RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 RNF214Q8ND24 703 aa12.2□□□□□ -0.46
NUP50-216ENST00000486184 OR6B3Q8NGW1 331 aa12.2□□□□□ -0.46
NUP50-216ENST00000486184 LNX1Q8TBB1 728 aaPredicted RBP12.2□□□□□ -0.46
NUP50-216ENST00000486184 SPATA18Q8TC71 538 aa12.2□□□□□ -0.46
NUP50-216ENST00000486184 SEMA4DQ92854 862 aa12.2□□□□□ -0.46
NUP50-216ENST00000486184 PCMTD1Q96MG8 357 aaPredicted RBP12.2□□□□□ -0.46
NUP50-216ENST00000486184 INTS2Q9H0H0 1204 aaKnown RBP12.2□□□□□ -0.46
NUP50-216ENST00000486184 XYLT2Q9H1B5 865 aa12.2□□□□□ -0.46
NUP50-216ENST00000486184 TLE6Q9H808 572 aa12.2□□□□□ -0.46
NUP50-216ENST00000486184 MTMR10Q9NXD2 777 aa12.2□□□□□ -0.46
NUP50-216ENST00000486184 FNIP2Q9P278 1114 aa12.2□□□□□ -0.46
NUP50-216ENST00000486184 MTRRQ9UBK8 725 aa12.2□□□□□ -0.46
NUP50-216ENST00000486184 L1RE1Q9UN81 338 aa12.2□□□□□ -0.46
NUP50-216ENST00000486184 POLIQ9UNA4 740 aa12.2□□□□□ -0.46
NUP50-216ENST00000486184 COQ4Q9Y3A0 265 aa12.2□□□□□ -0.46
NUP50-216ENST00000486184 PCDHGC5Q9Y5F6 944 aa12.2□□□□□ -0.46
NUP50-216ENST00000486184 IRAK3Q9Y616 596 aa12.2□□□□□ -0.46
NUP50-216ENST00000486184 MTCH2Q9Y6C9 303 aa12.2□□□□□ -0.46
NUP50-216ENST00000486184 OR6C75A6NL08 312 aa12.19□□□□□ -0.46
NUP50-216ENST00000486184 HIDE1A8MVS5 230 aa12.19□□□□□ -0.46
NUP50-216ENST00000486184 OAZ2O95190 189 aa12.19□□□□□ -0.46
NUP50-216ENST00000486184 ATP1A3P13637 1013 aa12.19□□□□□ -0.46
NUP50-216ENST00000486184 CPB1P15086 417 aa12.19□□□□□ -0.46
NUP50-216ENST00000486184 RPL17P18621 184 aaKnown RBP12.19□□□□□ -0.46
NUP50-216ENST00000486184 POU3F3P20264 500 aaPredicted RBP12.19□□□□□ -0.46
NUP50-216ENST00000486184 TBXAS1P24557 533 aaPredicted RBP12.19□□□□□ -0.46
NUP50-216ENST00000486184 PCSK1P29120 753 aa12.19□□□□□ -0.46
NUP50-216ENST00000486184 NRIP1P48552 1158 aa12.19□□□□□ -0.46
NUP50-216ENST00000486184 ARPP19P56211 112 aa12.19□□□□□ -0.46
NUP50-216ENST00000486184 TSPY1Q01534 308 aa12.19□□□□□ -0.46
NUP50-216ENST00000486184 ADGRE1Q14246 886 aa12.19□□□□□ -0.46
NUP50-216ENST00000486184 EXOC3L4Q17RC7 722 aa12.19□□□□□ -0.46
NUP50-216ENST00000486184 SOWAHAQ2M3V2 549 aa12.19□□□□□ -0.46
NUP50-216ENST00000486184 MIIPQ5JXC2 388 aa12.19□□□□□ -0.46
NUP50-216ENST00000486184 ELMSAN1Q6PJG2 1045 aa12.19□□□□□ -0.46
NUP50-216ENST00000486184 PPFIBP1Q86W92 1011 aa12.19□□□□□ -0.46
NUP50-216ENST00000486184 PPM1KQ8N3J5 372 aa12.19□□□□□ -0.46
NUP50-216ENST00000486184 TTC39CQ8N584 583 aa12.19□□□□□ -0.46
NUP50-216ENST00000486184 EHBP1Q8NDI1 1231 aa12.19□□□□□ -0.46
NUP50-216ENST00000486184 FAXDC2Q96IV6 333 aa12.19□□□□□ -0.46
NUP50-216ENST00000486184 GUCD1Q96NT3 240 aa12.19□□□□□ -0.46
NUP50-216ENST00000486184 CDCA3Q99618 268 aaPredicted RBP12.19□□□□□ -0.46
NUP50-216ENST00000486184 CRACR2AQ9BSW2 395 aa12.19□□□□□ -0.46
NUP50-216ENST00000486184 IGFLR1Q9H665 355 aa12.19□□□□□ -0.46
NUP50-216ENST00000486184 SMYD3Q9H7B4 428 aa12.19□□□□□ -0.46
NUP50-216ENST00000486184 DDX43Q9NXZ2 648 aaKnown RBP12.19□□□□□ -0.46
NUP50-216ENST00000486184 FBXL5Q9UKA1 691 aa12.19□□□□□ -0.46
NUP50-216ENST00000486184 BACE2Q9Y5Z0 518 aa12.19□□□□□ -0.46
NUP50-216ENST00000486184 CDY1Q9Y6F8 540 aa12.19□□□□□ -0.46
NUP50-216ENST00000486184 LGALS16A8MUM7 142 aa12.18□□□□□ -0.46
NUP50-216ENST00000486184 A8MXQ7 604 aa12.18□□□□□ -0.46
NUP50-216ENST00000486184 TEX28O15482 410 aa12.18□□□□□ -0.46
NUP50-216ENST00000486184 MAP3K13O43283 966 aa12.18□□□□□ -0.46
NUP50-216ENST00000486184 TACC1O75410 805 aa12.18□□□□□ -0.46
NUP50-216ENST00000486184 TPM3P06753 285 aa12.18□□□□□ -0.46
NUP50-216ENST00000486184 CNPP09543 421 aaKnown RBP12.18□□□□□ -0.46
NUP50-216ENST00000486184 FAM163BP0C2L3 166 aa12.18□□□□□ -0.46
NUP50-216ENST00000486184 CD58P19256 250 aa12.18□□□□□ -0.46
NUP50-216ENST00000486184 WARSP23381 471 aaKnown RBP12.18□□□□□ -0.46
NUP50-216ENST00000486184 OR1D2P34982 312 aa12.18□□□□□ -0.46
NUP50-216ENST00000486184 GNL1P36915 607 aaPredicted RBP12.18□□□□□ -0.46
NUP50-216ENST00000486184 ASPAP45381 313 aa12.18□□□□□ -0.46
NUP50-216ENST00000486184 RAP1GAPP47736 663 aa12.18□□□□□ -0.46
NUP50-216ENST00000486184 UBXN1Q04323 297 aa12.18□□□□□ -0.46
NUP50-216ENST00000486184 TCEAL5Q5H9L2 206 aa12.18□□□□□ -0.46
NUP50-216ENST00000486184 TRIM65Q6PJ69 517 aa12.18□□□□□ -0.46
NUP50-216ENST00000486184 ADGRD2Q7Z7M1 963 aa12.18□□□□□ -0.46
NUP50-216ENST00000486184 DCP1BQ8IZD4 617 aaKnown RBP12.18□□□□□ -0.46
NUP50-216ENST00000486184 ELMO3Q96BJ8 720 aa12.18□□□□□ -0.46
NUP50-216ENST00000486184 FAM81BQ96LP2 452 aa12.18□□□□□ -0.46
NUP50-216ENST00000486184 KLHL5Q96PQ7 755 aa12.18□□□□□ -0.46
NUP50-216ENST00000486184 HSD3B7Q9H2F3 369 aa12.18□□□□□ -0.46
NUP50-216ENST00000486184 CYP3A43Q9HB55 503 aa12.18□□□□□ -0.46
NUP50-216ENST00000486184 RXFP1Q9HBX9 757 aa12.18□□□□□ -0.46
NUP50-216ENST00000486184 DPP7Q9UHL4 492 aa12.18□□□□□ -0.46
NUP50-216ENST00000486184 PRRC2BQ5JSZ5 2229 aaKnown RBP12.18□□□□□ -0.46
NUP50-216ENST00000486184 LAMA2P24043 3122 aaKnown RBP12.17□□□□□ -0.46
NUP50-216ENST00000486184 MYO7AQ13402 2215 aa12.17□□□□□ -0.46
NUP50-216ENST00000486184 TRANK1O15050 2925 aa12.17□□□□□ -0.46
NUP50-216ENST00000486184 PER2O15055 1255 aa12.17□□□□□ -0.46
NUP50-216ENST00000486184 NCK2O43639 380 aa12.17□□□□□ -0.46
NUP50-216ENST00000486184 GLUD1P00367 558 aa12.17□□□□□ -0.46
NUP50-216ENST00000486184 WEE2P0C1S8 567 aa12.17□□□□□ -0.46
NUP50-216ENST00000486184 MFAP3P55082 362 aa12.17□□□□□ -0.46
NUP50-216ENST00000486184 PLCB2Q00722 1185 aa12.17□□□□□ -0.46
NUP50-216ENST00000486184 CUL2Q13617 745 aa12.17□□□□□ -0.46
NUP50-216ENST00000486184 MRPL58Q14197 206 aaKnown RBP12.17□□□□□ -0.46
NUP50-216ENST00000486184 SKIV2LQ15477 1246 aaKnown RBP12.17□□□□□ -0.46
NUP50-216ENST00000486184 DUSP6Q16828 381 aa12.17□□□□□ -0.46
NUP50-216ENST00000486184 LLGL2Q6P1M3 1020 aa12.17□□□□□ -0.46
NUP50-216ENST00000486184 EP400NLQ6ZTU2 488 aa12.17□□□□□ -0.46
NUP50-216ENST00000486184 PALB2Q86YC2 1186 aa12.17□□□□□ -0.46
NUP50-216ENST00000486184 PPM1EQ8WY54 764 aa12.17□□□□□ -0.46
NUP50-216ENST00000486184 TATDN2Q93075 761 aa12.17□□□□□ -0.46
NUP50-216ENST00000486184 CLSTN3Q9BQT9 956 aa12.17□□□□□ -0.46
NUP50-216ENST00000486184 ACBD6Q9BR61 282 aa12.17□□□□□ -0.46
NUP50-216ENST00000486184 MRPL45Q9BRJ2 306 aaKnown RBP12.17□□□□□ -0.46
NUP50-216ENST00000486184 BCO2Q9BYV7 579 aa12.17□□□□□ -0.46
NUP50-216ENST00000486184 FAM124BQ9H5Z6 455 aaPredicted RBP12.17□□□□□ -0.46
NUP50-216ENST00000486184 APOBEC3GQ9HC16 384 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms