RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 KCNG4Q8TDN1 519 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 POP1Q99575 1024 aaKnown RBP5.37□□□□□ -1.55
SYCP1-209ENST00000613524 ARPC5LQ9BPX5 153 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 OXCT2Q9BYC2 517 aaPredicted RBP5.37□□□□□ -1.55
SYCP1-209ENST00000613524 PRO3102Q9H379 93 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 TBC1D13Q9NVG8 400 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 PRKAG3Q9UGI9 489 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 SALL4Q9UJQ4 1053 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 PCDHB12Q9Y5F1 795 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 KNL1Q8NG31 2342 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 MYO10Q9HD67 2058 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 LAMA1P25391 3075 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 C9IYK1 514 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 PDPK1O15530 556 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 TADA2AO75478 443 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 FGF18O76093 207 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 TPM3P06753 285 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 ATF7P17544 494 aaPredicted RBP5.37□□□□□ -1.55
SYCP1-209ENST00000613524 BMP8BP34820 402 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 ARL2P36404 184 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 SOX9P48436 509 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 GIT2Q14161 759 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 PDIA5Q14554 519 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 NOMO2Q5JPE7 1267 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 SCARA5Q6ZMJ2 495 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 JAKMIP2Q96AA8 810 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 RPGRIP1Q96KN7 1286 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 CEP89Q96ST8 783 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 CBWD1Q9BRT8 395 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 PDZD7Q9H5P4 517 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 TLE6Q9H808 572 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 CBX8Q9HC52 389 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 ABCB6Q9NP58 842 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 AGPAT5Q9NUQ2 364 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 GBF1Q92538 1859 aa5.37□□□□□ -1.55
SYCP1-209ENST00000613524 TRIP11Q15643 1979 aa5.36□□□□□ -1.55
SYCP1-209ENST00000613524 MUC6Q6W4X9 2439 aa5.36□□□□□ -1.55
SYCP1-209ENST00000613524 CACNA1HO95180 2353 aa5.36□□□□□ -1.55
SYCP1-209ENST00000613524 DGKIO75912 1065 aa5.36□□□□□ -1.55
SYCP1-209ENST00000613524 CXCL10P02778 98 aa5.36□□□□□ -1.55
SYCP1-209ENST00000613524 OR4Q2P0C623 313 aa5.36□□□□□ -1.55
SYCP1-209ENST00000613524 SLC11A1P49279 550 aa5.36□□□□□ -1.55
SYCP1-209ENST00000613524 SARSP49591 514 aaKnown RBP5.36□□□□□ -1.55
SYCP1-209ENST00000613524 YARSP54577 528 aaKnown RBP5.36□□□□□ -1.55
SYCP1-209ENST00000613524 LSM11P83369 360 aaKnown RBP eCLIP5.36□□□□□ -1.55
SYCP1-209ENST00000613524 DMTNQ08495 405 aa5.36□□□□□ -1.55
SYCP1-209ENST00000613524 MAPK7Q13164 816 aa5.36□□□□□ -1.55
SYCP1-209ENST00000613524 NT5DC1Q5TFE4 455 aa5.36□□□□□ -1.55
SYCP1-209ENST00000613524 TCERG1LQ5VWI1 586 aa5.36□□□□□ -1.55
SYCP1-209ENST00000613524 CCDC116Q8IYX3 515 aa5.36□□□□□ -1.55
SYCP1-209ENST00000613524 SYT2Q8N9I0 419 aaPredicted RBP5.36□□□□□ -1.55
SYCP1-209ENST00000613524 VPS37AQ8NEZ2 397 aa5.36□□□□□ -1.55
SYCP1-209ENST00000613524 URGCPQ8TCY9 931 aa5.36□□□□□ -1.55
SYCP1-209ENST00000613524 NEK9Q8TD19 979 aa5.36□□□□□ -1.55
SYCP1-209ENST00000613524 BCL7CQ8WUZ0 217 aaPredicted RBP5.36□□□□□ -1.55
SYCP1-209ENST00000613524 KIFAP3Q92845 792 aa5.36□□□□□ -1.55
SYCP1-209ENST00000613524 ZCCHC2Q9C0B9 1178 aaKnown RBP5.36□□□□□ -1.55
SYCP1-209ENST00000613524 NUP62CLQ9H1M0 184 aa5.36□□□□□ -1.55
SYCP1-209ENST00000613524 NRDE2Q9H7Z3 1164 aa5.36□□□□□ -1.55
SYCP1-209ENST00000613524 TOPORSQ9NS56 1045 aaPredicted RBP5.36□□□□□ -1.55
SYCP1-209ENST00000613524 EXOC1Q9NV70 894 aa5.36□□□□□ -1.55
SYCP1-209ENST00000613524 TUBGCP4Q9UGJ1 667 aa5.36□□□□□ -1.55
SYCP1-209ENST00000613524 ATG2BQ96BY7 2078 aa5.36□□□□□ -1.55
SYCP1-209ENST00000613524 COL1A2P08123 1366 aa5.36□□□□□ -1.55
SYCP1-209ENST00000613524 MYH11P35749 1972 aa5.36□□□□□ -1.55
SYCP1-209ENST00000613524 A0A0U1RQF3 1178 aa5.36□□□□□ -1.55
SYCP1-209ENST00000613524 LAD1O00515 517 aa5.36□□□□□ -1.55
SYCP1-209ENST00000613524 PPEF2O14830 753 aa5.36□□□□□ -1.55
SYCP1-209ENST00000613524 SH3BP5O60239 455 aa5.36□□□□□ -1.55
SYCP1-209ENST00000613524 CXCL14O95715 111 aa5.36□□□□□ -1.55
SYCP1-209ENST00000613524 BMP15O95972 392 aa5.36□□□□□ -1.55
SYCP1-209ENST00000613524 LDHAP00338 332 aaKnown RBP5.36□□□□□ -1.55
SYCP1-209ENST00000613524 PFKMP08237 780 aa5.36□□□□□ -1.55
SYCP1-209ENST00000613524 PLS3P13797 630 aa5.36□□□□□ -1.55
SYCP1-209ENST00000613524 HOXC8P31273 242 aa5.36□□□□□ -1.55
SYCP1-209ENST00000613524 RFC2P35250 354 aa5.36□□□□□ -1.55
SYCP1-209ENST00000613524 CLCNKBP51801 687 aa5.36□□□□□ -1.55
SYCP1-209ENST00000613524 NKX3-2P78367 333 aa5.36□□□□□ -1.55
SYCP1-209ENST00000613524 CLCQ05315 142 aa5.36□□□□□ -1.55
SYCP1-209ENST00000613524 LRMPQ12912 555 aa5.36□□□□□ -1.55
SYCP1-209ENST00000613524 COASYQ13057 564 aa5.36□□□□□ -1.55
SYCP1-209ENST00000613524 PPP2R5AQ15172 486 aa5.36□□□□□ -1.55
SYCP1-209ENST00000613524 PTPN21Q16825 1174 aa5.36□□□□□ -1.55
SYCP1-209ENST00000613524 SNAP47Q5SQN1 464 aa5.36□□□□□ -1.55
SYCP1-209ENST00000613524 FAM171A1Q5VUB5 890 aa5.36□□□□□ -1.55
SYCP1-209ENST00000613524 ARL6IP4Q66PJ3 421 aaKnown RBP5.36□□□□□ -1.55
SYCP1-209ENST00000613524 ARMCX5Q6P1M9 558 aa5.36□□□□□ -1.55
SYCP1-209ENST00000613524 SLC27A1Q6PCB7 646 aa5.36□□□□□ -1.55
SYCP1-209ENST00000613524 SMG8Q8ND04 991 aaKnown RBP5.36□□□□□ -1.55
SYCP1-209ENST00000613524 RIN2Q8WYP3 895 aaPredicted RBP5.36□□□□□ -1.55
SYCP1-209ENST00000613524 MRPS27Q92552 414 aaKnown RBP5.36□□□□□ -1.55
SYCP1-209ENST00000613524 ZNF558Q96NG5 402 aa5.36□□□□□ -1.55
SYCP1-209ENST00000613524 FTHL17Q9BXU8 183 aa5.36□□□□□ -1.55
SYCP1-209ENST00000613524 MRPL4Q9BYD3 311 aaKnown RBP5.36□□□□□ -1.55
SYCP1-209ENST00000613524 CDT1Q9H211 546 aa5.36□□□□□ -1.55
SYCP1-209ENST00000613524 CLSTN2Q9H4D0 955 aa5.36□□□□□ -1.55
SYCP1-209ENST00000613524 PCDHA11Q9Y5I1 949 aa5.36□□□□□ -1.55
SYCP1-209ENST00000613524 LPXNO60711 386 aa5.35□□□□□ -1.55
SYCP1-209ENST00000613524 KINO60870 393 aaKnown RBP5.35□□□□□ -1.55
SYCP1-209ENST00000613524 CUTAO60888 179 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms