RNA–Protein interactions for RNA: YDL150W

RPC53, Transcript of RNA polymerase III subunit C53, yeast

Gene RPC53, Length 1,269 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPC53	YDL150W	RPL23B	P0CX42	137 aa	Known RBP	3.53	□□□□□ -1.84
RPC53	YDL150W	NHP6B	P11633	99 aa	Known RBP	3.53	□□□□□ -1.84
RPC53	YDL150W	MRP17	P28778	131 aa		3.53	□□□□□ -1.84
RPC53	YDL150W	OCH1	P31755	480 aa		3.53	□□□□□ -1.84
RPC53	YDL150W	POP8	P38208	133 aa		3.53	□□□□□ -1.84
RPC53	YDL150W	POP2	P39008	433 aa		3.53	□□□□□ -1.84
RPC53	YDL150W	CCS1	P40202	249 aa	Known RBP	3.53	□□□□□ -1.84
RPC53	YDL150W	YIL012W	P40551	113 aa		3.53	□□□□□ -1.84
RPC53	YDL150W	GON7	P46984	123 aa		3.53	□□□□□ -1.84
RPC53	YDL150W	OKP1	P53298	406 aa		3.53	□□□□□ -1.84
RPC53	YDL150W	MRPS16	Q02608	121 aa		3.53	□□□□□ -1.84
RPC53	YDL150W	GMC1	Q04399	608 aa		3.53	□□□□□ -1.84
RPC53	YDL150W	SEN2	P16658	377 aa		3.52	□□□□□ -1.85
RPC53	YDL150W	MIR1	P23641	311 aa	Known RBP	3.52	□□□□□ -1.85
RPC53	YDL150W	IES6	P32617	166 aa		3.52	□□□□□ -1.85
RPC53	YDL150W	PPQ1	P32945	549 aa		3.52	□□□□□ -1.85
RPC53	YDL150W	CTR2	P38865	189 aa		3.52	□□□□□ -1.85
RPC53	YDL150W	SLM1	P40485	686 aa		3.52	□□□□□ -1.85
RPC53	YDL150W	GLR1	P41921	483 aa	Known RBP	3.52	□□□□□ -1.85
RPC53	YDL150W	SOL1	P50278	321 aa		3.52	□□□□□ -1.85
RPC53	YDL150W	SLX9	P53251	210 aa	Predicted RBP	3.52	□□□□□ -1.85
RPC53	YDL150W	YNL046W	P53956	172 aa		3.52	□□□□□ -1.85
RPC53	YDL150W	TSA2	Q04120	196 aa		3.52	□□□□□ -1.85
RPC53	YDL150W	FIT1	Q04433	528 aa		3.52	□□□□□ -1.85
RPC53	YDL150W	SYM1	Q06563	197 aa		3.52	□□□□□ -1.85
RPC53	YDL150W	SCP1	Q08873	200 aa		3.52	□□□□□ -1.85
RPC53	YDL150W	FEX2	Q08991	375 aa		3.52	□□□□□ -1.85
RPC53	YDL150W	FRE8	Q12209	686 aa		3.52	□□□□□ -1.85
RPC53	YDL150W	YOR192C-C	Q3E736	78 aa		3.52	□□□□□ -1.85
RPC53	YDL150W	URA2	P07259	2214 aa	Known RBP	3.51	□□□□□ -1.85
RPC53	YDL150W	ARG80	P07249	177 aa		3.51	□□□□□ -1.85
RPC53	YDL150W	TRR1	P29509	319 aa	Known RBP	3.51	□□□□□ -1.85
RPC53	YDL150W	RPB7	P34087	171 aa		3.51	□□□□□ -1.85
RPC53	YDL150W	SWD2	P36104	329 aa	Predicted RBP	3.51	□□□□□ -1.85
RPC53	YDL150W	GPI18	P38211	433 aa		3.51	□□□□□ -1.85
RPC53	YDL150W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	3.51	□□□□□ -1.85	not detected
RPC53	YDL150W	BMT5	P40493	336 aa		3.51	□□□□□ -1.85
RPC53	YDL150W	IGD1	P43598	195 aa		3.51	□□□□□ -1.85
RPC53	YDL150W	PIR5	P46999	287 aa		3.51	□□□□□ -1.85
RPC53	YDL150W	SBH2	P52871	88 aa		3.51	□□□□□ -1.85
RPC53	YDL150W	HSK3	P69852	69 aa		3.51	□□□□□ -1.85
RPC53	YDL150W	FEX1	Q08913	375 aa		3.51	□□□□□ -1.85
RPC53	YDL150W	ATP16	Q12165	160 aa		3.51	□□□□□ -1.85
RPC53	YDL150W	RFM1	Q12192	310 aa		3.51	□□□□□ -1.85
RPC53	YDL150W	PRM4	Q12498	284 aa		3.51	□□□□□ -1.85
RPC53	YDL150W	YCL048W-A	Q2V2Q2	79 aa		3.51	□□□□□ -1.85
RPC53	YDL150W	YLR365W	Q7LIF2	110 aa		3.51	□□□□□ -1.85
RPC53	YDL150W	SUA5	P32579	426 aa		3.5	□□□□□ -1.85
RPC53	YDL150W	UTP30	P36144	274 aa	Known RBP	3.5	□□□□□ -1.85
RPC53	YDL150W	YHL044W	P38727	235 aa		3.5	□□□□□ -1.85
RPC53	YDL150W	RRF1	P38771	230 aa		3.5	□□□□□ -1.85
RPC53	YDL150W	SSO2	P39926	295 aa		3.5	□□□□□ -1.85
RPC53	YDL150W	YER137C	P40083	148 aa	Known RBP	3.5	□□□□□ -1.85
RPC53	YDL150W	XPT1	P47165	209 aa		3.5	□□□□□ -1.85
RPC53	YDL150W	YGL262W	P53054	175 aa		3.5	□□□□□ -1.85
RPC53	YDL150W	NIF3	P53081	288 aa		3.5	□□□□□ -1.85
RPC53	YDL150W	GEP7	P53171	287 aa		3.5	□□□□□ -1.85
RPC53	YDL150W	YNR064C	P53750	290 aa		3.5	□□□□□ -1.85
RPC53	YDL150W	RPL21A	Q02753	160 aa	Known RBP	3.5	□□□□□ -1.85
RPC53	YDL150W	THI74	Q04083	370 aa		3.5	□□□□□ -1.85
RPC53	YDL150W	RIM9	Q04734	239 aa		3.5	□□□□□ -1.85
RPC53	YDL150W	YOL118C	Q08259	102 aa		3.5	□□□□□ -1.85
RPC53	YDL150W	YOR029W	Q12243	111 aa		3.5	□□□□□ -1.85
RPC53	YDL150W	BBP1	Q12365	385 aa		3.5	□□□□□ -1.85
RPC53	YDL150W	RTR2	Q12378	196 aa		3.5	□□□□□ -1.85
RPC53	YDL150W	RPL21B	Q12672	160 aa	Known RBP	3.5	□□□□□ -1.85
RPC53	YDL150W	TPI1	P00942	248 aa	Known RBP	3.49	□□□□□ -1.85
RPC53	YDL150W	FUS3	P16892	353 aa	Known RBP	3.49	□□□□□ -1.85
RPC53	YDL150W	YCR016W	P25617	290 aa	Known RBP	3.49	□□□□□ -1.85
RPC53	YDL150W	RPB9	P27999	122 aa		3.49	□□□□□ -1.85
RPC53	YDL150W	SRL3	P36167	246 aa		3.49	□□□□□ -1.85
RPC53	YDL150W	PCL7	P40186	285 aa		3.49	□□□□□ -1.85
RPC53	YDL150W	YIR035C	P40579	254 aa		3.49	□□□□□ -1.85
RPC53	YDL150W	ECM18	Q04623	453 aa		3.49	□□□□□ -1.85
RPC53	YDL150W	NOC4	Q06512	552 aa	Predicted RBP	3.49	□□□□□ -1.85
RPC53	YDL150W	CSI2	Q08054	341 aa		3.49	□□□□□ -1.85
RPC53	YDL150W	TFC7	Q12415	435 aa		3.49	□□□□□ -1.85
RPC53	YDL150W	YPR108W-A	Q3E7B3	70 aa		3.49	□□□□□ -1.85
RPC53	YDL150W	HUG1	Q6Q5K6	68 aa		3.49	□□□□□ -1.85
RPC53	YDL150W	YMR105W-A	Q8TGS8	64 aa		3.49	□□□□□ -1.85
RPC53	YDL150W	MDN1	Q12019	4910 aa	Known RBP	3.49	□□□□□ -1.85
RPC53	YDL150W	QCR2	P07257	368 aa		3.48	□□□□□ -1.85
RPC53	YDL150W	PUT1	P09368	476 aa		3.48	□□□□□ -1.85
RPC53	YDL150W	ACB1	P31787	87 aa		3.48	□□□□□ -1.85
RPC53	YDL150W	TCA17	P32613	152 aa		3.48	□□□□□ -1.85
RPC53	YDL150W	YUH1	P35127	236 aa		3.48	□□□□□ -1.85
RPC53	YDL150W	CUE1	P38428	203 aa		3.48	□□□□□ -1.85
RPC53	YDL150W	VMA22	P38784	181 aa		3.48	□□□□□ -1.85
RPC53	YDL150W	TTI2	P47168	421 aa		3.48	□□□□□ -1.85
RPC53	YDL150W	YPS5	P53057	165 aa		3.48	□□□□□ -1.85
RPC53	YDL150W	MRPL50	P53724	139 aa		3.48	□□□□□ -1.85
RPC53	YDL150W	PLP1	Q04004	230 aa		3.48	□□□□□ -1.85
RPC53	YDL150W	PRP11	Q07350	266 aa	Predicted RBP	3.48	□□□□□ -1.85
RPC53	YDL150W	MSA1	Q08471	629 aa		3.48	□□□□□ -1.85
RPC53	YDL150W	YOR292C	Q08743	309 aa		3.48	□□□□□ -1.85
RPC53	YDL150W	DGK1	Q12382	290 aa		3.48	□□□□□ -1.85
RPC53	YDL150W	CKS1	P20486	150 aa	Known RBP	3.47	□□□□□ -1.85
RPC53	YDL150W	MAG1	P22134	296 aa	Known RBP	3.47	□□□□□ -1.85
RPC53	YDL150W	ERG2	P32352	222 aa		3.47	□□□□□ -1.85
RPC53	YDL150W	PEX22	P39718	180 aa		3.47	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms