RNA–Protein interactions for RNA: ENST00000618148.1

VPS45-213, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,670 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-213ENST00000618148 POLIQ9UNA4 740 aa8□□□□□ -1.13
VPS45-213ENST00000618148 BZW2Q9Y6E2 419 aaKnown RBP8□□□□□ -1.13
VPS45-213ENST00000618148 TSC2P49815 1807 aa7.99□□□□□ -1.13
VPS45-213ENST00000618148 TBKBP1A7MCY6 615 aa7.99□□□□□ -1.13
VPS45-213ENST00000618148 GABRDO14764 452 aa7.99□□□□□ -1.13
VPS45-213ENST00000618148 B3GAT3O94766 335 aa7.99□□□□□ -1.13
VPS45-213ENST00000618148 GFPT2O94808 682 aa7.99□□□□□ -1.13
VPS45-213ENST00000618148 KIF4AO95239 1232 aa7.99□□□□□ -1.13
VPS45-213ENST00000618148 CYP11A1P05108 521 aa7.99□□□□□ -1.13
VPS45-213ENST00000618148 SERPING1P05155 500 aa7.99□□□□□ -1.13
VPS45-213ENST00000618148 PTMAP06454 111 aaKnown RBP7.99□□□□□ -1.13
VPS45-213ENST00000618148 LINC00271P0C7V0 271 aa7.99□□□□□ -1.13
VPS45-213ENST00000618148 CCDC172P0C7W6 258 aa7.99□□□□□ -1.13
VPS45-213ENST00000618148 PNMA6AP0CW24 399 aaPredicted RBP7.99□□□□□ -1.13
VPS45-213ENST00000618148 SYN1P17600 705 aa7.99□□□□□ -1.13
VPS45-213ENST00000618148 IGFBP6P24592 240 aaPredicted RBP7.99□□□□□ -1.13
VPS45-213ENST00000618148 CLCN1P35523 988 aa7.99□□□□□ -1.13
VPS45-213ENST00000618148 TNNC1P63316 161 aa7.99□□□□□ -1.13
VPS45-213ENST00000618148 KCNC4Q03721 635 aa7.99□□□□□ -1.13
VPS45-213ENST00000618148 TMTC1Q8IUR5 882 aa7.99□□□□□ -1.13
VPS45-213ENST00000618148 EPS8L1Q8TE68 723 aa7.99□□□□□ -1.13
VPS45-213ENST00000618148 WHAMMQ8TF30 809 aa7.99□□□□□ -1.13
VPS45-213ENST00000618148 BAG1Q99933 345 aaPredicted RBP7.99□□□□□ -1.13
VPS45-213ENST00000618148 LBHD1Q9BQE6 289 aaPredicted RBP7.99□□□□□ -1.13
VPS45-213ENST00000618148 CWH43Q9H720 699 aa7.99□□□□□ -1.13
VPS45-213ENST00000618148 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.99□□□□□ -1.13
VPS45-213ENST00000618148 ARHGAP20Q9P2F6 1191 aa7.99□□□□□ -1.13
VPS45-213ENST00000618148 CACNG4Q9UBN1 327 aa7.99□□□□□ -1.13
VPS45-213ENST00000618148 NXF1Q9UBU9 619 aaKnown RBP7.99□□□□□ -1.13
VPS45-213ENST00000618148 DNAJB4Q9UDY4 337 aa7.99□□□□□ -1.13
VPS45-213ENST00000618148 NOCTQ9UK39 431 aaKnown RBP7.99□□□□□ -1.13
VPS45-213ENST00000618148 BARX2Q9UMQ3 279 aaPredicted RBP7.99□□□□□ -1.13
VPS45-213ENST00000618148 L1RE1Q9UN81 338 aa7.99□□□□□ -1.13
VPS45-213ENST00000618148 R3HCC1Q9Y3T6 440 aaKnown RBP7.99□□□□□ -1.13
VPS45-213ENST00000618148 SNX9Q9Y5X1 595 aa7.99□□□□□ -1.13
VPS45-213ENST00000618148 ARHGAP6O43182 974 aa7.98□□□□□ -1.13
VPS45-213ENST00000618148 ITGB1P05556 798 aa7.98□□□□□ -1.13
VPS45-213ENST00000618148 GALTP07902 379 aa7.98□□□□□ -1.13
VPS45-213ENST00000618148 PAEPP09466 180 aa7.98□□□□□ -1.13
VPS45-213ENST00000618148 WEE2P0C1S8 567 aa7.98□□□□□ -1.13
VPS45-213ENST00000618148 TYMPP19971 482 aa7.98□□□□□ -1.13
VPS45-213ENST00000618148 WARSP23381 471 aaKnown RBP7.98□□□□□ -1.13
VPS45-213ENST00000618148 MAGEA10P43363 369 aaPredicted RBP7.98□□□□□ -1.13
VPS45-213ENST00000618148 SLC11A1P49279 550 aa7.98□□□□□ -1.13
VPS45-213ENST00000618148 BPIFB4P59827 614 aa7.98□□□□□ -1.13
VPS45-213ENST00000618148 PTK2Q05397 1052 aa7.98□□□□□ -1.13
VPS45-213ENST00000618148 RNASELQ05823 741 aaKnown RBP7.98□□□□□ -1.13
VPS45-213ENST00000618148 ASIC2Q16515 512 aa7.98□□□□□ -1.13
VPS45-213ENST00000618148 ARHGAP44Q17R89 818 aa7.98□□□□□ -1.13
VPS45-213ENST00000618148 TSR1Q2NL82 804 aaKnown RBP7.98□□□□□ -1.13
VPS45-213ENST00000618148 TIGD5Q53EQ6 642 aa7.98□□□□□ -1.13
VPS45-213ENST00000618148 CYP26C1Q6V0L0 522 aa7.98□□□□□ -1.13
VPS45-213ENST00000618148 UNC93AQ86WB7 457 aa7.98□□□□□ -1.13
VPS45-213ENST00000618148 HERC6Q8IVU3 1022 aa7.98□□□□□ -1.13
VPS45-213ENST00000618148 CCDC170Q8IYT3 715 aa7.98□□□□□ -1.13
VPS45-213ENST00000618148 RNF168Q8IYW5 571 aaPredicted RBP7.98□□□□□ -1.13
VPS45-213ENST00000618148 TMEM86AQ8N2M4 240 aa7.98□□□□□ -1.13
VPS45-213ENST00000618148 PDCL2Q8N4E4 241 aa7.98□□□□□ -1.13
VPS45-213ENST00000618148 RBBP8NLQ8NC74 664 aaPredicted RBP7.98□□□□□ -1.13
VPS45-213ENST00000618148 DDX1Q92499 740 aaKnown RBP7.98□□□□□ -1.13
VPS45-213ENST00000618148 DPF3Q92784 378 aa7.98□□□□□ -1.13
VPS45-213ENST00000618148 ZDHHC16Q969W1 377 aa7.98□□□□□ -1.13
VPS45-213ENST00000618148 SENP8Q96LD8 212 aa7.98□□□□□ -1.13
VPS45-213ENST00000618148 CHP1Q99653 195 aa7.98□□□□□ -1.13
VPS45-213ENST00000618148 MTIF3Q9H2K0 278 aaKnown RBP7.98□□□□□ -1.13
VPS45-213ENST00000618148 ZNHIT6Q9NWK9 470 aaKnown RBP7.98□□□□□ -1.13
VPS45-213ENST00000618148 MARCH5Q9NX47 278 aa7.98□□□□□ -1.13
VPS45-213ENST00000618148 DSEQ9UL01 958 aa7.98□□□□□ -1.13
VPS45-213ENST00000618148 NENFQ9UMX5 172 aa7.98□□□□□ -1.13
VPS45-213ENST00000618148 NME7Q9Y5B8 376 aa7.98□□□□□ -1.13
VPS45-213ENST00000618148 ARHGEF37A1IGU5 675 aa7.98□□□□□ -1.13
VPS45-213ENST00000618148 TULP1O00294 542 aaPredicted RBP7.98□□□□□ -1.13
VPS45-213ENST00000618148 NRP1O14786 923 aa7.98□□□□□ -1.13
VPS45-213ENST00000618148 CYP26A1O43174 497 aa7.98□□□□□ -1.13
VPS45-213ENST00000618148 HUS1O60921 280 aa7.98□□□□□ -1.13
VPS45-213ENST00000618148 LCA5LO95447 670 aa7.98□□□□□ -1.13
VPS45-213ENST00000618148 SKILP12757 684 aa7.98□□□□□ -1.13
VPS45-213ENST00000618148 CYP11B1P15538 503 aa7.98□□□□□ -1.13
VPS45-213ENST00000618148 RGS19P49795 217 aa7.98□□□□□ -1.13
VPS45-213ENST00000618148 RAD23BP54727 409 aa7.98□□□□□ -1.13
VPS45-213ENST00000618148 CDH8P55286 799 aa7.98□□□□□ -1.13
VPS45-213ENST00000618148 BCAR1P56945 870 aa7.98□□□□□ -1.13
VPS45-213ENST00000618148 KLHL30Q0D2K2 578 aa7.98□□□□□ -1.13
VPS45-213ENST00000618148 TMEM270Q6UE05 265 aa7.98□□□□□ -1.13
VPS45-213ENST00000618148 SCARA5Q6ZMJ2 495 aa7.98□□□□□ -1.13
VPS45-213ENST00000618148 ZNF571Q7Z3V5 609 aaPredicted RBP7.98□□□□□ -1.13
VPS45-213ENST00000618148 ZNF677Q86XU0 584 aa7.98□□□□□ -1.13
VPS45-213ENST00000618148 ADGRF2Q8IZF7 708 aa7.98□□□□□ -1.13
VPS45-213ENST00000618148 CRYBG2Q8N1P7 616 aa7.98□□□□□ -1.13
VPS45-213ENST00000618148 APPL2Q8NEU8 664 aa7.98□□□□□ -1.13
VPS45-213ENST00000618148 SLC30A5Q8TAD4 765 aa7.98□□□□□ -1.13
VPS45-213ENST00000618148 CLP1Q92989 425 aaKnown RBP7.98□□□□□ -1.13
VPS45-213ENST00000618148 GDF15Q99988 308 aa7.98□□□□□ -1.13
VPS45-213ENST00000618148 MRPL45Q9BRJ2 306 aaKnown RBP7.98□□□□□ -1.13
VPS45-213ENST00000618148 HMGXB4Q9UGU5 601 aa7.98□□□□□ -1.13
VPS45-213ENST00000618148 RABGEF1Q9UJ41 708 aa7.98□□□□□ -1.13
VPS45-213ENST00000618148 ADAM28Q9UKQ2 775 aa7.98□□□□□ -1.13
VPS45-213ENST00000618148 STXBP5LQ9Y2K9 1186 aa7.98□□□□□ -1.13
VPS45-213ENST00000618148 INSL6Q9Y581 213 aa7.98□□□□□ -1.13
VPS45-213ENST00000618148 PCDHB4Q9Y5E5 795 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms