RNA–Protein interactions for RNA: YJL203W

PRP21, Transcript of Subunit of the SF3a splicing factor complex, yeastyeast

Gene PRP21, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP21YJL203W YOR015WQ12169 119 aa0.47□□□□□ -2.33
PRP21YJL203W TMA22P47089 198 aaPredicted RBP0.46□□□□□ -2.34
PRP21YJL203W IGO2Q9P305 131 aa0.46□□□□□ -2.34
PRP21YJL203W RPS24AP0CX31 135 aaKnown RBP0.45□□□□□ -2.34
PRP21YJL203W RPS24BP0CX32 135 aaKnown RBP0.45□□□□□ -2.34
PRP21YJL203W UPS1Q05776 175 aa0.45□□□□□ -2.34
PRP21YJL203W DAS2Q12084 232 aa0.45□□□□□ -2.34
PRP21YJL203W DUR1,2P32528 1835 aaKnown RBP0.45□□□□□ -2.34
PRP21YJL203W NTG1P31378 399 aa0.44□□□□□ -2.34
PRP21YJL203W NSE4P43124 402 aa0.44□□□□□ -2.34
PRP21YJL203W YHP1Q04116 353 aa0.44□□□□□ -2.34
PRP21YJL203W ELP6Q04868 273 aa0.44□□□□□ -2.34
PRP21YJL203W ATP20Q12233 115 aa0.44□□□□□ -2.34
PRP21YJL203W DGK1Q12382 290 aa0.44□□□□□ -2.34
PRP21YJL203W YLR422WQ06409 1932 aa0.44□□□□□ -2.34
PRP21YJL203W MATALPHA2P0CY08 210 aa0.43□□□□□ -2.34
PRP21YJL203W HMLALPHA2P0CY09 210 aa0.43□□□□□ -2.34
PRP21YJL203W NSA2P40078 261 aaKnown RBP0.43□□□□□ -2.34
PRP21YJL203W MRPS17Q03246 237 aaPredicted RBP0.43□□□□□ -2.34
PRP21YJL203W ARO80Q04052 950 aa0.43□□□□□ -2.34
PRP21YJL203W RNH1Q04740 348 aa0.43□□□□□ -2.34
PRP21YJL203W YMR030W-AQ3E760 96 aa0.43□□□□□ -2.34
PRP21YJL203W NSG1P38837 291 aa0.42□□□□□ -2.34
PRP21YJL203W YJR015WP47090 510 aa0.42□□□□□ -2.34
PRP21YJL203W SBH1P52870 82 aa0.42□□□□□ -2.34
PRP21YJL203W NRK1P53915 240 aa0.42□□□□□ -2.34
PRP21YJL203W YOR342CQ12182 319 aa0.42□□□□□ -2.34
PRP21YJL203W YLR412C-AQ3E742 68 aa0.42□□□□□ -2.34
PRP21YJL203W PRP8P33334 2413 aaKnown RBP0.41□□□□□ -2.34
PRP21YJL203W QCR7P00128 127 aa0.41□□□□□ -2.34
PRP21YJL203W RRT1P38192 103 aa0.41□□□□□ -2.34
PRP21YJL203W DML1Q03652 475 aa0.41□□□□□ -2.34
PRP21YJL203W YOL024WQ08172 172 aa0.4□□□□□ -2.35
PRP21YJL203W ATG41Q12048 136 aa0.4□□□□□ -2.35
PRP21YJL203W MAK31P23059 88 aa0.39□□□□□ -2.35
PRP21YJL203W ADE1P27616 306 aa0.39□□□□□ -2.35
PRP21YJL203W YKR070WP36151 352 aaKnown RBP0.39□□□□□ -2.35
PRP21YJL203W CCS1P40202 249 aaKnown RBP0.39□□□□□ -2.35
PRP21YJL203W RTC4P53850 401 aa0.39□□□□□ -2.35
PRP21YJL203W PGA1P53896 198 aa0.39□□□□□ -2.35
PRP21YJL203W YPR014CQ6B0W2 109 aa0.39□□□□□ -2.35
PRP21YJL203W RIF1P29539 1916 aa0.38□□□□□ -2.35
PRP21YJL203W HFA1P32874 2273 aa0.38□□□□□ -2.35
PRP21YJL203W RPB4P20433 221 aaPredicted RBP0.38□□□□□ -2.35
PRP21YJL203W HHT1P61830 136 aa0.38□□□□□ -2.35
PRP21YJL203W TMA23Q03525 211 aa0.38□□□□□ -2.35
PRP21YJL203W GAL83Q04739 417 aa0.38□□□□□ -2.35
PRP21YJL203W SED1Q01589 338 aa0.37□□□□□ -2.35
PRP21YJL203W GRX5Q02784 150 aa0.37□□□□□ -2.35
PRP21YJL203W YDC1Q02896 317 aa0.37□□□□□ -2.35
PRP21YJL203W KEI1Q06346 221 aa0.37□□□□□ -2.35
PRP21YJL203W SHB17P36136 271 aaKnown RBP0.36□□□□□ -2.35
PRP21YJL203W YDL085C-AQ3E7B7 68 aaKnown RBP0.36□□□□□ -2.35
PRP21YJL203W YOR381W-AQ3E804 55 aa0.36□□□□□ -2.35
PRP21YJL203W CDC39P25655 2108 aaKnown RBP0.35□□□□□ -2.35
PRP21YJL203W TAH1P25638 111 aaPredicted RBP0.35□□□□□ -2.35
PRP21YJL203W AIM34Q03673 198 aa0.35□□□□□ -2.35
PRP21YJL203W RIM9Q04734 239 aa0.35□□□□□ -2.35
PRP21YJL203W YOL013W-AP0C272 63 aaPredicted RBP0.34□□□□□ -2.36
PRP21YJL203W YCR001WP25347 104 aa0.34□□□□□ -2.36
PRP21YJL203W YGL230CP53074 147 aa0.34□□□□□ -2.36
PRP21YJL203W AVO2Q04749 426 aa0.34□□□□□ -2.36
PRP21YJL203W TRX3P25372 127 aa0.33□□□□□ -2.36
PRP21YJL203W HSP30P25619 332 aa0.33□□□□□ -2.36
PRP21YJL203W YKT6P36015 200 aaKnown RBP0.33□□□□□ -2.36
PRP21YJL203W YRA2P36036 203 aaKnown RBP RIP-Chip data0.33□□□□□ -2.36not detected
PRP21YJL203W TIM11P81449 96 aaPredicted RBP0.33□□□□□ -2.36
PRP21YJL203W NOC4Q06512 552 aaPredicted RBP0.33□□□□□ -2.36
PRP21YJL203W MPD1Q12404 318 aaKnown RBP0.33□□□□□ -2.36
PRP21YJL203W PRE1P22141 198 aaKnown RBP0.32□□□□□ -2.36
PRP21YJL203W FYV4P38783 130 aaPredicted RBP0.31□□□□□ -2.36
PRP21YJL203W VPS28Q02767 242 aa0.31□□□□□ -2.36
PRP21YJL203W FCY1Q12178 158 aa0.31□□□□□ -2.36
PRP21YJL203W LAA1P39526 2014 aa0.3□□□□□ -2.36
PRP21YJL203W GCY1P14065 312 aaKnown RBP RIP-Chip data0.3□□□□□ -2.36not detected
PRP21YJL203W AHC2P25649 128 aa0.3□□□□□ -2.36
PRP21YJL203W CPR5P35176 225 aa0.3□□□□□ -2.36
PRP21YJL203W HHY1P39982 102 aa0.3□□□□□ -2.36
PRP21YJL203W POG1P40473 351 aa0.3□□□□□ -2.36
PRP21YJL203W YHR213W-BQ8TGK1 99 aa0.3□□□□□ -2.36
PRP21YJL203W SEC14P24280 304 aaKnown RBP0.29□□□□□ -2.36
PRP21YJL203W CAF4P36130 643 aa0.29□□□□□ -2.36
PRP21YJL203W FMP32P43557 207 aa0.29□□□□□ -2.36
PRP21YJL203W YKR005CQ02203 525 aa0.29□□□□□ -2.36
PRP21YJL203W SHH4Q06236 168 aa0.29□□□□□ -2.36
PRP21YJL203W JIP3O13555 125 aa0.28□□□□□ -2.36
PRP21YJL203W YKL102CP34249 101 aa0.28□□□□□ -2.36
PRP21YJL203W CLG1P35190 452 aa0.28□□□□□ -2.36
PRP21YJL203W YNL200CP40165 246 aaKnown RBP0.28□□□□□ -2.36
PRP21YJL203W MOB1P40484 314 aa0.28□□□□□ -2.36
PRP21YJL203W GRX8Q05926 109 aa0.28□□□□□ -2.36
PRP21YJL203W YOR214CQ12282 236 aa0.28□□□□□ -2.36
PRP21YJL203W RFC2P40348 353 aa0.27□□□□□ -2.37
PRP21YJL203W GPI17Q04080 534 aa0.27□□□□□ -2.37
PRP21YJL203W BRX1Q08235 291 aaKnown RBP0.27□□□□□ -2.37
PRP21YJL203W PRM3Q08931 133 aa0.27□□□□□ -2.37
PRP21YJL203W YDL157CQ12082 118 aa0.27□□□□□ -2.37
PRP21YJL203W RAD9P14737 1309 aa0.27□□□□□ -2.37
PRP21YJL203W BLM10P43583 2143 aa0.26□□□□□ -2.37
PRP21YJL203W KIN28P06242 306 aa0.26□□□□□ -2.37
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms