RNA–Protein interactions for RNA: YDR227W

SIR4, Transcript of SIR protein involved in assembly of silent chromatin domains, yeastyeast

Gene SIR4, Length 4,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR4YDR227W SAE3P89114 91 aa1.64□□□□□ -2.15
SIR4YDR227W RPL21AQ02753 160 aaKnown RBP1.64□□□□□ -2.15
SIR4YDR227W INP1Q03694 420 aa1.64□□□□□ -2.15
SIR4YDR227W ATG10Q07879 167 aa1.64□□□□□ -2.15
SIR4YDR227W COX4P04037 155 aa1.64□□□□□ -2.15
SIR4YDR227W YCR090CP25654 182 aaKnown RBP1.64□□□□□ -2.15
SIR4YDR227W LSM4P40070 187 aaKnown RBP1.64□□□□□ -2.15
SIR4YDR227W GLC8P41818 229 aa1.64□□□□□ -2.15
SIR4YDR227W IMD3P50095 523 aaKnown RBP1.64□□□□□ -2.15
SIR4YDR227W YMR099CQ03161 297 aaKnown RBP1.64□□□□□ -2.15
SIR4YDR227W DIG2Q03373 323 aaKnown RBP1.64□□□□□ -2.15
SIR4YDR227W YMR082CQ04276 118 aa1.64□□□□□ -2.15
SIR4YDR227W FSF1Q12029 327 aaKnown RBP1.64□□□□□ -2.15
SIR4YDR227W ATG34Q12292 412 aa1.64□□□□□ -2.15
SIR4YDR227W UBI4P0CG63 381 aaKnown RBP1.64□□□□□ -2.15
SIR4YDR227W TOD6P34219 525 aa1.64□□□□□ -2.15
SIR4YDR227W PDR17P53844 350 aa1.64□□□□□ -2.15
SIR4YDR227W LSM3P57743 89 aaKnown RBP1.64□□□□□ -2.15
SIR4YDR227W SWP1Q02795 286 aa1.64□□□□□ -2.15
SIR4YDR227W YHP1Q04116 353 aa1.64□□□□□ -2.15
SIR4YDR227W MBF1O14467 151 aaKnown RBP1.63□□□□□ -2.15
SIR4YDR227W MRS1P07266 363 aa1.63□□□□□ -2.15
SIR4YDR227W SGA1P08019 549 aa1.63□□□□□ -2.15
SIR4YDR227W SPS2P08459 502 aa1.63□□□□□ -2.15
SIR4YDR227W YCR022CP25620 114 aa1.63□□□□□ -2.15
SIR4YDR227W VMA11P32842 164 aa1.63□□□□□ -2.15
SIR4YDR227W PAN3P36102 679 aaPredicted RBP1.63□□□□□ -2.15
SIR4YDR227W ECM1P39715 212 aa1.63□□□□□ -2.15
SIR4YDR227W CWC27Q02770 301 aa1.63□□□□□ -2.15
SIR4YDR227W YMR166CQ03829 368 aa1.63□□□□□ -2.15
SIR4YDR227W YDR391CQ04170 232 aa1.63□□□□□ -2.15
SIR4YDR227W YLR118CQ12354 227 aa1.63□□□□□ -2.15
SIR4YDR227W IZH2Q12442 317 aa1.63□□□□□ -2.15
SIR4YDR227W POL2P21951 2222 aaKnown RBP1.63□□□□□ -2.15
SIR4YDR227W HFA1P32874 2273 aa1.63□□□□□ -2.15
SIR4YDR227W HEM4P06174 275 aa1.63□□□□□ -2.15
SIR4YDR227W AQY1P0CD91 305 aa1.63□□□□□ -2.15
SIR4YDR227W RPL30P14120 105 aaKnown RBP1.63□□□□□ -2.15
SIR4YDR227W YKR041WP36134 250 aa1.63□□□□□ -2.15
SIR4YDR227W RHO4Q00246 291 aa1.63□□□□□ -2.15
SIR4YDR227W YLR050CQ12155 161 aaKnown RBP1.63□□□□□ -2.15
SIR4YDR227W ATG5Q12380 294 aa1.63□□□□□ -2.15
SIR4YDR227W COX10P21592 462 aa1.63□□□□□ -2.15
SIR4YDR227W LSB5P25369 354 aa1.63□□□□□ -2.15
SIR4YDR227W UTR5P32630 166 aa1.63□□□□□ -2.15
SIR4YDR227W APS1P35181 156 aa1.63□□□□□ -2.15
SIR4YDR227W YBR063CP38083 404 aa1.63□□□□□ -2.15
SIR4YDR227W YER135CP40082 130 aa1.63□□□□□ -2.15
SIR4YDR227W ERG25P53045 309 aa1.63□□□□□ -2.15
SIR4YDR227W YNL033WP53964 284 aa1.63□□□□□ -2.15
SIR4YDR227W YNL019CP53975 284 aa1.63□□□□□ -2.15
SIR4YDR227W TMA23Q03525 211 aa1.63□□□□□ -2.15
SIR4YDR227W YMR114CQ04471 368 aaKnown RBP1.63□□□□□ -2.15
SIR4YDR227W YLR177WQ06251 628 aa1.63□□□□□ -2.15
SIR4YDR227W YPL162CQ12042 273 aa1.63□□□□□ -2.15
SIR4YDR227W NSL1Q12143 216 aa1.63□□□□□ -2.15
SIR4YDR227W JID1Q12350 301 aa1.63□□□□□ -2.15
SIR4YDR227W RAD10P06838 210 aa1.62□□□□□ -2.15
SIR4YDR227W SHE1P38200 338 aa1.62□□□□□ -2.15
SIR4YDR227W MBA1P38300 278 aa1.62□□□□□ -2.15
SIR4YDR227W COS8P38723 381 aa1.62□□□□□ -2.15
SIR4YDR227W SER2P42941 309 aa1.62□□□□□ -2.15
SIR4YDR227W YPL039WQ03080 316 aa1.62□□□□□ -2.15
SIR4YDR227W TVP18Q04767 167 aa1.62□□□□□ -2.15
SIR4YDR227W COX5BP00425 151 aa1.62□□□□□ -2.15
SIR4YDR227W RPS23AP0CX29 145 aaKnown RBP1.62□□□□□ -2.15
SIR4YDR227W RPS23BP0CX30 145 aa1.62□□□□□ -2.15
SIR4YDR227W RPL23AP0CX41 137 aaKnown RBP1.62□□□□□ -2.15
SIR4YDR227W RPL23BP0CX42 137 aaKnown RBP1.62□□□□□ -2.15
SIR4YDR227W RPS12P48589 143 aaKnown RBP1.62□□□□□ -2.15
SIR4YDR227W PHO23P50947 330 aa1.62□□□□□ -2.15
SIR4YDR227W ARO8P53090 500 aaKnown RBP1.62□□□□□ -2.15
SIR4YDR227W YGL118CP53132 145 aa1.62□□□□□ -2.15
SIR4YDR227W YGL101WP53144 215 aa1.62□□□□□ -2.15
SIR4YDR227W RSM27P53305 110 aa1.62□□□□□ -2.15
SIR4YDR227W SLU7Q02775 382 aaKnown RBP1.62□□□□□ -2.15
SIR4YDR227W NHP10Q03435 203 aa1.62□□□□□ -2.15
SIR4YDR227W SWC7Q06707 132 aa1.62□□□□□ -2.15
SIR4YDR227W RDL2Q08742 149 aaKnown RBP1.62□□□□□ -2.15
SIR4YDR227W RDI1Q12434 202 aa1.62□□□□□ -2.15
SIR4YDR227W DFM1Q12743 341 aaKnown RBP1.62□□□□□ -2.15
SIR4YDR227W YFR032C-BQ8TGU2 87 aa1.62□□□□□ -2.15
SIR4YDR227W RPC19P28000 142 aaKnown RBP1.62□□□□□ -2.15
SIR4YDR227W OXA1P39952 402 aa1.62□□□□□ -2.15
SIR4YDR227W YEA6P39953 335 aa1.62□□□□□ -2.15
SIR4YDR227W SDT1P53078 280 aa1.62□□□□□ -2.15
SIR4YDR227W HAL1Q01766 294 aa1.62□□□□□ -2.15
SIR4YDR227W YHC1Q05900 231 aaKnown RBP1.62□□□□□ -2.15
SIR4YDR227W MSA1Q08471 629 aa1.62□□□□□ -2.15
SIR4YDR227W SRL1Q08673 210 aa1.62□□□□□ -2.15
SIR4YDR227W HTL1Q9URQ5 78 aa1.62□□□□□ -2.15
SIR4YDR227W ATR1P13090 542 aa1.61□□□□□ -2.15
SIR4YDR227W MRPL28P36527 147 aa1.61□□□□□ -2.15
SIR4YDR227W YHL049CP38722 271 aa1.61□□□□□ -2.15
SIR4YDR227W CDC1P40986 491 aa1.61□□□□□ -2.15
SIR4YDR227W COS10P52924 374 aa1.61□□□□□ -2.15
SIR4YDR227W YKR005CQ02203 525 aa1.61□□□□□ -2.15
SIR4YDR227W MMT2Q08970 484 aa1.61□□□□□ -2.15
SIR4YDR227W MSA2P36157 363 aa1.61□□□□□ -2.15
SIR4YDR227W ERV29P53337 310 aa1.61□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 73.7 ms