RNA–Protein interactions for RNA: YKR004C

ECM9, Transcript of Non-essential protein of unknown function, yeast

Gene ECM9, Length 1,134 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECM9	YKR004C	MPM1	P40364	252 aa		0.59	□□□□□ -2.31
ECM9	YKR004C	TMA22	P47089	198 aa	Predicted RBP	0.59	□□□□□ -2.31
ECM9	YKR004C	TIM11	P81449	96 aa	Predicted RBP	0.59	□□□□□ -2.31
ECM9	YKR004C	PIR1	Q03178	341 aa		0.59	□□□□□ -2.31
ECM9	YKR004C	SBH1	P52870	82 aa		0.58	□□□□□ -2.32
ECM9	YKR004C	DAS2	Q12084	232 aa		0.58	□□□□□ -2.32
ECM9	YKR004C	CCW12	Q12127	133 aa		0.58	□□□□□ -2.32
ECM9	YKR004C	YOR015W	Q12169	119 aa		0.58	□□□□□ -2.32
ECM9	YKR004C	FMP49	A0A023PZB3	126 aa		0.57	□□□□□ -2.32
ECM9	YKR004C	RPS24A	P0CX31	135 aa	Known RBP	0.57	□□□□□ -2.32
ECM9	YKR004C	RPS24B	P0CX32	135 aa	Known RBP	0.57	□□□□□ -2.32
ECM9	YKR004C	NTG1	P31378	399 aa		0.57	□□□□□ -2.32
ECM9	YKR004C	ETR1	P38071	380 aa		0.57	□□□□□ -2.32
ECM9	YKR004C	YAR064W	P39563	99 aa		0.57	□□□□□ -2.32
ECM9	YKR004C	NSA2	P40078	261 aa	Known RBP	0.57	□□□□□ -2.32
ECM9	YKR004C	YIL102C	P40488	101 aa		0.57	□□□□□ -2.32
ECM9	YKR004C	NSE4	P43124	402 aa		0.57	□□□□□ -2.32
ECM9	YKR004C	SBH2	P52871	88 aa		0.57	□□□□□ -2.32
ECM9	YKR004C	ELP6	Q04868	273 aa		0.57	□□□□□ -2.32
ECM9	YKR004C	UPS1	Q05776	175 aa		0.57	□□□□□ -2.32
ECM9	YKR004C	YOL024W	Q08172	172 aa		0.57	□□□□□ -2.32
ECM9	YKR004C	ATP20	Q12233	115 aa		0.57	□□□□□ -2.32
ECM9	YKR004C	ADE1	P27616	306 aa		0.56	□□□□□ -2.32
ECM9	YKR004C	YBL010C	P32788	280 aa		0.56	□□□□□ -2.32
ECM9	YKR004C	YOR342C	Q12182	319 aa		0.56	□□□□□ -2.32
ECM9	YKR004C	YKT6	P36015	200 aa	Known RBP	0.55	□□□□□ -2.32
ECM9	YKR004C	RRT1	P38192	103 aa		0.55	□□□□□ -2.32
ECM9	YKR004C	NSG1	P38837	291 aa		0.55	□□□□□ -2.32
ECM9	YKR004C	DCV1	P43595	202 aa		0.55	□□□□□ -2.32
ECM9	YKR004C	RTC4	P53850	401 aa		0.55	□□□□□ -2.32
ECM9	YKR004C	PGA1	P53896	198 aa		0.55	□□□□□ -2.32
ECM9	YKR004C	YHP1	Q04116	353 aa		0.55	□□□□□ -2.32
ECM9	YKR004C	DGK1	Q12382	290 aa		0.55	□□□□□ -2.32
ECM9	YKR004C	YLR412C-A	Q3E742	68 aa		0.55	□□□□□ -2.32
ECM9	YKR004C	YLR422W	Q06409	1932 aa		0.55	□□□□□ -2.32
ECM9	YKR004C	NRK1	P53915	240 aa		0.54	□□□□□ -2.32
ECM9	YKR004C	DML1	Q03652	475 aa		0.54	□□□□□ -2.32
ECM9	YKR004C	YMR030W-A	Q3E760	96 aa		0.54	□□□□□ -2.32
ECM9	YKR004C	YPR014C	Q6B0W2	109 aa		0.54	□□□□□ -2.32
ECM9	YKR004C	DUR1,2	P32528	1835 aa	Known RBP	0.54	□□□□□ -2.32
ECM9	YKR004C	TAH1	P25638	111 aa	Predicted RBP	0.53	□□□□□ -2.32
ECM9	YKR004C	ATG41	Q12048	136 aa		0.53	□□□□□ -2.32
ECM9	YKR004C	TRX3	P25372	127 aa		0.52	□□□□□ -2.33
ECM9	YKR004C	AIM34	Q03673	198 aa		0.52	□□□□□ -2.33
ECM9	YKR004C	GAL83	Q04739	417 aa		0.52	□□□□□ -2.33
ECM9	YKR004C	CCS1	P40202	249 aa	Known RBP	0.51	□□□□□ -2.33
ECM9	YKR004C	NOC4	Q06512	552 aa	Predicted RBP	0.51	□□□□□ -2.33
ECM9	YKR004C	RAD9	P14737	1309 aa		0.5	□□□□□ -2.33
ECM9	YKR004C	MAK31	P23059	88 aa		0.5	□□□□□ -2.33
ECM9	YKR004C	HHT1	P61830	136 aa		0.5	□□□□□ -2.33
ECM9	YKR004C	MPD1	Q12404	318 aa	Known RBP	0.5	□□□□□ -2.33
ECM9	YKR004C	YDL085C-A	Q3E7B7	68 aa	Known RBP	0.5	□□□□□ -2.33
ECM9	YKR004C	YJR015W	P47090	510 aa		0.49	□□□□□ -2.33
ECM9	YKR004C	GRX5	Q02784	150 aa		0.49	□□□□□ -2.33
ECM9	YKR004C	RIM9	Q04734	239 aa		0.49	□□□□□ -2.33
ECM9	YKR004C	HSP30	P25619	332 aa		0.48	□□□□□ -2.33
ECM9	YKR004C	CPR5	P35176	225 aa		0.48	□□□□□ -2.33
ECM9	YKR004C	CAF4	P36130	643 aa		0.48	□□□□□ -2.33
ECM9	YKR004C	CGR1	P53188	120 aa		0.48	□□□□□ -2.33
ECM9	YKR004C	YOR381W-A	Q3E804	55 aa		0.48	□□□□□ -2.33
ECM9	YKR004C	JIP3	O13555	125 aa		0.47	□□□□□ -2.33
ECM9	YKR004C	AHC2	P25649	128 aa		0.47	□□□□□ -2.33
ECM9	YKR004C	SHB17	P36136	271 aa	Known RBP	0.47	□□□□□ -2.33
ECM9	YKR004C	YKR070W	P36151	352 aa	Known RBP	0.47	□□□□□ -2.33
ECM9	YKR004C	VPS28	Q02767	242 aa		0.47	□□□□□ -2.33
ECM9	YKR004C	AVO2	Q04749	426 aa		0.47	□□□□□ -2.33
ECM9	YKR004C	GRX8	Q05926	109 aa		0.47	□□□□□ -2.33
ECM9	YKR004C	BRX1	Q08235	291 aa	Known RBP	0.47	□□□□□ -2.33
ECM9	YKR004C	FYV4	P38783	130 aa	Predicted RBP	0.46	□□□□□ -2.34
ECM9	YKR004C	SHH4	Q06236	168 aa		0.46	□□□□□ -2.34
ECM9	YKR004C	YKL102C	P34249	101 aa		0.45	□□□□□ -2.34
ECM9	YKR004C	FMP32	P43557	207 aa		0.45	□□□□□ -2.34
ECM9	YKR004C	YDC1	Q02896	317 aa		0.45	□□□□□ -2.34
ECM9	YKR004C	TMA23	Q03525	211 aa		0.45	□□□□□ -2.34
ECM9	YKR004C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	0.44	□□□□□ -2.34	not detected
ECM9	YKR004C	APA2	P22108	325 aa		0.44	□□□□□ -2.34
ECM9	YKR004C	YCR001W	P25347	104 aa		0.44	□□□□□ -2.34
ECM9	YKR004C	YRA2	P36036	203 aa	Known RBP RIP-Chip data	0.44	□□□□□ -2.34	not detected
ECM9	YKR004C	YNL200C	P40165	246 aa	Known RBP	0.44	□□□□□ -2.34
ECM9	YKR004C	RFC2	P40348	353 aa		0.44	□□□□□ -2.34
ECM9	YKR004C	KEI1	Q06346	221 aa		0.44	□□□□□ -2.34
ECM9	YKR004C	YOL013W-A	P0C272	63 aa	Predicted RBP	0.43	□□□□□ -2.34
ECM9	YKR004C	SEC14	P24280	304 aa	Known RBP	0.43	□□□□□ -2.34
ECM9	YKR004C	YGL230C	P53074	147 aa		0.43	□□□□□ -2.34
ECM9	YKR004C	YKR005C	Q02203	525 aa		0.43	□□□□□ -2.34
ECM9	YKR004C	CWC21	Q03375	135 aa	Known RBP	0.43	□□□□□ -2.34
ECM9	YKR004C	GPI17	Q04080	534 aa		0.43	□□□□□ -2.34
ECM9	YKR004C	FCY1	Q12178	158 aa		0.43	□□□□□ -2.34
ECM9	YKR004C	YOR214C	Q12282	236 aa		0.43	□□□□□ -2.34
ECM9	YKR004C	PRE1	P22141	198 aa	Known RBP	0.42	□□□□□ -2.34
ECM9	YKR004C	YKR041W	P36134	250 aa		0.42	□□□□□ -2.34
ECM9	YKR004C	POG1	P40473	351 aa		0.42	□□□□□ -2.34
ECM9	YKR004C	MOB1	P40484	314 aa		0.42	□□□□□ -2.34
ECM9	YKR004C	SOL1	P50278	321 aa		0.42	□□□□□ -2.34
ECM9	YKR004C	CLG1	P35190	452 aa		0.41	□□□□□ -2.34
ECM9	YKR004C	SHG1	P38337	142 aa		0.41	□□□□□ -2.34
ECM9	YKR004C	SED1	Q01589	338 aa		0.41	□□□□□ -2.34
ECM9	YKR004C	SNO1	Q03144	224 aa		0.41	□□□□□ -2.34
ECM9	YKR004C	YPR127W	Q06494	345 aa		0.41	□□□□□ -2.34
ECM9	YKR004C	NVJ1	P38881	321 aa		0.4	□□□□□ -2.35

Retrieved 100 of 5,963 RNA–protein pairs in 42.2 ms