RNA–Protein interactions for RNA: YAL043C

PTA1, Transcript of Subunit of holo-CPF, yeastyeast

Gene PTA1, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTA1YAL043C YKL107WP34251 309 aa3.46□□□□□ -1.86
PTA1YAL043C PAM17P36147 197 aa3.46□□□□□ -1.86
PTA1YAL043C YBR096WP38256 230 aa3.46□□□□□ -1.86
PTA1YAL043C SLM6P38343 150 aa3.46□□□□□ -1.86
PTA1YAL043C YBR292CP38357 123 aa3.46□□□□□ -1.86
PTA1YAL043C MTC6P38849 526 aa3.46□□□□□ -1.86
PTA1YAL043C BDH1P39714 382 aa3.46□□□□□ -1.86
PTA1YAL043C NSA2P40078 261 aaKnown RBP3.46□□□□□ -1.86
PTA1YAL043C ECO1P43605 281 aa3.46□□□□□ -1.86
PTA1YAL043C YJL163CP46996 555 aa3.46□□□□□ -1.86
PTA1YAL043C NRM1P53718 249 aa3.46□□□□□ -1.86
PTA1YAL043C CYT2Q00873 224 aa3.46□□□□□ -1.86
PTA1YAL043C YVH1Q02256 364 aaKnown RBP3.46□□□□□ -1.86
PTA1YAL043C RCE1Q03530 315 aa3.46□□□□□ -1.86
PTA1YAL043C YHP1Q04116 353 aa3.46□□□□□ -1.86
PTA1YAL043C GEP5Q12393 293 aa3.46□□□□□ -1.86
PTA1YAL043C RAX2Q12465 1220 aa3.46□□□□□ -1.86
PTA1YAL043C YOS1Q3E834 85 aa3.46□□□□□ -1.86
PTA1YAL043C YLR365WQ7LIF2 110 aa3.46□□□□□ -1.86
PTA1YAL043C ATG40Q99325 256 aa3.46□□□□□ -1.86
PTA1YAL043C TRA1P38811 3744 aa3.46□□□□□ -1.86
PTA1YAL043C AHT1P29589 182 aa3.46□□□□□ -1.86
PTA1YAL043C UTH1P36135 365 aa3.46□□□□□ -1.86
PTA1YAL043C DER1P38307 211 aa3.46□□□□□ -1.86
PTA1YAL043C LSM4P40070 187 aaKnown RBP3.46□□□□□ -1.86
PTA1YAL043C PAU15P40585 124 aa3.46□□□□□ -1.86
PTA1YAL043C HCH1P53834 153 aa3.46□□□□□ -1.86
PTA1YAL043C STD1Q02794 444 aa3.46□□□□□ -1.86
PTA1YAL043C PAM18Q07914 168 aa3.46□□□□□ -1.86
PTA1YAL043C NIP7Q08962 181 aaKnown RBP3.46□□□□□ -1.86
PTA1YAL043C POM34Q12445 299 aa3.46□□□□□ -1.86
PTA1YAL043C TOR2P32600 2474 aaKnown RBP3.45□□□□□ -1.86
PTA1YAL043C CDC7P06243 507 aa3.45□□□□□ -1.86
PTA1YAL043C DFR1P07807 211 aaKnown RBP RIP-Chip data3.45□□□□□ -1.86not detected
PTA1YAL043C STE4P18851 423 aa3.45□□□□□ -1.86
PTA1YAL043C LSB5P25369 354 aa3.45□□□□□ -1.86
PTA1YAL043C TRS20P38334 175 aa3.45□□□□□ -1.86
PTA1YAL043C YJR015WP47090 510 aa3.45□□□□□ -1.86
PTA1YAL043C TTI2P47168 421 aa3.45□□□□□ -1.86
PTA1YAL043C MGA1P53050 456 aa3.45□□□□□ -1.86
PTA1YAL043C LST7P53237 242 aa3.45□□□□□ -1.86
PTA1YAL043C RFM1Q12192 310 aa3.45□□□□□ -1.86
PTA1YAL043C YNR034W-AQ3E841 98 aa3.45□□□□□ -1.86
PTA1YAL043C SCS22Q6Q595 175 aa3.45□□□□□ -1.86
PTA1YAL043C CDC26P14724 124 aa3.45□□□□□ -1.86
PTA1YAL043C MRPS9P38120 278 aa3.45□□□□□ -1.86
PTA1YAL043C DFG10P40526 253 aa3.45□□□□□ -1.86
PTA1YAL043C OST1P41543 476 aaKnown RBP3.45□□□□□ -1.86
PTA1YAL043C OST3P48439 350 aa3.45□□□□□ -1.86
PTA1YAL043C DSK2P48510 373 aa3.45□□□□□ -1.86
PTA1YAL043C ERV14P53173 138 aa3.45□□□□□ -1.86
PTA1YAL043C YGR017WP53210 297 aa3.45□□□□□ -1.86
PTA1YAL043C YIP3P53633 176 aa3.45□□□□□ -1.86
PTA1YAL043C SAE3P89114 91 aa3.45□□□□□ -1.86
PTA1YAL043C API2Q04413 109 aa3.45□□□□□ -1.86
PTA1YAL043C YTH1Q06102 208 aaPredicted RBP3.45□□□□□ -1.86
PTA1YAL043C FLO9P39712 1322 aa3.45□□□□□ -1.86
PTA1YAL043C POR1P04840 283 aaKnown RBP3.44□□□□□ -1.86
PTA1YAL043C RPB10P22139 70 aa3.44□□□□□ -1.86
PTA1YAL043C YKL070WP36087 169 aa3.44□□□□□ -1.86
PTA1YAL043C RPL13BP40212 199 aaKnown RBP3.44□□□□□ -1.86
PTA1YAL043C YGR269WP40326 108 aa3.44□□□□□ -1.86
PTA1YAL043C YIL029CP40538 142 aa3.44□□□□□ -1.86
PTA1YAL043C YAR1P46683 200 aa3.44□□□□□ -1.86
PTA1YAL043C ATG27P46989 271 aa3.44□□□□□ -1.86
PTA1YAL043C YGR050CP53231 118 aa3.44□□□□□ -1.86
PTA1YAL043C HSK3P69852 69 aa3.44□□□□□ -1.86
PTA1YAL043C NAT5Q08689 176 aa3.44□□□□□ -1.86
PTA1YAL043C USB1Q12208 290 aaKnown RBP3.44□□□□□ -1.86
PTA1YAL043C RPL13AQ12690 199 aaPredicted RBP3.44□□□□□ -1.86
PTA1YAL043C FMP49A0A023PZB3 126 aa3.44□□□□□ -1.86
PTA1YAL043C COX1P00401 534 aa3.44□□□□□ -1.86
PTA1YAL043C RPL27AP0C2H6 136 aaKnown RBP3.44□□□□□ -1.86
PTA1YAL043C RPL27BP0C2H7 136 aaKnown RBP3.44□□□□□ -1.86
PTA1YAL043C CUP2P15315 225 aa3.44□□□□□ -1.86
PTA1YAL043C REC104P33323 182 aa3.44□□□□□ -1.86
PTA1YAL043C YBR220CP38318 560 aa3.44□□□□□ -1.86
PTA1YAL043C UIP3P39547 235 aa3.44□□□□□ -1.86
PTA1YAL043C YER084WP40057 128 aa3.44□□□□□ -1.86
PTA1YAL043C PHS1P40857 217 aa3.44□□□□□ -1.86
PTA1YAL043C PAU5P43575 122 aa3.44□□□□□ -1.86
PTA1YAL043C UBC13P52490 153 aa3.44□□□□□ -1.86
PTA1YAL043C YIP5P53108 310 aa3.44□□□□□ -1.86
PTA1YAL043C ATG4P53867 494 aa3.44□□□□□ -1.86
PTA1YAL043C MOT3P54785 490 aaKnown RBP3.44□□□□□ -1.86
PTA1YAL043C CUE4Q04201 117 aaPredicted RBP3.44□□□□□ -1.86
PTA1YAL043C MED7Q08278 222 aa3.44□□□□□ -1.86
PTA1YAL043C YDL180WQ12301 547 aa3.44□□□□□ -1.86
PTA1YAL043C YLR361C-AQ3E795 98 aa3.44□□□□□ -1.86
PTA1YAL043C MRPL44P19956 98 aa3.43□□□□□ -1.86
PTA1YAL043C PEX4P29340 183 aa3.43□□□□□ -1.86
PTA1YAL043C HSP10P38910 106 aa3.43□□□□□ -1.86
PTA1YAL043C RSM10Q03201 203 aa3.43□□□□□ -1.86
PTA1YAL043C TMA10Q06177 86 aa3.43□□□□□ -1.86
PTA1YAL043C PIN3Q06449 215 aa3.43□□□□□ -1.86
PTA1YAL043C POS5Q06892 414 aa3.43□□□□□ -1.86
PTA1YAL043C HNT3Q08702 217 aa3.43□□□□□ -1.86
PTA1YAL043C VPS63O13549 108 aa3.43□□□□□ -1.86
PTA1YAL043C ERG8P24521 451 aa3.43□□□□□ -1.86
PTA1YAL043C MIG1P27705 504 aa3.43□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 67.1 ms