RNA–Protein interactions for RNA: YGL248W

PDE1, Transcript of Low-affinity cyclic AMP phosphodiesterase, yeastyeast

Gene PDE1, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDE1YGL248W RPB3P16370 318 aaKnown RBP4.3□□□□□ -1.72
PDE1YGL248W BET1P22804 142 aa4.3□□□□□ -1.72
PDE1YGL248W HSP12P22943 109 aaKnown RBP4.3□□□□□ -1.72
PDE1YGL248W ERV15P38312 142 aa4.3□□□□□ -1.72
PDE1YGL248W YNL208WP40159 199 aaKnown RBP4.3□□□□□ -1.72
PDE1YGL248W YJL218WP40892 196 aaKnown RBP4.3□□□□□ -1.72
PDE1YGL248W PFS2P42841 465 aaKnown RBP4.3□□□□□ -1.72
PDE1YGL248W EMC4P53073 190 aa4.3□□□□□ -1.72
PDE1YGL248W YCL001W-AP87012 153 aa4.3□□□□□ -1.72
PDE1YGL248W HIR3P47171 1648 aa4.29□□□□□ -1.72
PDE1YGL248W ADH3P07246 375 aaKnown RBP4.29□□□□□ -1.72
PDE1YGL248W BGL2P15703 313 aaKnown RBP4.29□□□□□ -1.72
PDE1YGL248W URE2P23202 354 aaKnown RBP4.29□□□□□ -1.72
PDE1YGL248W SDH4P37298 181 aa4.29□□□□□ -1.72
PDE1YGL248W SFT2P38166 215 aa4.29□□□□□ -1.72
PDE1YGL248W YHR130CP38834 111 aa4.29□□□□□ -1.72
PDE1YGL248W PHS1P40857 217 aa4.29□□□□□ -1.72
PDE1YGL248W YGR164WP53291 111 aa4.29□□□□□ -1.72
PDE1YGL248W SPG3Q04398 127 aaPredicted RBP4.29□□□□□ -1.72
PDE1YGL248W YOL014WQ08110 124 aa4.29□□□□□ -1.72
PDE1YGL248W NIP7Q08962 181 aaKnown RBP4.29□□□□□ -1.72
PDE1YGL248W YML100W-AQ8TGT0 57 aa4.29□□□□□ -1.72
PDE1YGL248W CCH1P50077 2039 aa4.29□□□□□ -1.72
PDE1YGL248W RAD6P06104 172 aa4.28□□□□□ -1.72
PDE1YGL248W SGA1P08019 549 aa4.28□□□□□ -1.72
PDE1YGL248W YPR170W-BP0C5R9 85 aa4.28□□□□□ -1.72
PDE1YGL248W YFL068WP0CX99 160 aa4.28□□□□□ -1.72
PDE1YGL248W YLL066W-AP0CY00 160 aa4.28□□□□□ -1.72
PDE1YGL248W YLL067W-AP0CY01 160 aa4.28□□□□□ -1.72
PDE1YGL248W URA5P13298 226 aaKnown RBP4.28□□□□□ -1.72
PDE1YGL248W CPR1P14832 162 aaKnown RBP4.28□□□□□ -1.72
PDE1YGL248W RCN1P36054 211 aa4.28□□□□□ -1.72
PDE1YGL248W OM14P38325 134 aa4.28□□□□□ -1.72
PDE1YGL248W HTD2P38790 280 aaKnown RBP4.28□□□□□ -1.72
PDE1YGL248W GAA1P39012 614 aa4.28□□□□□ -1.72
PDE1YGL248W SPC25P40014 221 aa4.28□□□□□ -1.72
PDE1YGL248W AVT6P40074 448 aa4.28□□□□□ -1.72
PDE1YGL248W SYS1P41544 203 aa4.28□□□□□ -1.72
PDE1YGL248W GEP7P53171 287 aa4.28□□□□□ -1.72
PDE1YGL248W WSC2P53832 503 aa4.28□□□□□ -1.72
PDE1YGL248W OSH6Q02201 448 aa4.28□□□□□ -1.72
PDE1YGL248W SLD7Q08457 257 aa4.28□□□□□ -1.72
PDE1YGL248W UIP4Q08926 304 aa4.28□□□□□ -1.72
PDE1YGL248W YPL264CQ08980 353 aa4.28□□□□□ -1.72
PDE1YGL248W YNL162W-AQ3E7A8 72 aa4.28□□□□□ -1.72
PDE1YGL248W EAF6P47128 113 aa4.27□□□□□ -1.73
PDE1YGL248W YDR415CQ04033 374 aaPredicted RBP4.27□□□□□ -1.73
PDE1YGL248W KEI1Q06346 221 aa4.27□□□□□ -1.73
PDE1YGL248W YOR097CQ12274 175 aaPredicted RBP4.27□□□□□ -1.73
PDE1YGL248W ATR1P13090 542 aa4.26□□□□□ -1.73
PDE1YGL248W RPB5P20434 215 aa4.26□□□□□ -1.73
PDE1YGL248W MRS4P23500 304 aa4.26□□□□□ -1.73
PDE1YGL248W ARO2P28777 376 aaKnown RBP4.26□□□□□ -1.73
PDE1YGL248W VMA11P32842 164 aa4.26□□□□□ -1.73
PDE1YGL248W ZRT3P34240 503 aa4.26□□□□□ -1.73
PDE1YGL248W YER188WP40103 239 aa4.26□□□□□ -1.73
PDE1YGL248W YNL200CP40165 246 aaKnown RBP4.26□□□□□ -1.73
PDE1YGL248W BAT2P47176 376 aaKnown RBP4.26□□□□□ -1.73
PDE1YGL248W EST3Q03096 181 aa4.26□□□□□ -1.73
PDE1YGL248W YMR103CQ04436 120 aa4.26□□□□□ -1.73
PDE1YGL248W SSK2P53599 1579 aa4.26□□□□□ -1.73
PDE1YGL248W UFD4P33202 1483 aa4.25□□□□□ -1.73
PDE1YGL248W GEA2P39993 1459 aaKnown RBP4.25□□□□□ -1.73
PDE1YGL248W RAD10P06838 210 aa4.25□□□□□ -1.73
PDE1YGL248W MPM1P40364 252 aa4.25□□□□□ -1.73
PDE1YGL248W GAT4P40569 121 aa4.25□□□□□ -1.73
PDE1YGL248W YFL019CP43576 117 aa4.25□□□□□ -1.73
PDE1YGL248W NCA3P46955 337 aa4.25□□□□□ -1.73
PDE1YGL248W YJL028WP47062 111 aa4.25□□□□□ -1.73
PDE1YGL248W DOC1P53068 250 aa4.25□□□□□ -1.73
PDE1YGL248W EMI1Q04406 187 aa4.25□□□□□ -1.73
PDE1YGL248W TIM22Q12328 207 aa4.25□□□□□ -1.73
PDE1YGL248W YAL063C-AQ3E791 96 aa4.25□□□□□ -1.73
PDE1YGL248W DDP1Q99321 188 aaKnown RBP4.25□□□□□ -1.73
PDE1YGL248W LTE1P07866 1435 aa4.24□□□□□ -1.73
PDE1YGL248W YLR156WP0CE96 114 aa4.24□□□□□ -1.73
PDE1YGL248W YLR159WP0CE97 114 aa4.24□□□□□ -1.73
PDE1YGL248W YLR161WP0CE98 114 aa4.24□□□□□ -1.73
PDE1YGL248W HAP3P13434 144 aa4.24□□□□□ -1.73
PDE1YGL248W MRPL44P19956 98 aa4.24□□□□□ -1.73
PDE1YGL248W COX10P21592 462 aa4.24□□□□□ -1.73
PDE1YGL248W TOM40P23644 387 aaKnown RBP4.24□□□□□ -1.73
PDE1YGL248W MSA2P36157 363 aa4.24□□□□□ -1.73
PDE1YGL248W SHE1P38200 338 aa4.24□□□□□ -1.73
PDE1YGL248W TEM1P38987 245 aa4.24□□□□□ -1.73
PDE1YGL248W YAR029WP39549 74 aa4.24□□□□□ -1.73
PDE1YGL248W YER134CP40081 178 aa4.24□□□□□ -1.73
PDE1YGL248W YIL059CP40520 121 aa4.24□□□□□ -1.73
PDE1YGL248W PAM16P42949 149 aa4.24□□□□□ -1.73
PDE1YGL248W YFR045WP43617 309 aa4.24□□□□□ -1.73
PDE1YGL248W SPG1P50088 95 aa4.24□□□□□ -1.73
PDE1YGL248W RCE1Q03530 315 aa4.24□□□□□ -1.73
PDE1YGL248W ATG10Q07879 167 aa4.24□□□□□ -1.73
PDE1YGL248W YPR063CQ12160 140 aa4.24□□□□□ -1.73
PDE1YGL248W ISD11Q6Q560 94 aa4.24□□□□□ -1.73
PDE1YGL248W NAG1Q8TGN9 163 aa4.24□□□□□ -1.73
PDE1YGL248W TRP1P00912 224 aa4.23□□□□□ -1.73
PDE1YGL248W YAR068WP39564 161 aa4.23□□□□□ -1.73
PDE1YGL248W RPL13BP40212 199 aaKnown RBP4.23□□□□□ -1.73
PDE1YGL248W DIM1P41819 318 aaKnown RBP4.23□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms