RNA–Protein interactions for RNA: YBR254C

TRS20, Transcript of Core component of transport protein particle (TRAPP) complexes I-III, yeastyeast

Gene TRS20, Length 528 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS20YBR254C SFK1P35735 353 aa1.23□□□□□ -2.21
TRS20YBR254C PAM17P36147 197 aa1.23□□□□□ -2.21
TRS20YBR254C MAK5P38112 773 aaPredicted RBP1.23□□□□□ -2.21
TRS20YBR254C RCE1Q03530 315 aa1.23□□□□□ -2.21
TRS20YBR254C YLR422WQ06409 1932 aa1.23□□□□□ -2.21
TRS20YBR254C MDM35O60200 86 aa1.22□□□□□ -2.21
TRS20YBR254C CMD1P06787 147 aaKnown RBP1.22□□□□□ -2.21
TRS20YBR254C ARO7P32178 256 aa1.22□□□□□ -2.21
TRS20YBR254C XPT1P47165 209 aa1.22□□□□□ -2.21
TRS20YBR254C MPA43P53583 542 aaPredicted RBP1.22□□□□□ -2.21
TRS20YBR254C YNL033WP53964 284 aa1.22□□□□□ -2.21
TRS20YBR254C DAD4P69851 72 aa1.22□□□□□ -2.21
TRS20YBR254C DIG2Q03373 323 aaKnown RBP1.22□□□□□ -2.21
TRS20YBR254C MZM1Q03429 123 aaPredicted RBP1.22□□□□□ -2.21
TRS20YBR254C PRP11Q07350 266 aaPredicted RBP1.22□□□□□ -2.21
TRS20YBR254C DGK1Q12382 290 aa1.22□□□□□ -2.21
TRS20YBR254C STP22P25604 385 aa1.21□□□□□ -2.22
TRS20YBR254C GSP2P32836 220 aaKnown RBP1.21□□□□□ -2.22
TRS20YBR254C TTI2P47168 421 aa1.21□□□□□ -2.22
TRS20YBR254C TMA20P89886 181 aaPredicted RBP1.21□□□□□ -2.22
TRS20YBR254C VPS28Q02767 242 aa1.21□□□□□ -2.22
TRS20YBR254C FYV12Q08559 129 aa1.21□□□□□ -2.22
TRS20YBR254C DAS2Q12084 232 aa1.21□□□□□ -2.22
TRS20YBR254C YOR214CQ12282 236 aa1.21□□□□□ -2.22
TRS20YBR254C QCR2P07257 368 aa1.2□□□□□ -2.22
TRS20YBR254C HSP30P25619 332 aa1.2□□□□□ -2.22
TRS20YBR254C EDC3P39998 551 aaKnown RBP1.2□□□□□ -2.22
TRS20YBR254C FLX1P40464 311 aa1.2□□□□□ -2.22
TRS20YBR254C RNH202Q05635 350 aa1.2□□□□□ -2.22
TRS20YBR254C YOR015WQ12169 119 aa1.2□□□□□ -2.22
TRS20YBR254C ATP20Q12233 115 aa1.2□□□□□ -2.22
TRS20YBR254C YNL146C-AQ3E7Z1 64 aa1.2□□□□□ -2.22
TRS20YBR254C COX8P04039 78 aa1.19□□□□□ -2.22
TRS20YBR254C RAD6P06104 172 aa1.19□□□□□ -2.22
TRS20YBR254C PHO85P17157 305 aa1.19□□□□□ -2.22
TRS20YBR254C YCR023CP25351 611 aa1.19□□□□□ -2.22
TRS20YBR254C RRT1P38192 103 aa1.19□□□□□ -2.22
TRS20YBR254C FES1P38260 290 aa1.19□□□□□ -2.22
TRS20YBR254C YER121WP40076 114 aa1.19□□□□□ -2.22
TRS20YBR254C RIO2P40160 425 aaKnown RBP1.19□□□□□ -2.22
TRS20YBR254C GLR1P41921 483 aaKnown RBP1.19□□□□□ -2.22
TRS20YBR254C THG1P53215 237 aaKnown RBP1.19□□□□□ -2.22
TRS20YBR254C YKR005CQ02203 525 aa1.19□□□□□ -2.22
TRS20YBR254C PIR1Q03178 341 aa1.19□□□□□ -2.22
TRS20YBR254C YDR476CQ03362 224 aa1.19□□□□□ -2.22
TRS20YBR254C MAK3Q03503 176 aa1.19□□□□□ -2.22
TRS20YBR254C GAL83Q04739 417 aa1.19□□□□□ -2.22
TRS20YBR254C YPR127WQ06494 345 aa1.19□□□□□ -2.22
TRS20YBR254C YLR053CQ12026 108 aa1.19□□□□□ -2.22
TRS20YBR254C MSB2P32334 1306 aa1.18□□□□□ -2.22
TRS20YBR254C RPS28BP0C0X0 67 aaKnown RBP1.18□□□□□ -2.22
TRS20YBR254C NUF2P33895 451 aa1.18□□□□□ -2.22
TRS20YBR254C AME1P38313 324 aa1.18□□□□□ -2.22
TRS20YBR254C YHL018WP38744 120 aaPredicted RBP1.18□□□□□ -2.22
TRS20YBR254C HYR1P40581 163 aaKnown RBP1.18□□□□□ -2.22
TRS20YBR254C ALB1P47019 175 aaPredicted RBP1.18□□□□□ -2.22
TRS20YBR254C YGL101WP53144 215 aa1.18□□□□□ -2.22
TRS20YBR254C CWC27Q02770 301 aa1.18□□□□□ -2.22
TRS20YBR254C RDI1Q12434 202 aa1.18□□□□□ -2.22
TRS20YBR254C RPS28AQ3E7X9 67 aaPredicted RBP1.18□□□□□ -2.22
TRS20YBR254C RME1P32338 300 aaKnown RBP1.17□□□□□ -2.22
TRS20YBR254C YHL042WP38729 150 aa1.17□□□□□ -2.22
TRS20YBR254C HPA3P39979 161 aa1.17□□□□□ -2.22
TRS20YBR254C YNL200CP40165 246 aaKnown RBP1.17□□□□□ -2.22
TRS20YBR254C YAE1P47118 141 aaPredicted RBP1.17□□□□□ -2.22
TRS20YBR254C UBC7Q02159 165 aa1.17□□□□□ -2.22
TRS20YBR254C UPS3Q04006 179 aa1.17□□□□□ -2.22
TRS20YBR254C FIT2Q08906 153 aa1.17□□□□□ -2.22
TRS20YBR254C RPB7P34087 171 aa1.16□□□□□ -2.22
TRS20YBR254C CPR5P35176 225 aa1.16□□□□□ -2.22
TRS20YBR254C YRA2P36036 203 aaKnown RBP RIP-Chip data1.16□□□□□ -2.22not detected
TRS20YBR254C FYV4P38783 130 aaPredicted RBP1.16□□□□□ -2.22
TRS20YBR254C YFH7P43591 353 aa1.16□□□□□ -2.22
TRS20YBR254C SOL1P50278 321 aa1.16□□□□□ -2.22
TRS20YBR254C YGL235WP53071 178 aa1.16□□□□□ -2.22
TRS20YBR254C HSK3P69852 69 aa1.16□□□□□ -2.22
TRS20YBR254C RRP17Q04031 235 aaPredicted RBP1.16□□□□□ -2.22
TRS20YBR254C THI74Q04083 370 aa1.16□□□□□ -2.22
TRS20YBR254C PBI2P0CT04 75 aaKnown RBP1.15□□□□□ -2.23
TRS20YBR254C UBC6P33296 250 aaPredicted RBP1.15□□□□□ -2.23
TRS20YBR254C DML1Q03652 475 aa1.15□□□□□ -2.23
TRS20YBR254C YHP1Q04116 353 aa1.15□□□□□ -2.23
TRS20YBR254C HRD1Q08109 551 aa1.15□□□□□ -2.23
TRS20YBR254C TRM3Q07527 1436 aa1.15□□□□□ -2.23
TRS20YBR254C MAK31P23059 88 aa1.14□□□□□ -2.23
TRS20YBR254C ARC19P33204 171 aaKnown RBP1.14□□□□□ -2.23
TRS20YBR254C CSH1P38287 376 aa1.14□□□□□ -2.23
TRS20YBR254C YEL073CP39974 107 aa1.14□□□□□ -2.23
TRS20YBR254C SOK1P40317 901 aa1.14□□□□□ -2.23
TRS20YBR254C MET31Q03081 177 aa1.14□□□□□ -2.23
TRS20YBR254C RIM9Q04734 239 aa1.14□□□□□ -2.23
TRS20YBR254C ATG41Q12048 136 aa1.14□□□□□ -2.23
TRS20YBR254C YMR030W-AQ3E760 96 aa1.14□□□□□ -2.23
TRS20YBR254C CDC39P25655 2108 aaKnown RBP1.13□□□□□ -2.23
TRS20YBR254C STF2P16965 84 aa1.13□□□□□ -2.23
TRS20YBR254C DER1P38307 211 aa1.13□□□□□ -2.23
TRS20YBR254C YEL028WP39989 153 aa1.13□□□□□ -2.23
TRS20YBR254C YFL065CP43539 102 aa1.13□□□□□ -2.23
TRS20YBR254C SBH2P52871 88 aa1.13□□□□□ -2.23
TRS20YBR254C HHT1P61830 136 aa1.13□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 68.6 ms