RNA–Protein interactions for RNA: YDR261W-A

YDR261W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YDR261W-A, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR261W-AYDR261W-A TIR1P10863 254 aa0.84□□□□□ -2.28
YDR261W-AYDR261W-A ACP1P32463 125 aa0.84□□□□□ -2.28
YDR261W-AYDR261W-A CLG1P35190 452 aa0.84□□□□□ -2.28
YDR261W-AYDR261W-A SEC72P39742 193 aaKnown RBP0.84□□□□□ -2.28
YDR261W-AYDR261W-A TMA22P47089 198 aaPredicted RBP0.84□□□□□ -2.28
YDR261W-AYDR261W-A MMS2P53152 137 aa0.84□□□□□ -2.28
YDR261W-AYDR261W-A YIP3P53633 176 aa0.84□□□□□ -2.28
YDR261W-AYDR261W-A YNL184CP53876 108 aa0.84□□□□□ -2.28
YDR261W-AYDR261W-A YDR391CQ04170 232 aa0.84□□□□□ -2.28
YDR261W-AYDR261W-A YMR253CQ04835 414 aa0.84□□□□□ -2.28
YDR261W-AYDR261W-A NSL1Q12143 216 aa0.84□□□□□ -2.28
YDR261W-AYDR261W-A AHT1P29589 182 aa0.83□□□□□ -2.28
YDR261W-AYDR261W-A RME1P32338 300 aaKnown RBP0.83□□□□□ -2.28
YDR261W-AYDR261W-A YKR041WP36134 250 aa0.83□□□□□ -2.28
YDR261W-AYDR261W-A YER121WP40076 114 aa0.83□□□□□ -2.28
YDR261W-AYDR261W-A NRK1P53915 240 aa0.83□□□□□ -2.28
YDR261W-AYDR261W-A SNO1Q03144 224 aa0.83□□□□□ -2.28
YDR261W-AYDR261W-A YMR315WQ04869 349 aaKnown RBP0.83□□□□□ -2.28
YDR261W-AYDR261W-A YLR050CQ12155 161 aaKnown RBP0.83□□□□□ -2.28
YDR261W-AYDR261W-A YDL085C-AQ3E7B7 68 aaKnown RBP0.83□□□□□ -2.28
YDR261W-AYDR261W-A RAD9P14737 1309 aa0.82□□□□□ -2.28
YDR261W-AYDR261W-A YLR422WQ06409 1932 aa0.82□□□□□ -2.28
YDR261W-AYDR261W-A SNF4P12904 322 aa0.82□□□□□ -2.28
YDR261W-AYDR261W-A TRR1P29509 319 aaKnown RBP0.82□□□□□ -2.28
YDR261W-AYDR261W-A CAF4P36130 643 aa0.82□□□□□ -2.28
YDR261W-AYDR261W-A FMP32P43557 207 aa0.82□□□□□ -2.28
YDR261W-AYDR261W-A MOG1P47123 218 aa0.82□□□□□ -2.28
YDR261W-AYDR261W-A TDA4P47153 279 aa0.82□□□□□ -2.28
YDR261W-AYDR261W-A RTC4P53850 401 aa0.82□□□□□ -2.28
YDR261W-AYDR261W-A NAT3Q06504 195 aa0.82□□□□□ -2.28
YDR261W-AYDR261W-A YLR053CQ12026 108 aa0.82□□□□□ -2.28
YDR261W-AYDR261W-A TAH1P25638 111 aaPredicted RBP0.81□□□□□ -2.28
YDR261W-AYDR261W-A AHC2P25649 128 aa0.81□□□□□ -2.28
YDR261W-AYDR261W-A UBC8P28263 218 aa0.81□□□□□ -2.28
YDR261W-AYDR261W-A AME1P38313 324 aa0.81□□□□□ -2.28
YDR261W-AYDR261W-A SRP14P38985 146 aa0.81□□□□□ -2.28
YDR261W-AYDR261W-A SPC25P40014 221 aa0.81□□□□□ -2.28
YDR261W-AYDR261W-A PDS1P40316 373 aaPredicted RBP0.81□□□□□ -2.28
YDR261W-AYDR261W-A PGA1P53896 198 aa0.81□□□□□ -2.28
YDR261W-AYDR261W-A VPS71Q03433 280 aa0.81□□□□□ -2.28
YDR261W-AYDR261W-A HPT1Q04178 221 aaKnown RBP0.81□□□□□ -2.28
YDR261W-AYDR261W-A GRX8Q05926 109 aa0.81□□□□□ -2.28
YDR261W-AYDR261W-A RDI1Q12434 202 aa0.81□□□□□ -2.28
YDR261W-AYDR261W-A EFG1Q3E705 233 aaKnown RBP0.81□□□□□ -2.28
YDR261W-AYDR261W-A IGO2Q9P305 131 aa0.81□□□□□ -2.28
YDR261W-AYDR261W-A QCR2P07257 368 aa0.8□□□□□ -2.28
YDR261W-AYDR261W-A GCY1P14065 312 aaKnown RBP RIP-Chip data0.8□□□□□ -2.28not detected
YDR261W-AYDR261W-A SEN2P16658 377 aa0.8□□□□□ -2.28
YDR261W-AYDR261W-A IDP1P21954 428 aaKnown RBP0.8□□□□□ -2.28
YDR261W-AYDR261W-A YCR023CP25351 611 aa0.8□□□□□ -2.28
YDR261W-AYDR261W-A FIG1P38224 298 aa0.8□□□□□ -2.28
YDR261W-AYDR261W-A DER1P38307 211 aa0.8□□□□□ -2.28
YDR261W-AYDR261W-A NVJ1P38881 321 aa0.8□□□□□ -2.28
YDR261W-AYDR261W-A YNL200CP40165 246 aaKnown RBP0.8□□□□□ -2.28
YDR261W-AYDR261W-A YFL019CP43576 117 aa0.8□□□□□ -2.28
YDR261W-AYDR261W-A LSM1P47017 172 aaKnown RBP0.8□□□□□ -2.28
YDR261W-AYDR261W-A HSK3P69852 69 aa0.8□□□□□ -2.28
YDR261W-AYDR261W-A YDC1Q02896 317 aa0.8□□□□□ -2.28
YDR261W-AYDR261W-A GPI17Q04080 534 aa0.8□□□□□ -2.28
YDR261W-AYDR261W-A NOC4Q06512 552 aaPredicted RBP0.8□□□□□ -2.28
YDR261W-AYDR261W-A YOL024WQ08172 172 aa0.8□□□□□ -2.28
YDR261W-AYDR261W-A GRE1Q08969 168 aa0.8□□□□□ -2.28
YDR261W-AYDR261W-A YLR046CQ12253 270 aa0.8□□□□□ -2.28
YDR261W-AYDR261W-A DUR1,2P32528 1835 aaKnown RBP0.79□□□□□ -2.28
YDR261W-AYDR261W-A CMD1P06787 147 aaKnown RBP0.79□□□□□ -2.28
YDR261W-AYDR261W-A UGX2P32772 223 aa0.79□□□□□ -2.28
YDR261W-AYDR261W-A YKL102CP34249 101 aa0.79□□□□□ -2.28
YDR261W-AYDR261W-A YBR242WP38331 238 aa0.79□□□□□ -2.28
YDR261W-AYDR261W-A XPT1P47165 209 aa0.79□□□□□ -2.28
YDR261W-AYDR261W-A RRP17Q04031 235 aaPredicted RBP0.79□□□□□ -2.28
YDR261W-AYDR261W-A FYV12Q08559 129 aa0.79□□□□□ -2.28
YDR261W-AYDR261W-A YPR203WQ08994 102 aa0.79□□□□□ -2.28
YDR261W-AYDR261W-A PST2Q12335 198 aaKnown RBP0.79□□□□□ -2.28
YDR261W-AYDR261W-A MPD1Q12404 318 aaKnown RBP0.79□□□□□ -2.28
YDR261W-AYDR261W-A YLR412C-AQ3E742 68 aa0.79□□□□□ -2.28
YDR261W-AYDR261W-A RPS24AP0CX31 135 aaKnown RBP0.78□□□□□ -2.28
YDR261W-AYDR261W-A RPS24BP0CX32 135 aaKnown RBP0.78□□□□□ -2.28
YDR261W-AYDR261W-A NUF2P33895 451 aa0.78□□□□□ -2.28
YDR261W-AYDR261W-A YHL037CP38733 133 aa0.78□□□□□ -2.28
YDR261W-AYDR261W-A TTI2P47168 421 aa0.78□□□□□ -2.28
YDR261W-AYDR261W-A NQM1P53228 333 aaPredicted RBP0.78□□□□□ -2.28
YDR261W-AYDR261W-A PLP1Q04004 230 aa0.78□□□□□ -2.28
YDR261W-AYDR261W-A SHH4Q06236 168 aa0.78□□□□□ -2.28
YDR261W-AYDR261W-A BRX1Q08235 291 aaKnown RBP0.78□□□□□ -2.28
YDR261W-AYDR261W-A STF2P16965 84 aa0.77□□□□□ -2.29
YDR261W-AYDR261W-A SEC14P24280 304 aaKnown RBP0.77□□□□□ -2.29
YDR261W-AYDR261W-A SRP102P36057 244 aaPredicted RBP0.77□□□□□ -2.29
YDR261W-AYDR261W-A RFC2P40348 353 aa0.77□□□□□ -2.29
YDR261W-AYDR261W-A YFL051CP43552 160 aa0.77□□□□□ -2.29
YDR261W-AYDR261W-A SBH2P52871 88 aa0.77□□□□□ -2.29
YDR261W-AYDR261W-A YGL101WP53144 215 aa0.77□□□□□ -2.29
YDR261W-AYDR261W-A PIR1Q03178 341 aa0.77□□□□□ -2.29
YDR261W-AYDR261W-A AIM34Q03673 198 aa0.77□□□□□ -2.29
YDR261W-AYDR261W-A SPC2Q04969 178 aa0.77□□□□□ -2.29
YDR261W-AYDR261W-A YOR342CQ12182 319 aa0.77□□□□□ -2.29
YDR261W-AYDR261W-A DGK1Q12382 290 aa0.77□□□□□ -2.29
YDR261W-AYDR261W-A TAR1Q8TGM6 124 aa0.77□□□□□ -2.29
YDR261W-AYDR261W-A PET20Q99373 253 aa0.77□□□□□ -2.29
YDR261W-AYDR261W-A FMP49A0A023PZB3 126 aa0.76□□□□□ -2.29
YDR261W-AYDR261W-A RPS28BP0C0X0 67 aaKnown RBP0.76□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms