RNA–Protein interactions for RNA: YAL014C

SYN8, Transcript of Endosomal SNARE related to mammalian syntaxin 8, yeast

Gene SYN8, Length 768 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SYN8	YAL014C	QDR3	P38227	689 aa		4.16	□□□□□ -1.74
SYN8	YAL014C	YHR138C	P38841	114 aa	Predicted RBP	4.16	□□□□□ -1.74
SYN8	YAL014C	LST8	P41318	303 aa		4.16	□□□□□ -1.74
SYN8	YAL014C	BNA6	P43619	295 aa		4.16	□□□□□ -1.74
SYN8	YAL014C	ERV25	P54837	211 aa	Known RBP	4.16	□□□□□ -1.74
SYN8	YAL014C	TDA1	Q03533	586 aa		4.16	□□□□□ -1.74
SYN8	YAL014C	YLR031W	Q07978	186 aa		4.16	□□□□□ -1.74
SYN8	YAL014C	BOL1	Q3E793	110 aa		4.16	□□□□□ -1.74
SYN8	YAL014C	PDC2	P32896	925 aa		4.15	□□□□□ -1.75
SYN8	YAL014C	RIB7	P33312	244 aa		4.15	□□□□□ -1.75
SYN8	YAL014C	MED8	P38304	223 aa		4.15	□□□□□ -1.75
SYN8	YAL014C	HTD2	P38790	280 aa	Known RBP	4.15	□□□□□ -1.75
SYN8	YAL014C	PCL6	P40038	420 aa		4.15	□□□□□ -1.75
SYN8	YAL014C	YPI1	P43587	155 aa		4.15	□□□□□ -1.75
SYN8	YAL014C	RRG8	Q06109	277 aa		4.15	□□□□□ -1.75
SYN8	YAL014C	TRR1	P29509	319 aa	Known RBP	4.14	□□□□□ -1.75
SYN8	YAL014C	DAD2	P36162	133 aa		4.14	□□□□□ -1.75
SYN8	YAL014C	MIC12	P38341	106 aa		4.14	□□□□□ -1.75
SYN8	YAL014C	YNL194C	P40169	301 aa		4.14	□□□□□ -1.75
SYN8	YAL014C	RPA34	P47006	233 aa	Predicted RBP	4.14	□□□□□ -1.75
SYN8	YAL014C	YGR219W	P53307	113 aa		4.14	□□□□□ -1.75
SYN8	YAL014C	HOM6	P31116	359 aa	Known RBP	4.13	□□□□□ -1.75
SYN8	YAL014C	ALK2	P32789	676 aa	Predicted RBP	4.13	□□□□□ -1.75
SYN8	YAL014C	POP2	P39008	433 aa		4.13	□□□□□ -1.75
SYN8	YAL014C	SIM1	P40472	476 aa		4.13	□□□□□ -1.75
SYN8	YAL014C	CAT5	P41735	233 aa		4.13	□□□□□ -1.75
SYN8	YAL014C	YIF1	P53845	314 aa	Known RBP	4.13	□□□□□ -1.75
SYN8	YAL014C	GRX3	Q03835	250 aa		4.13	□□□□□ -1.75
SYN8	YAL014C	FSH2	Q05015	223 aa		4.13	□□□□□ -1.75
SYN8	YAL014C	MRPL35	Q06678	367 aa		4.13	□□□□□ -1.75
SYN8	YAL014C	HRD1	Q08109	551 aa		4.13	□□□□□ -1.75
SYN8	YAL014C	DCP1	Q12517	231 aa	Predicted RBP	4.13	□□□□□ -1.75
SYN8	YAL014C	SUS1	Q6WNK7	96 aa		4.13	□□□□□ -1.75
SYN8	YAL014C	VPS63	O13549	108 aa		4.12	□□□□□ -1.75
SYN8	YAL014C	MRS3	P10566	314 aa		4.12	□□□□□ -1.75
SYN8	YAL014C	FMT1	P32785	401 aa		4.12	□□□□□ -1.75
SYN8	YAL014C	COS8	P38723	381 aa		4.12	□□□□□ -1.75
SYN8	YAL014C	WSS1	P38838	269 aa		4.12	□□□□□ -1.75
SYN8	YAL014C	MST28	P39552	234 aa		4.12	□□□□□ -1.75
SYN8	YAL014C	AGX1	P43567	385 aa		4.12	□□□□□ -1.75
SYN8	YAL014C	MST27	P53176	234 aa		4.12	□□□□□ -1.75
SYN8	YAL014C	ERV29	P53337	310 aa		4.12	□□□□□ -1.75
SYN8	YAL014C	RDS3	Q06835	107 aa	Predicted RBP	4.12	□□□□□ -1.75
SYN8	YAL014C	YPR013C	Q12145	317 aa		4.12	□□□□□ -1.75
SYN8	YAL014C	SOD1	P00445	154 aa	Known RBP	4.11	□□□□□ -1.75
SYN8	YAL014C	MRPL4	P36517	319 aa		4.11	□□□□□ -1.75
SYN8	YAL014C	GOS1	P38736	223 aa		4.11	□□□□□ -1.75
SYN8	YAL014C	LSM12	P38828	187 aa	Known RBP	4.11	□□□□□ -1.75
SYN8	YAL014C	YAR068W	P39564	161 aa		4.11	□□□□□ -1.75
SYN8	YAL014C	SNU13	P39990	126 aa	Known RBP	4.11	□□□□□ -1.75
SYN8	YAL014C	DFG10	P40526	253 aa		4.11	□□□□□ -1.75
SYN8	YAL014C	ALG13	P53178	202 aa		4.11	□□□□□ -1.75
SYN8	YAL014C	SWT21	P53873	357 aa	Predicted RBP	4.11	□□□□□ -1.75
SYN8	YAL014C	GIM3	P53900	129 aa		4.11	□□□□□ -1.75
SYN8	YAL014C	VBA1	Q04301	562 aa		4.11	□□□□□ -1.75
SYN8	YAL014C	MGR3	Q04472	501 aa		4.11	□□□□□ -1.75
SYN8	YAL014C	KEI1	Q06346	221 aa		4.11	□□□□□ -1.75
SYN8	YAL014C	YNG1	Q08465	219 aa		4.11	□□□□□ -1.75
SYN8	YAL014C	PEX27	Q08580	376 aa		4.11	□□□□□ -1.75
SYN8	YAL014C	AGC1	Q12482	902 aa		4.11	□□□□□ -1.75
SYN8	YAL014C	PET20	Q99373	253 aa		4.11	□□□□□ -1.75
SYN8	YAL014C	ECM25	P32525	599 aa		4.1	□□□□□ -1.75
SYN8	YAL014C	SSU72	P53538	206 aa	Predicted RBP	4.1	□□□□□ -1.75
SYN8	YAL014C	RTT103	Q05543	409 aa		4.1	□□□□□ -1.75
SYN8	YAL014C	SCP1	Q08873	200 aa		4.1	□□□□□ -1.75
SYN8	YAL014C	PRM4	Q12498	284 aa		4.1	□□□□□ -1.75
SYN8	YAL014C	CAP2	P13517	287 aa		4.09	□□□□□ -1.75
SYN8	YAL014C	MIR1	P23641	311 aa	Known RBP	4.09	□□□□□ -1.75
SYN8	YAL014C	MRPL27	P36526	146 aa	Predicted RBP	4.09	□□□□□ -1.75
SYN8	YAL014C	GPX2	P38143	162 aa		4.09	□□□□□ -1.75
SYN8	YAL014C	POP8	P38208	133 aa		4.09	□□□□□ -1.75
SYN8	YAL014C	YHR122W	P38829	231 aa		4.09	□□□□□ -1.75
SYN8	YAL014C	AIM20	P40451	204 aa		4.09	□□□□□ -1.75
SYN8	YAL014C	ARP3	P47117	449 aa	Known RBP	4.09	□□□□□ -1.75
SYN8	YAL014C	RBL2	P48606	106 aa	Known RBP	4.09	□□□□□ -1.75
SYN8	YAL014C	COX12	Q01519	83 aa		4.09	□□□□□ -1.75
SYN8	YAL014C	ATG39	Q06159	398 aa		4.09	□□□□□ -1.75
SYN8	YAL014C	YOR283W	Q12040	230 aa	Known RBP	4.09	□□□□□ -1.75
SYN8	YAL014C	ATG5	Q12380	294 aa		4.09	□□□□□ -1.75
SYN8	YAL014C	ATG31	Q12421	196 aa		4.09	□□□□□ -1.75
SYN8	YAL014C	YCR022C	P25620	114 aa		4.08	□□□□□ -1.76
SYN8	YAL014C	DOG2	P38773	246 aa		4.08	□□□□□ -1.76
SYN8	YAL014C	DOG1	P38774	246 aa		4.08	□□□□□ -1.76
SYN8	YAL014C	GVP36	P40531	326 aa	Known RBP	4.08	□□□□□ -1.76
SYN8	YAL014C	TDA4	P47153	279 aa		4.08	□□□□□ -1.76
SYN8	YAL014C	MIC26	P50087	233 aa		4.08	□□□□□ -1.76
SYN8	YAL014C	FYV6	P53913	173 aa		4.08	□□□□□ -1.76
SYN8	YAL014C	DYN2	Q02647	92 aa		4.08	□□□□□ -1.76
SYN8	YAL014C	THI74	Q04083	370 aa		4.08	□□□□□ -1.76
SYN8	YAL014C	SYM1	Q06563	197 aa		4.08	□□□□□ -1.76
SYN8	YAL014C	TFB5	Q3E7C1	72 aa	Predicted RBP	4.08	□□□□□ -1.76
SYN8	YAL014C	CYC3	P06182	269 aa		4.07	□□□□□ -1.76
SYN8	YAL014C	URA5	P13298	226 aa	Known RBP	4.07	□□□□□ -1.76
SYN8	YAL014C	PAN3	P36102	679 aa	Predicted RBP	4.07	□□□□□ -1.76
SYN8	YAL014C	RRT1	P38192	103 aa		4.07	□□□□□ -1.76
SYN8	YAL014C	HPA3	P39979	161 aa		4.07	□□□□□ -1.76
SYN8	YAL014C	ARO8	P53090	500 aa	Known RBP	4.07	□□□□□ -1.76
SYN8	YAL014C	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
SYN8	YAL014C	TMA20	P89886	181 aa	Predicted RBP	4.07	□□□□□ -1.76
SYN8	YAL014C	RAD28	Q12021	506 aa		4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 190.7 ms