RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 STKLD1Q8NE28 680 aa13.74□□□□□ -0.21
GPC1-204ENST00000426280 PRSS33Q8NF86 280 aa13.74□□□□□ -0.21
GPC1-204ENST00000426280 CCDC127Q96BQ5 260 aa13.74□□□□□ -0.21
GPC1-204ENST00000426280 KXD1Q9BQD3 176 aa13.74□□□□□ -0.21
GPC1-204ENST00000426280 KCTD10Q9H3F6 313 aa13.74□□□□□ -0.21
GPC1-204ENST00000426280 ZNF334Q9HCZ1 680 aaPredicted RBP13.74□□□□□ -0.21
GPC1-204ENST00000426280 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.74□□□□□ -0.21
GPC1-204ENST00000426280 IGSF9Q9P2J2 1179 aa13.74□□□□□ -0.21
GPC1-204ENST00000426280 DUSP12Q9UNI6 340 aa13.74□□□□□ -0.21
GPC1-204ENST00000426280 MRPS23Q9Y3D9 190 aaKnown RBP13.74□□□□□ -0.21
GPC1-204ENST00000426280 YIPF1Q9Y548 306 aa13.74□□□□□ -0.21
GPC1-204ENST00000426280 NCANO14594 1321 aa13.73□□□□□ -0.21
GPC1-204ENST00000426280 GOLGA6L4A6NEF3 574 aa13.73□□□□□ -0.21
GPC1-204ENST00000426280 ATP2C2O75185 946 aa13.73□□□□□ -0.21
GPC1-204ENST00000426280 ZNF202O95125 648 aa13.73□□□□□ -0.21
GPC1-204ENST00000426280 RPN1P04843 607 aaKnown RBP13.73□□□□□ -0.21
GPC1-204ENST00000426280 KRT19P08727 400 aa13.73□□□□□ -0.21
GPC1-204ENST00000426280 MYL4P12829 197 aa13.73□□□□□ -0.21
GPC1-204ENST00000426280 ACAT1P24752 427 aaKnown RBP13.73□□□□□ -0.21
GPC1-204ENST00000426280 AVPR2P30518 371 aa13.73□□□□□ -0.21
GPC1-204ENST00000426280 GPR15P49685 360 aa13.73□□□□□ -0.21
GPC1-204ENST00000426280 GPC5P78333 572 aa13.73□□□□□ -0.21
GPC1-204ENST00000426280 CYP24A1Q07973 514 aa13.73□□□□□ -0.21
GPC1-204ENST00000426280 BFSP1Q12934 665 aa13.73□□□□□ -0.21
GPC1-204ENST00000426280 MYBPC2Q14324 1141 aa13.73□□□□□ -0.21
GPC1-204ENST00000426280 SNRNP35Q16560 246 aaKnown RBP13.73□□□□□ -0.21
GPC1-204ENST00000426280 SLC39A12Q504Y0 691 aa13.73□□□□□ -0.21
GPC1-204ENST00000426280 CWF19L1Q69YN2 538 aaKnown RBP13.73□□□□□ -0.21
GPC1-204ENST00000426280 TANGO2Q6ICL3 276 aa13.73□□□□□ -0.21
GPC1-204ENST00000426280 STXBP4Q6ZWJ1 553 aa13.73□□□□□ -0.21
GPC1-204ENST00000426280 RTL10Q7L3V2 364 aa13.73□□□□□ -0.21
GPC1-204ENST00000426280 TMC8Q8IU68 726 aa13.73□□□□□ -0.21
GPC1-204ENST00000426280 GPR152Q8TDT2 470 aa13.73□□□□□ -0.21
GPC1-204ENST00000426280 ERCC4Q92889 916 aaPredicted RBP13.73□□□□□ -0.21
GPC1-204ENST00000426280 MFSD14AQ96MC6 490 aa13.73□□□□□ -0.21
GPC1-204ENST00000426280 LPIN3Q9BQK8 851 aa13.73□□□□□ -0.21
GPC1-204ENST00000426280 AVENQ9NQS1 362 aaPredicted RBP13.73□□□□□ -0.21
GPC1-204ENST00000426280 DMAC2Q9NW81 257 aa13.73□□□□□ -0.21
GPC1-204ENST00000426280 MAPK8IP1Q9UQF2 711 aa13.73□□□□□ -0.21
GPC1-204ENST00000426280 DLATP10515 647 aaKnown RBP13.72□□□□□ -0.21
GPC1-204ENST00000426280 ATF6P18850 670 aa13.72□□□□□ -0.21
GPC1-204ENST00000426280 FCARP24071 287 aa13.72□□□□□ -0.21
GPC1-204ENST00000426280 LMO2P25791 158 aa13.72□□□□□ -0.21
GPC1-204ENST00000426280 DLG4P78352 724 aa13.72□□□□□ -0.21
GPC1-204ENST00000426280 RBP5P82980 135 aa13.72□□□□□ -0.21
GPC1-204ENST00000426280 SNW1Q13573 536 aaKnown RBP13.72□□□□□ -0.21
GPC1-204ENST00000426280 SOWAHAQ2M3V2 549 aa13.72□□□□□ -0.21
GPC1-204ENST00000426280 STXBP5Q5T5C0 1151 aa13.72□□□□□ -0.21
GPC1-204ENST00000426280 SDHAF4Q5VUM1 108 aa13.72□□□□□ -0.21
GPC1-204ENST00000426280 TRAPPC11Q7Z392 1133 aa13.72□□□□□ -0.21
GPC1-204ENST00000426280 LIMS2Q7Z4I7 341 aa13.72□□□□□ -0.21
GPC1-204ENST00000426280 C12orf56Q8IXR9 622 aa13.72□□□□□ -0.21
GPC1-204ENST00000426280 XXYLT1Q8NBI6 393 aa13.72□□□□□ -0.21
GPC1-204ENST00000426280 ENGASEQ8NFI3 743 aa13.72□□□□□ -0.21
GPC1-204ENST00000426280 CACTINQ8WUQ7 758 aaKnown RBP13.72□□□□□ -0.21
GPC1-204ENST00000426280 RSPRY1Q96DX4 576 aa13.72□□□□□ -0.21
GPC1-204ENST00000426280 PKMYT1Q99640 499 aa13.72□□□□□ -0.21
GPC1-204ENST00000426280 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.72□□□□□ -0.21
GPC1-204ENST00000426280 SNX9Q9Y5X1 595 aa13.72□□□□□ -0.21
GPC1-204ENST00000426280 UBE4BO95155 1302 aa13.71□□□□□ -0.21
GPC1-204ENST00000426280 KIAA0391O15091 583 aaKnown RBP13.71□□□□□ -0.21
GPC1-204ENST00000426280 PRPF40AO75400 957 aaKnown RBP13.71□□□□□ -0.21
GPC1-204ENST00000426280 TMEM191BP0C7N4 346 aa13.71□□□□□ -0.21
GPC1-204ENST00000426280 EPHA5P54756 1037 aa13.71□□□□□ -0.21
GPC1-204ENST00000426280 PSMD6Q15008 389 aa13.71□□□□□ -0.21
GPC1-204ENST00000426280 TEAD2Q15562 447 aa13.71□□□□□ -0.21
GPC1-204ENST00000426280 SV2CQ496J9 727 aa13.71□□□□□ -0.21
GPC1-204ENST00000426280 FAM78AQ5JUQ0 283 aa13.71□□□□□ -0.21
GPC1-204ENST00000426280 C1orf220Q5T0J3 134 aa13.71□□□□□ -0.21
GPC1-204ENST00000426280 DNAJB7Q7Z6W7 309 aaPredicted RBP13.71□□□□□ -0.21
GPC1-204ENST00000426280 FMR1NBQ8N0W7 255 aaPredicted RBP13.71□□□□□ -0.21
GPC1-204ENST00000426280 SIX5Q8N196 739 aa13.71□□□□□ -0.21
GPC1-204ENST00000426280 SHKBP1Q8TBC3 707 aa13.71□□□□□ -0.21
GPC1-204ENST00000426280 GIPC2Q8TF65 315 aa13.71□□□□□ -0.21
GPC1-204ENST00000426280 KBTBD7Q8WVZ9 684 aa13.71□□□□□ -0.21
GPC1-204ENST00000426280 ZNF512Q96ME7 567 aaPredicted RBP13.71□□□□□ -0.21
GPC1-204ENST00000426280 PHOX2BQ99453 314 aa13.71□□□□□ -0.21
GPC1-204ENST00000426280 CGRRF1Q99675 332 aa13.71□□□□□ -0.21
GPC1-204ENST00000426280 MKNK1Q9BUB5 465 aa13.71□□□□□ -0.21
GPC1-204ENST00000426280 EXOC1Q9NV70 894 aa13.71□□□□□ -0.21
GPC1-204ENST00000426280 GDAP2Q9NXN4 497 aa13.71□□□□□ -0.21
GPC1-204ENST00000426280 DDX43Q9NXZ2 648 aaKnown RBP13.71□□□□□ -0.21
GPC1-204ENST00000426280 USP25Q9UHP3 1055 aa13.71□□□□□ -0.21
GPC1-204ENST00000426280 ITGA11Q9UKX5 1188 aa13.71□□□□□ -0.21
GPC1-204ENST00000426280 CA14Q9ULX7 337 aa13.71□□□□□ -0.21
GPC1-204ENST00000426280 KMT2EQ8IZD2 1858 aa13.71□□□□□ -0.21
GPC1-204ENST00000426280 A0A1W2PRU2 124 aa13.7□□□□□ -0.22
GPC1-204ENST00000426280 MYBPHLA2RUH7 354 aa13.7□□□□□ -0.22
GPC1-204ENST00000426280 SHISA7A6NL88 538 aa13.7□□□□□ -0.22
GPC1-204ENST00000426280 GABRDO14764 452 aa13.7□□□□□ -0.22
GPC1-204ENST00000426280 LRRN2O75325 713 aa13.7□□□□□ -0.22
GPC1-204ENST00000426280 RHOBTB3O94955 611 aa13.7□□□□□ -0.22
GPC1-204ENST00000426280 HAPLN1P10915 354 aaPredicted RBP13.7□□□□□ -0.22
GPC1-204ENST00000426280 SRFP11831 508 aa13.7□□□□□ -0.22
GPC1-204ENST00000426280 PAX3P23760 479 aa13.7□□□□□ -0.22
GPC1-204ENST00000426280 VIPR2P41587 438 aa13.7□□□□□ -0.22
GPC1-204ENST00000426280 TCF15Q12870 199 aa13.7□□□□□ -0.22
GPC1-204ENST00000426280 PSMD2Q13200 908 aa13.7□□□□□ -0.22
GPC1-204ENST00000426280 PNOCQ13519 176 aa13.7□□□□□ -0.22
GPC1-204ENST00000426280 DUOXA2Q1HG44 320 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms