W YPK9Q12697 1472 aa3.7□□□□□ -1.82
ROT1YMR200W UFD4P33202 1483 aa3.69□□□□□ -1.82
ROT1YMR200W REP2P03872 296 aa3.69□□□□□ -1.82
ROT1YMR200W PHO13P19881 312 aa3.69□□□□□ -1.82
ROT1YMR200W PTC1P35182 281 aa3.69□□□□□ -1.82
ROT1YMR200W YHR140WP38842 239 aa3.69□□□□□ -1.82
ROT1YMR200W APJ1P53940 528 aa3.69□□□□□ -1.82
ROT1YMR200W PSF1Q12488 208 aa3.69□□□□□ -1.82
ROT1YMR200W SCC2Q04002 1493 aa3.68□□□□□ -1.82
ROT1YMR200W YER134CP40081 178 aa3.68□□□□□ -1.82
ROT1YMR200W YJL218WP40892 196 aaKnown RBP3.68□□□□□ -1.82
ROT1YMR200W SFT1P43682 97 aa3.68□□□□□ -1.82
ROT1YMR200W RSM27P53305 110 aa3.68□□□□□ -1.82
ROT1YMR200W YNL033WP53964 284 aa3.68□□□□□ -1.82
ROT1YMR200W YNL019CP53975 284 aa3.68□□□□□ -1.82
ROT1YMR200W AIM11P87275 137 aa3.68□□□□□ -1.82
ROT1YMR200W NAT3Q06504 195 aa3.68□□□□□ -1.82
ROT1YMR200W ESP1Q03018 1630 aa3.68□□□□□ -1.82
ROT1YMR200W RPO31P04051 1460 aa3.67□□□□□ -1.82
ROT1YMR200W YCF1P39109 1515 aaKnown RBP3.67□□□□□ -1.82
ROT1YMR200W SGA1P08019 549 aa3.67□□□□□ -1.82
ROT1YMR200W HYM1P32464 399 aa3.67□□□□□ -1.82
ROT1YMR200W ECM34P38728 170 aa3.67□□□□□ -1.82
ROT1YMR200W VTC1P40046 129 aaRIP-Chip data3.67□□□□□ -1.82not detected
ROT1YMR200W AIF1P52923 378 aa3.67□□□□□ -1.82
ROT1YMR200W YGR017WP53210 297 aa3.67□□□□□ -1.82
ROT1YMR200W TMA23Q03525 211 aa3.67□□□□□ -1.82
ROT1YMR200W SPG3Q04398 127 aaPredicted RBP3.67□□□□□ -1.82
ROT1YMR200W MCH1Q07376 486 aa3.67□□□□□ -1.82
ROT1YMR200W TIM9O74700 87 aa3.66□□□□□ -1.82
ROT1YMR200W RPL9AP05738 191 aaKnown RBP3.66□□□□□ -1.82
ROT1YMR200W COX10P21592 462 aa3.66□□□□□ -1.82
ROT1YMR200W TOM40P23644 387 aaKnown RBP3.66□□□□□ -1.82
ROT1YMR200W SHB17P36136 271 aaKnown RBP3.66□□□□□ -1.82
ROT1YMR200W YHL026CP38740 315 aa3.66□□□□□ -1.82
ROT1YMR200W YHR125WP38831 101 aa3.66□□□□□ -1.82
ROT1YMR200W YNL200CP40165 246 aaKnown RBP3.66□□□□□ -1.82
ROT1YMR200W ARC15P40518 154 aaRIP-Chip data3.66□□□□□ -1.82not detected
ROT1YMR200W RPL9BP51401 191 aaKnown RBP3.66□□□□□ -1.82
ROT1YMR200W SPP41P38904 1435 aa3.65□□□□□ -1.83
ROT1YMR200W YAR023CD6VPM8 179 aa3.65□□□□□ -1.83
ROT1YMR200W CPA1P07258 411 aaKnown RBP3.65□□□□□ -1.83
ROT1YMR200W NSP1P14907 823 aaKnown RBP3.65□□□□□ -1.83
ROT1YMR200W HTD2P38790 280 aaKnown RBP3.65□□□□□ -1.83
ROT1YMR200W DSK2P48510 373 aa3.65□□□□□ -1.83
ROT1YMR200W RPS12P48589 143 aaKnown RBP3.65□□□□□ -1.83
ROT1YMR200W BUD25P85052 153 aa3.65□□□□□ -1.83
ROT1YMR200W RSM10Q03201 203 aa3.65□□□□□ -1.83
ROT1YMR200W YDR391CQ04170 232 aa3.65□□□□□ -1.83
ROT1YMR200W COX4P04037 155 aa3.64□□□□□ -1.83
ROT1YMR200W PCL1P24867 279 aa3.64□□□□□ -1.83
ROT1YMR200W YBL010CP32788 280 aa3.64□□□□□ -1.83
ROT1YMR200W YKR070WP36151 352 aaKnown RBP3.64□□□□□ -1.83
ROT1YMR200W MRPL17P36528 281 aa3.64□□□□□ -1.83
ROT1YMR200W SWD3P38123 315 aa3.64□□□□□ -1.83
ROT1YMR200W YBR220CP38318 560 aa3.64□□□□□ -1.83
ROT1YMR200W FYV4P38783 130 aaPredicted RBP3.64□□□□□ -1.83
ROT1YMR200W SBH1P52870 82 aa3.64□□□□□ -1.83
ROT1YMR200W YDR274CP87283 123 aa3.64□□□□□ -1.83
ROT1YMR200W FYV12Q08559 129 aa3.64□□□□□ -1.83
ROT1YMR200W MYO2P19524 1574 aaKnown RBP3.63□□□□□ -1.83
ROT1YMR200W TSC11P40061 1430 aa3.63□□□□□ -1.83
ROT1YMR200W ADK1P07170 222 aaKnown RBP3.63□□□□□ -1.83
ROT1YMR200W AHT1P29589 182 aa3.63□□□□□ -1.83
ROT1YMR200W YRA2P36036 203 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
ROT1YMR200W RPL14AP36105 138 aaKnown RBP3.63□□□□□ -1.83
ROT1YMR200W MRPL27P36526 146 aaPredicted RBP3.63□□□□□ -1.83
ROT1YMR200W RPL14BP38754 138 aaKnown RBP3.63□□□□□ -1.83
ROT1YMR200W VPS28Q02767 242 aa3.63□□□□□ -1.83
ROT1YMR200W GAL83Q04739 417 aa3.63□□□□□ -1.83
ROT1YMR200W FSF1Q12029 327 aaKnown RBP3.63□□□□□ -1.83
ROT1YMR200W YCL001W-BQ96VH2 84 aa3.63□□□□□ -1.83
ROT1YMR200W RAD10P06838 210 aa3.62□□□□□ -1.83
ROT1YMR200W YOR062CP36025 268 aa3.62□□□□□ -1.83
ROT1YMR200W EST3Q03096 181 aa3.62□□□□□ -1.83
ROT1YMR200W ZEO1Q08245 113 aa3.62□□□□□ -1.83
ROT1YMR200W ATO3Q12359 275 aa3.62□□□□□ -1.83
ROT1YMR200W ODC2Q99297 307 aa3.62□□□□□ -1.83
ROT1YMR200W YOL085CQ99345 113 aa3.62□□□□□ -1.83
ROT1YMR200W YER039C-AP0CD97 72 aa3.61□□□□□ -1.83
ROT1YMR200W YER188WP40103 239 aa3.61□□□□□ -1.83
ROT1YMR200W YKR005CQ02203 525 aa3.61□□□□□ -1.83
ROT1YMR200W MRPS8Q03799 155 aa3.61□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 46.7 ms