RNA–Protein interactions for RNA: YGR181W

TIM13, Transcript of Mitochondrial intermembrane space protein, yeast

Gene TIM13, Length 318 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIM13	YGR181W	DCV1	P43595	202 aa		0.25	□□□□□ -2.37
TIM13	YGR181W	MMS2	P53152	137 aa		0.25	□□□□□ -2.37
TIM13	YGR181W	YNL184C	P53876	108 aa		0.25	□□□□□ -2.37
TIM13	YGR181W	ABP140	Q08641	628 aa	Known RBP	0.25	□□□□□ -2.37
TIM13	YGR181W	YBL010C	P32788	280 aa		0.24	□□□□□ -2.37
TIM13	YGR181W	ELP6	Q04868	273 aa		0.24	□□□□□ -2.37
TIM13	YGR181W	YOR015W	Q12169	119 aa		0.24	□□□□□ -2.37
TIM13	YGR181W	ATP20	Q12233	115 aa		0.24	□□□□□ -2.37
TIM13	YGR181W	RUD3	Q12234	484 aa	Known RBP	0.24	□□□□□ -2.37
TIM13	YGR181W	LAA1	P39526	2014 aa		0.24	□□□□□ -2.37
TIM13	YGR181W	MDN1	Q12019	4910 aa	Known RBP	0.24	□□□□□ -2.37
TIM13	YGR181W	CBF1	P17106	351 aa		0.23	□□□□□ -2.37
TIM13	YGR181W	PIR1	Q03178	341 aa		0.23	□□□□□ -2.37
TIM13	YGR181W	ARO80	Q04052	950 aa		0.23	□□□□□ -2.37
TIM13	YGR181W	YHP1	Q04116	353 aa		0.23	□□□□□ -2.37
TIM13	YGR181W	UPS1	Q05776	175 aa		0.23	□□□□□ -2.37
TIM13	YGR181W	DAS2	Q12084	232 aa		0.23	□□□□□ -2.37
TIM13	YGR181W	IGO2	Q9P305	131 aa		0.23	□□□□□ -2.37
TIM13	YGR181W	YPR117W	Q06116	2489 aa		0.22	□□□□□ -2.37
TIM13	YGR181W	NSE4	P43124	402 aa		0.22	□□□□□ -2.37
TIM13	YGR181W	SBH2	P52871	88 aa		0.22	□□□□□ -2.37
TIM13	YGR181W	YOR342C	Q12182	319 aa		0.22	□□□□□ -2.37
TIM13	YGR181W	BLM10	P43583	2143 aa		0.22	□□□□□ -2.37
TIM13	YGR181W	YBR056W-A	I2HB52	66 aa		0.21	□□□□□ -2.38
TIM13	YGR181W	QCR7	P00128	127 aa		0.21	□□□□□ -2.38
TIM13	YGR181W	RPS24A	P0CX31	135 aa	Known RBP	0.21	□□□□□ -2.38
TIM13	YGR181W	RPS24B	P0CX32	135 aa	Known RBP	0.21	□□□□□ -2.38
TIM13	YGR181W	MATALPHA2	P0CY08	210 aa		0.21	□□□□□ -2.38
TIM13	YGR181W	HMLALPHA2	P0CY09	210 aa		0.21	□□□□□ -2.38
TIM13	YGR181W	NTG1	P31378	399 aa		0.21	□□□□□ -2.38
TIM13	YGR181W	RRT1	P38192	103 aa		0.21	□□□□□ -2.38
TIM13	YGR181W	NSA2	P40078	261 aa	Known RBP	0.21	□□□□□ -2.38
TIM13	YGR181W	TMA22	P47089	198 aa	Predicted RBP	0.21	□□□□□ -2.38
TIM13	YGR181W	SBH1	P52870	82 aa		0.21	□□□□□ -2.38
TIM13	YGR181W	DML1	Q03652	475 aa		0.21	□□□□□ -2.38
TIM13	YGR181W	RNH1	Q04740	348 aa		0.21	□□□□□ -2.38
TIM13	YGR181W	DGK1	Q12382	290 aa		0.21	□□□□□ -2.38
TIM13	YGR181W	YMR030W-A	Q3E760	96 aa		0.21	□□□□□ -2.38
TIM13	YGR181W	URA2	P07259	2214 aa	Known RBP	0.2	□□□□□ -2.38
TIM13	YGR181W	MAK31	P23059	88 aa		0.2	□□□□□ -2.38
TIM13	YGR181W	NSG1	P38837	291 aa		0.2	□□□□□ -2.38
TIM13	YGR181W	CCS1	P40202	249 aa	Known RBP	0.2	□□□□□ -2.38
TIM13	YGR181W	YJR015W	P47090	510 aa		0.2	□□□□□ -2.38
TIM13	YGR181W	NRK1	P53915	240 aa		0.2	□□□□□ -2.38
TIM13	YGR181W	MRPS17	Q03246	237 aa	Predicted RBP	0.2	□□□□□ -2.38
TIM13	YGR181W	ATG41	Q12048	136 aa		0.2	□□□□□ -2.38
TIM13	YGR181W	YLR412C-A	Q3E742	68 aa		0.2	□□□□□ -2.38
TIM13	YGR181W	ADE1	P27616	306 aa		0.19	□□□□□ -2.38
TIM13	YGR181W	SHB17	P36136	271 aa	Known RBP	0.19	□□□□□ -2.38
TIM13	YGR181W	YKR070W	P36151	352 aa	Known RBP	0.19	□□□□□ -2.38
TIM13	YGR181W	PGA1	P53896	198 aa		0.19	□□□□□ -2.38
TIM13	YGR181W	SED1	Q01589	338 aa		0.19	□□□□□ -2.38
TIM13	YGR181W	YDC1	Q02896	317 aa		0.19	□□□□□ -2.38
TIM13	YGR181W	GAL83	Q04739	417 aa		0.19	□□□□□ -2.38
TIM13	YGR181W	KEI1	Q06346	221 aa		0.19	□□□□□ -2.38
TIM13	YGR181W	YOL024W	Q08172	172 aa		0.19	□□□□□ -2.38
TIM13	YGR181W	TMA23	Q03525	211 aa		0.18	□□□□□ -2.38
TIM13	YGR181W	AVO2	Q04749	426 aa		0.18	□□□□□ -2.38
TIM13	YGR181W	YOR381W-A	Q3E804	55 aa		0.18	□□□□□ -2.38
TIM13	YGR181W	YOL013W-A	P0C272	63 aa	Predicted RBP	0.17	□□□□□ -2.38
TIM13	YGR181W	YCR001W	P25347	104 aa		0.17	□□□□□ -2.38
TIM13	YGR181W	TOR2	P32600	2474 aa	Known RBP	0.17	□□□□□ -2.38
TIM13	YGR181W	RIM9	Q04734	239 aa		0.17	□□□□□ -2.38
TIM13	YGR181W	YPR014C	Q6B0W2	109 aa		0.17	□□□□□ -2.38
TIM13	YGR181W	RPB4	P20433	221 aa	Predicted RBP	0.16	□□□□□ -2.38
TIM13	YGR181W	TAH1	P25638	111 aa	Predicted RBP	0.16	□□□□□ -2.38
TIM13	YGR181W	CPR5	P35176	225 aa		0.16	□□□□□ -2.38
TIM13	YGR181W	YGL230C	P53074	147 aa		0.16	□□□□□ -2.38
TIM13	YGR181W	RTC4	P53850	401 aa		0.16	□□□□□ -2.38
TIM13	YGR181W	HHT1	P61830	136 aa		0.16	□□□□□ -2.38
TIM13	YGR181W	AIM34	Q03673	198 aa		0.16	□□□□□ -2.38
TIM13	YGR181W	MPD1	Q12404	318 aa	Known RBP	0.16	□□□□□ -2.38
TIM13	YGR181W	TRX3	P25372	127 aa		0.15	□□□□□ -2.39
TIM13	YGR181W	HSP30	P25619	332 aa		0.15	□□□□□ -2.39
TIM13	YGR181W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	0.15	□□□□□ -2.39	not detected
TIM13	YGR181W	FYV4	P38783	130 aa	Predicted RBP	0.15	□□□□□ -2.39
TIM13	YGR181W	HHY1	P39982	102 aa		0.15	□□□□□ -2.39
TIM13	YGR181W	TIM11	P81449	96 aa	Predicted RBP	0.15	□□□□□ -2.39
TIM13	YGR181W	NOC4	Q06512	552 aa	Predicted RBP	0.15	□□□□□ -2.39
TIM13	YGR181W	YDL085C-A	Q3E7B7	68 aa	Known RBP	0.15	□□□□□ -2.39
TIM13	YGR181W	AHC2	P25649	128 aa		0.14	□□□□□ -2.39
TIM13	YGR181W	YKT6	P36015	200 aa	Known RBP	0.14	□□□□□ -2.39
TIM13	YGR181W	YNL200C	P40165	246 aa	Known RBP	0.14	□□□□□ -2.39
TIM13	YGR181W	POG1	P40473	351 aa		0.14	□□□□□ -2.39
TIM13	YGR181W	GRX5	Q02784	150 aa		0.14	□□□□□ -2.39
TIM13	YGR181W	FCY1	Q12178	158 aa		0.14	□□□□□ -2.39
TIM13	YGR181W	TOR1	P35169	2470 aa		0.14	□□□□□ -2.39
TIM13	YGR181W	JIP3	O13555	125 aa		0.13	□□□□□ -2.39
TIM13	YGR181W	PRE1	P22141	198 aa	Known RBP	0.13	□□□□□ -2.39
TIM13	YGR181W	SEC14	P24280	304 aa	Known RBP	0.13	□□□□□ -2.39
TIM13	YGR181W	YKL102C	P34249	101 aa		0.13	□□□□□ -2.39
TIM13	YGR181W	VPS28	Q02767	242 aa		0.13	□□□□□ -2.39
TIM13	YGR181W	YHR213W-B	Q8TGK1	99 aa		0.13	□□□□□ -2.39
TIM13	YGR181W	CLG1	P35190	452 aa		0.12	□□□□□ -2.39
TIM13	YGR181W	FMP32	P43557	207 aa		0.12	□□□□□ -2.39
TIM13	YGR181W	YKR005C	Q02203	525 aa		0.12	□□□□□ -2.39
TIM13	YGR181W	GRX8	Q05926	109 aa		0.12	□□□□□ -2.39
TIM13	YGR181W	SHH4	Q06236	168 aa		0.12	□□□□□ -2.39
TIM13	YGR181W	BRX1	Q08235	291 aa	Known RBP	0.12	□□□□□ -2.39
TIM13	YGR181W	PRM3	Q08931	133 aa		0.12	□□□□□ -2.39

Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms