RNA–Protein interactions for RNA: YGR074W

SMD1, Transcript of Core Sm protein Sm D1, yeastyeast

Gene SMD1, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD1YGR074W YPL073CP40323 161 aa1.2□□□□□ -2.22
SMD1YGR074W DIG2Q03373 323 aaKnown RBP1.2□□□□□ -2.22
SMD1YGR074W CSI2Q08054 341 aa1.2□□□□□ -2.22
SMD1YGR074W YLR053CQ12026 108 aa1.2□□□□□ -2.22
SMD1YGR074W YPR013CQ12145 317 aa1.2□□□□□ -2.22
SMD1YGR074W RPS28AQ3E7X9 67 aaPredicted RBP1.2□□□□□ -2.22
SMD1YGR074W IDP1P21954 428 aaKnown RBP1.19□□□□□ -2.22
SMD1YGR074W HSP30P25619 332 aa1.19□□□□□ -2.22
SMD1YGR074W GSP2P32836 220 aaKnown RBP1.19□□□□□ -2.22
SMD1YGR074W YER121WP40076 114 aa1.19□□□□□ -2.22
SMD1YGR074W RIO2P40160 425 aaKnown RBP1.19□□□□□ -2.22
SMD1YGR074W RPL13BP40212 199 aaKnown RBP1.19□□□□□ -2.22
SMD1YGR074W GLR1P41921 483 aaKnown RBP1.19□□□□□ -2.22
SMD1YGR074W YFH7P43591 353 aa1.19□□□□□ -2.22
SMD1YGR074W YGL235WP53071 178 aa1.19□□□□□ -2.22
SMD1YGR074W PIR1Q03178 341 aa1.19□□□□□ -2.22
SMD1YGR074W NAT3Q06504 195 aa1.19□□□□□ -2.22
SMD1YGR074W PRP11Q07350 266 aaPredicted RBP1.19□□□□□ -2.22
SMD1YGR074W YOR214CQ12282 236 aa1.19□□□□□ -2.22
SMD1YGR074W RPL13AQ12690 199 aaPredicted RBP1.19□□□□□ -2.22
SMD1YGR074W RAD6P06104 172 aa1.18□□□□□ -2.22
SMD1YGR074W YGL010WP25338 174 aa1.18□□□□□ -2.22
SMD1YGR074W RME1P32338 300 aaKnown RBP1.18□□□□□ -2.22
SMD1YGR074W ARC19P33204 171 aaKnown RBP1.18□□□□□ -2.22
SMD1YGR074W UBC6P33296 250 aaPredicted RBP1.18□□□□□ -2.22
SMD1YGR074W NUF2P33895 451 aa1.18□□□□□ -2.22
SMD1YGR074W YER135CP40082 130 aa1.18□□□□□ -2.22
SMD1YGR074W TTI2P47168 421 aa1.18□□□□□ -2.22
SMD1YGR074W YNL033WP53964 284 aa1.18□□□□□ -2.22
SMD1YGR074W YKR005CQ02203 525 aa1.18□□□□□ -2.22
SMD1YGR074W RCE1Q03530 315 aa1.18□□□□□ -2.22
SMD1YGR074W YLR162WQ06235 118 aa1.18□□□□□ -2.22
SMD1YGR074W YPR127WQ06494 345 aa1.18□□□□□ -2.22
SMD1YGR074W BEM2P39960 2167 aaKnown RBP1.17□□□□□ -2.22
SMD1YGR074W TRM3Q07527 1436 aa1.17□□□□□ -2.22
SMD1YGR074W MDM35O60200 86 aa1.17□□□□□ -2.22
SMD1YGR074W FPR1P20081 114 aaKnown RBP1.17□□□□□ -2.22
SMD1YGR074W EFM5P53200 248 aaKnown RBP1.17□□□□□ -2.22
SMD1YGR074W GAL83Q04739 417 aa1.17□□□□□ -2.22
SMD1YGR074W HRD1Q08109 551 aa1.17□□□□□ -2.22
SMD1YGR074W DAS2Q12084 232 aa1.17□□□□□ -2.22
SMD1YGR074W YOR015WQ12169 119 aa1.17□□□□□ -2.22
SMD1YGR074W RDI1Q12434 202 aa1.17□□□□□ -2.22
SMD1YGR074W PBI2P0CT04 75 aaKnown RBP1.16□□□□□ -2.22
SMD1YGR074W BUB2P26448 306 aaPredicted RBP1.16□□□□□ -2.22
SMD1YGR074W YBR220CP38318 560 aa1.16□□□□□ -2.22
SMD1YGR074W VMA22P38784 181 aa1.16□□□□□ -2.22
SMD1YGR074W SBH2P52871 88 aa1.16□□□□□ -2.22
SMD1YGR074W DAD4P69851 72 aa1.16□□□□□ -2.22
SMD1YGR074W FYV12Q08559 129 aa1.16□□□□□ -2.22
SMD1YGR074W ATP20Q12233 115 aa1.16□□□□□ -2.22
SMD1YGR074W RIF1P29539 1916 aa1.15□□□□□ -2.22
SMD1YGR074W COX8P04039 78 aa1.15□□□□□ -2.23
SMD1YGR074W YCR023CP25351 611 aa1.15□□□□□ -2.23
SMD1YGR074W RRT1P38192 103 aa1.15□□□□□ -2.23
SMD1YGR074W FIG1P38224 298 aa1.15□□□□□ -2.23
SMD1YGR074W YGL101WP53144 215 aa1.15□□□□□ -2.23
SMD1YGR074W HSK3P69852 69 aa1.15□□□□□ -2.23
SMD1YGR074W MZM1Q03429 123 aaPredicted RBP1.15□□□□□ -2.23
SMD1YGR074W UPS3Q04006 179 aa1.15□□□□□ -2.23
SMD1YGR074W THI74Q04083 370 aa1.15□□□□□ -2.23
SMD1YGR074W YDR391CQ04170 232 aa1.15□□□□□ -2.23
SMD1YGR074W YNL146C-AQ3E7Z1 64 aa1.15□□□□□ -2.23
SMD1YGR074W MSB2P32334 1306 aa1.15□□□□□ -2.23
SMD1YGR074W PEX34P25584 144 aa1.14□□□□□ -2.23
SMD1YGR074W DER1P38307 211 aa1.14□□□□□ -2.23
SMD1YGR074W YHL018WP38744 120 aaPredicted RBP1.14□□□□□ -2.23
SMD1YGR074W EDC3P39998 551 aaKnown RBP1.14□□□□□ -2.23
SMD1YGR074W ALB1P47019 175 aaPredicted RBP1.14□□□□□ -2.23
SMD1YGR074W HHT1P61830 136 aa1.14□□□□□ -2.23
SMD1YGR074W MET31Q03081 177 aa1.14□□□□□ -2.23
SMD1YGR074W YLR046CQ12253 270 aa1.14□□□□□ -2.23
SMD1YGR074W DUR1,2P32528 1835 aaKnown RBP1.14□□□□□ -2.23
SMD1YGR074W QCR6P00127 147 aa1.13□□□□□ -2.23
SMD1YGR074W RPL2AP0CX45 254 aaKnown RBP1.13□□□□□ -2.23
SMD1YGR074W RPL2BP0CX46 254 aaKnown RBP1.13□□□□□ -2.23
SMD1YGR074W PHO85P17157 305 aa1.13□□□□□ -2.23
SMD1YGR074W PTC1P35182 281 aa1.13□□□□□ -2.23
SMD1YGR074W UPS2P35200 230 aa1.13□□□□□ -2.23
SMD1YGR074W SRP102P36057 244 aaPredicted RBP1.13□□□□□ -2.23
SMD1YGR074W SOK1P40317 901 aa1.13□□□□□ -2.23
SMD1YGR074W DLS1P40366 167 aa1.13□□□□□ -2.23
SMD1YGR074W FLX1P40464 311 aa1.13□□□□□ -2.23
SMD1YGR074W HYR1P40581 163 aaKnown RBP1.13□□□□□ -2.23
SMD1YGR074W SOL1P50278 321 aa1.13□□□□□ -2.23
SMD1YGR074W THG1P53215 237 aaKnown RBP1.13□□□□□ -2.23
SMD1YGR074W LSM3P57743 89 aaKnown RBP1.13□□□□□ -2.23
SMD1YGR074W CWC27Q02770 301 aa1.13□□□□□ -2.23
SMD1YGR074W RRP17Q04031 235 aaPredicted RBP1.13□□□□□ -2.23
SMD1YGR074W RNH202Q05635 350 aa1.13□□□□□ -2.23
SMD1YGR074W SMD2Q06217 110 aaKnown RBP1.13□□□□□ -2.23
SMD1YGR074W ATG41Q12048 136 aa1.13□□□□□ -2.23
SMD1YGR074W NSL1Q12143 216 aa1.13□□□□□ -2.23
SMD1YGR074W STF2P16965 84 aa1.12□□□□□ -2.23
SMD1YGR074W RPB7P34087 171 aa1.12□□□□□ -2.23
SMD1YGR074W YRA2P36036 203 aaKnown RBP RIP-Chip data1.12□□□□□ -2.23not detected
SMD1YGR074W FYV4P38783 130 aaPredicted RBP1.12□□□□□ -2.23
SMD1YGR074W HPA3P39979 161 aa1.12□□□□□ -2.23
SMD1YGR074W MOB1P40484 314 aa1.12□□□□□ -2.23
SMD1YGR074W LIP1Q03579 150 aa1.12□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 27 ms