RNA–Protein interactions for RNA: YDR401W

YDR401W, Transcript of Dubious open reading frame, yeast

Gene YDR401W, Length 564 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR401W	YDR401W	PTC1	P35182	281 aa		4.28	□□□□□ -1.72
YDR401W	YDR401W	VPS28	Q02767	242 aa		4.28	□□□□□ -1.72
YDR401W	YDR401W	YMR295C	Q03559	197 aa		4.28	□□□□□ -1.72
YDR401W	YDR401W	SCW10	Q04951	389 aa		4.28	□□□□□ -1.72
YDR401W	YDR401W	NEJ1	Q06148	342 aa		4.28	□□□□□ -1.72
YDR401W	YDR401W	RPO41	P13433	1351 aa	Known RBP	4.27	□□□□□ -1.73
YDR401W	YDR401W	SCL1	P21243	252 aa	Known RBP	4.27	□□□□□ -1.73
YDR401W	YDR401W	SPT14	P32363	452 aa		4.27	□□□□□ -1.73
YDR401W	YDR401W	YBR220C	P38318	560 aa		4.27	□□□□□ -1.73
YDR401W	YDR401W	NSA2	P40078	261 aa	Known RBP	4.27	□□□□□ -1.73
YDR401W	YDR401W	GLC8	P41818	229 aa		4.27	□□□□□ -1.73
YDR401W	YDR401W	YGR219W	P53307	113 aa		4.27	□□□□□ -1.73
YDR401W	YDR401W	MPC3	P53311	146 aa		4.27	□□□□□ -1.73
YDR401W	YDR401W	YDR366C	P87287	132 aa		4.27	□□□□□ -1.73
YDR401W	YDR401W	FEX1	Q08913	375 aa		4.27	□□□□□ -1.73
YDR401W	YDR401W	FEX2	Q08991	375 aa		4.27	□□□□□ -1.73
YDR401W	YDR401W	YER181C	P40097	107 aa		4.26	□□□□□ -1.73
YDR401W	YDR401W	CUP9	P41817	306 aa		4.26	□□□□□ -1.73
YDR401W	YDR401W	YKR005C	Q02203	525 aa		4.26	□□□□□ -1.73
YDR401W	YDR401W	SLO1	Q3E784	85 aa		4.26	□□□□□ -1.73
YDR401W	YDR401W	SPC25	P40014	221 aa		4.25	□□□□□ -1.73
YDR401W	YDR401W	YJL218W	P40892	196 aa	Known RBP	4.25	□□□□□ -1.73
YDR401W	YDR401W	DUR1,2	P32528	1835 aa	Known RBP	4.25	□□□□□ -1.73
YDR401W	YDR401W	TRM3	Q07527	1436 aa		4.24	□□□□□ -1.73
YDR401W	YDR401W	RSA4	P25382	515 aa	Known RBP	4.24	□□□□□ -1.73
YDR401W	YDR401W	SCM4	P32564	187 aa		4.24	□□□□□ -1.73
YDR401W	YDR401W	RPS20	P38701	121 aa	Known RBP	4.24	□□□□□ -1.73
YDR401W	YDR401W	HTD2	P38790	280 aa	Known RBP	4.24	□□□□□ -1.73
YDR401W	YDR401W	DOC1	P53068	250 aa		4.24	□□□□□ -1.73
YDR401W	YDR401W	YNR077C	P53758	84 aa		4.24	□□□□□ -1.73
YDR401W	YDR401W	YMR253C	Q04835	414 aa		4.24	□□□□□ -1.73
YDR401W	YDR401W	ATP20	Q12233	115 aa		4.24	□□□□□ -1.73
YDR401W	YDR401W	RAD6	P06104	172 aa		4.23	□□□□□ -1.73
YDR401W	YDR401W	KRE1	P17260	313 aa		4.23	□□□□□ -1.73
YDR401W	YDR401W	YET1	P35723	206 aa		4.23	□□□□□ -1.73
YDR401W	YDR401W	PAM17	P36147	197 aa		4.23	□□□□□ -1.73
YDR401W	YDR401W	TVP23	P38962	199 aa		4.23	□□□□□ -1.73
YDR401W	YDR401W	YEL028W	P39989	153 aa		4.23	□□□□□ -1.73
YDR401W	YDR401W	GPI2	P46961	280 aa		4.23	□□□□□ -1.73
YDR401W	YDR401W	YGR039W	P53225	103 aa		4.23	□□□□□ -1.73
YDR401W	YDR401W	YDR391C	Q04170	232 aa		4.23	□□□□□ -1.73
YDR401W	YDR401W	HSP30	P25619	332 aa		4.22	□□□□□ -1.73
YDR401W	YDR401W	SRP21	P32342	167 aa		4.22	□□□□□ -1.73
YDR401W	YDR401W	RPL33B	P41056	107 aa	Known RBP	4.22	□□□□□ -1.73
YDR401W	YDR401W	CGI121	Q03705	181 aa	Known RBP	4.22	□□□□□ -1.73
YDR401W	YDR401W	SHH3	Q04487	196 aa		4.22	□□□□□ -1.73
YDR401W	YDR401W	YPD1	Q07688	167 aa		4.22	□□□□□ -1.73
YDR401W	YDR401W	FSF1	Q12029	327 aa	Known RBP	4.22	□□□□□ -1.73
YDR401W	YDR401W	SPC3	Q12133	184 aa		4.22	□□□□□ -1.73
YDR401W	YDR401W	FCY1	Q12178	158 aa		4.22	□□□□□ -1.73
YDR401W	YDR401W	Q0144	Q9ZZW2	109 aa		4.22	□□□□□ -1.73
YDR401W	YDR401W	FZF1	P32805	299 aa		4.21	□□□□□ -1.74
YDR401W	YDR401W	CIS3	P47001	227 aa		4.21	□□□□□ -1.74
YDR401W	YDR401W	YJL027C	P47063	138 aa	Predicted RBP	4.21	□□□□□ -1.74
YDR401W	YDR401W	SYM1	Q06563	197 aa		4.21	□□□□□ -1.74
YDR401W	YDR401W	RDS3	Q06835	107 aa	Predicted RBP	4.21	□□□□□ -1.74
YDR401W	YDR401W	WIP1	Q2V2P8	89 aa		4.21	□□□□□ -1.74
YDR401W	YDR401W	SOD1	P00445	154 aa	Known RBP	4.2	□□□□□ -1.74
YDR401W	YDR401W	PHO13	P19881	312 aa		4.2	□□□□□ -1.74
YDR401W	YDR401W	RPC19	P28000	142 aa	Known RBP	4.2	□□□□□ -1.74
YDR401W	YDR401W	YER135C	P40082	130 aa		4.2	□□□□□ -1.74
YDR401W	YDR401W	SDH7	Q04401	133 aa		4.2	□□□□□ -1.74
YDR401W	YDR401W	FRQ1	Q06389	190 aa		4.2	□□□□□ -1.74
YDR401W	YDR401W	ATP14	Q12349	124 aa		4.2	□□□□□ -1.74
YDR401W	YDR401W	AGA2	P32781	87 aa		4.19	□□□□□ -1.74
YDR401W	YDR401W	RPS1A	P33442	255 aa	Known RBP	4.19	□□□□□ -1.74
YDR401W	YDR401W	MRPL24	P36525	258 aa	Predicted RBP	4.19	□□□□□ -1.74
YDR401W	YDR401W	YNR062C	P53748	327 aa		4.19	□□□□□ -1.74
YDR401W	YDR401W	RPL26A	P05743	127 aa	Known RBP	4.18	□□□□□ -1.74
YDR401W	YDR401W	RRT1	P38192	103 aa		4.18	□□□□□ -1.74
YDR401W	YDR401W	YHR140W	P38842	239 aa		4.18	□□□□□ -1.74
YDR401W	YDR401W	RIO2	P40160	425 aa	Known RBP	4.18	□□□□□ -1.74
YDR401W	YDR401W	YJR146W	P47174	117 aa		4.18	□□□□□ -1.74
YDR401W	YDR401W	RPL26B	P53221	127 aa	Known RBP	4.18	□□□□□ -1.74
YDR401W	YDR401W	SLM2	P53955	656 aa		4.18	□□□□□ -1.74
YDR401W	YDR401W	CNL1	Q06333	122 aa		4.18	□□□□□ -1.74
YDR401W	YDR401W	IRC23	Q08416	157 aa		4.18	□□□□□ -1.74
YDR401W	YDR401W	APS3	P47064	194 aa		4.17	□□□□□ -1.74
YDR401W	YDR401W	SUI1	P32911	108 aa	Known RBP	4.16	□□□□□ -1.74
YDR401W	YDR401W	TRS20	P38334	175 aa		4.16	□□□□□ -1.74
YDR401W	YDR401W	TIR3	P40552	269 aa		4.16	□□□□□ -1.74
YDR401W	YDR401W	YNL033W	P53964	284 aa		4.16	□□□□□ -1.74
YDR401W	YDR401W	EST3	Q03096	181 aa		4.16	□□□□□ -1.74
YDR401W	YDR401W	YPR195C	Q06594	109 aa		4.16	□□□□□ -1.74
YDR401W	YDR401W	BOL2	P53082	120 aa		4.15	□□□□□ -1.75
YDR401W	YDR401W	PRP11	Q07350	266 aa	Predicted RBP	4.15	□□□□□ -1.75
YDR401W	YDR401W	YNL277W-A	Q3E7Z0	62 aa		4.15	□□□□□ -1.75
YDR401W	YDR401W	ATG40	Q99325	256 aa		4.15	□□□□□ -1.75
YDR401W	YDR401W	FMP49	A0A023PZB3	126 aa		4.14	□□□□□ -1.75
YDR401W	YDR401W	ERV15	P38312	142 aa		4.14	□□□□□ -1.75
YDR401W	YDR401W	RIM9	Q04734	239 aa		4.14	□□□□□ -1.75
YDR401W	YDR401W	NKP2	Q06162	153 aa		4.14	□□□□□ -1.75
YDR401W	YDR401W	MIG1	P27705	504 aa		4.13	□□□□□ -1.75
YDR401W	YDR401W	AHT1	P29589	182 aa		4.13	□□□□□ -1.75
YDR401W	YDR401W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
YDR401W	YDR401W	YNR064C	P53750	290 aa		4.13	□□□□□ -1.75
YDR401W	YDR401W	BUD25	P85052	153 aa		4.13	□□□□□ -1.75
YDR401W	YDR401W	LIP1	Q03579	150 aa		4.13	□□□□□ -1.75
YDR401W	YDR401W	YDR102C	Q03864	110 aa		4.13	□□□□□ -1.75
YDR401W	YDR401W	BOL1	Q3E793	110 aa		4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 36.4 ms