RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 RTP3Q9BQQ7 232 aa32.77■■■□□ 2.84
CSNK1E-206ENST00000413574 NSUN3Q9H649 340 aaKnown RBP32.77■■■□□ 2.84
CSNK1E-206ENST00000413574 RXFP1Q9HBX9 757 aa32.77■■■□□ 2.84
CSNK1E-206ENST00000413574 MTRRQ9UBK8 725 aa32.77■■■□□ 2.84
CSNK1E-206ENST00000413574 ARHGEF37A1IGU5 675 aa32.77■■■□□ 2.84
CSNK1E-206ENST00000413574 FOSL2P15408 326 aa32.77■■■□□ 2.84
CSNK1E-206ENST00000413574 GTF2F1P35269 517 aaKnown RBP eCLIP32.77■■■□□ 2.842e-9■■■■■ 41.8
CSNK1E-206ENST00000413574 TPM4P67936 248 aa32.77■■■□□ 2.84
CSNK1E-206ENST00000413574 APBA1Q02410 837 aa32.77■■■□□ 2.84
CSNK1E-206ENST00000413574 GBP6Q6ZN66 633 aa32.77■■■□□ 2.84
CSNK1E-206ENST00000413574 DPH6Q7L8W6 267 aa32.77■■■□□ 2.84
CSNK1E-206ENST00000413574 FBXL5Q9UKA1 691 aa32.77■■■□□ 2.84
CSNK1E-206ENST00000413574 CDY1Q9Y6F8 540 aa32.77■■■□□ 2.84
CSNK1E-206ENST00000413574 PLXNA3P51805 1871 aa32.76■■■□□ 2.84
CSNK1E-206ENST00000413574 TBC1D4O60343 1298 aa32.76■■■□□ 2.83
CSNK1E-206ENST00000413574 WEE2P0C1S8 567 aa32.76■■■□□ 2.83
CSNK1E-206ENST00000413574 NRIP1P48552 1158 aa32.76■■■□□ 2.83
CSNK1E-206ENST00000413574 ZNF280DQ6N043 979 aa32.76■■■□□ 2.83
CSNK1E-206ENST00000413574 ARID3AQ99856 593 aa32.76■■■□□ 2.83
CSNK1E-206ENST00000413574 NIF3L1Q9GZT8 377 aa32.76■■■□□ 2.83
CSNK1E-206ENST00000413574 TLE6Q9H808 572 aa32.76■■■□□ 2.83
CSNK1E-206ENST00000413574 NME7Q9Y5B8 376 aa32.76■■■□□ 2.83
CSNK1E-206ENST00000413574 PRUNE2Q8WUY3 3088 aa32.76■■■□□ 2.83
CSNK1E-206ENST00000413574 H7C4K7 107 aa32.75■■■□□ 2.83
CSNK1E-206ENST00000413574 TPM2P07951 284 aa32.75■■■□□ 2.83
CSNK1E-206ENST00000413574 PDXDC1Q6P996 788 aa32.75■■■□□ 2.83
CSNK1E-206ENST00000413574 GPR65Q8IYL9 337 aa32.75■■■□□ 2.83
CSNK1E-206ENST00000413574 TMEM86AQ8N2M4 240 aa32.75■■■□□ 2.83
CSNK1E-206ENST00000413574 OR10T2Q8NGX3 314 aa32.75■■■□□ 2.83
CSNK1E-206ENST00000413574 TMEM209Q96SK2 561 aa32.75■■■□□ 2.83
CSNK1E-206ENST00000413574 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP32.75■■■□□ 2.83
CSNK1E-206ENST00000413574 FNIP2Q9P278 1114 aa32.75■■■□□ 2.83
CSNK1E-206ENST00000413574 BACE2Q9Y5Z0 518 aa32.75■■■□□ 2.83
CSNK1E-206ENST00000413574 GTPBP10A4D1E9 387 aaKnown RBP32.74■■■□□ 2.83
CSNK1E-206ENST00000413574 P4HA1P13674 534 aa32.74■■■□□ 2.83
CSNK1E-206ENST00000413574 OR1D2P34982 312 aa32.74■■■□□ 2.83
CSNK1E-206ENST00000413574 ARPP19P56211 112 aa32.74■■■□□ 2.83
CSNK1E-206ENST00000413574 EXOC3L4Q17RC7 722 aa32.74■■■□□ 2.83
CSNK1E-206ENST00000413574 ARHGEF19Q8IW93 802 aa32.74■■■□□ 2.83
CSNK1E-206ENST00000413574 EMILIN2Q9BXX0 1053 aa32.74■■■□□ 2.83
CSNK1E-206ENST00000413574 BCO2Q9BYV7 579 aa32.74■■■□□ 2.83
CSNK1E-206ENST00000413574 IGFLR1Q9H665 355 aa32.74■■■□□ 2.83
CSNK1E-206ENST00000413574 DDX43Q9NXZ2 648 aaKnown RBP32.74■■■□□ 2.83
CSNK1E-206ENST00000413574 XIRP2A4UGR9 3374 aa32.74■■■□□ 2.83
CSNK1E-206ENST00000413574 CLASP2O75122 1294 aaKnown RBP32.73■■■□□ 2.83
CSNK1E-206ENST00000413574 OR4Q2P0C623 313 aa32.73■■■□□ 2.83
CSNK1E-206ENST00000413574 ACAT1P24752 427 aaKnown RBP32.73■■■□□ 2.83
CSNK1E-206ENST00000413574 LMO2P25791 158 aa32.73■■■□□ 2.83
CSNK1E-206ENST00000413574 PON1P27169 355 aa32.73■■■□□ 2.83
CSNK1E-206ENST00000413574 CDR1P51861 262 aa32.73■■■□□ 2.83
CSNK1E-206ENST00000413574 KCNMA1Q12791 1236 aa32.73■■■□□ 2.83
CSNK1E-206ENST00000413574 PALB2Q86YC2 1186 aa32.73■■■□□ 2.83
CSNK1E-206ENST00000413574 LGALS16A8MUM7 142 aa32.73■■■□□ 2.83
CSNK1E-206ENST00000413574 GABRDO14764 452 aa32.73■■■□□ 2.83
CSNK1E-206ENST00000413574 TACC1O75410 805 aa32.73■■■□□ 2.83
CSNK1E-206ENST00000413574 WARSP23381 471 aaKnown RBP32.73■■■□□ 2.83
CSNK1E-206ENST00000413574 KLRC2P26717 231 aa32.73■■■□□ 2.83
CSNK1E-206ENST00000413574 HYAL1Q12794 435 aa32.73■■■□□ 2.83
CSNK1E-206ENST00000413574 CCDC85BQ15834 202 aaPredicted RBP32.73■■■□□ 2.83
CSNK1E-206ENST00000413574 TRIM65Q6PJ69 517 aa32.73■■■□□ 2.83
CSNK1E-206ENST00000413574 NAP1L5Q96NT1 182 aaPredicted RBP32.73■■■□□ 2.83
CSNK1E-206ENST00000413574 NT5C1BQ96P26 610 aa32.73■■■□□ 2.83
CSNK1E-206ENST00000413574 RBSNQ9H1K0 784 aa32.73■■■□□ 2.83
CSNK1E-206ENST00000413574 PDGFRBP09619 1106 aa32.72■■■□□ 2.83
CSNK1E-206ENST00000413574 NDUFV1P49821 464 aa32.72■■■□□ 2.83
CSNK1E-206ENST00000413574 RBM10P98175 930 aaKnown RBP32.72■■■□□ 2.83
CSNK1E-206ENST00000413574 PHLDB3Q6NSJ2 640 aa32.72■■■□□ 2.83
CSNK1E-206ENST00000413574 RRAGAQ7L523 313 aa32.72■■■□□ 2.83
CSNK1E-206ENST00000413574 THEM5Q8N1Q8 247 aa32.72■■■□□ 2.83
CSNK1E-206ENST00000413574 OR6B3Q8NGW1 331 aa32.72■■■□□ 2.83
CSNK1E-206ENST00000413574 KAT5Q92993 513 aa32.72■■■□□ 2.83
CSNK1E-206ENST00000413574 SPTBN5Q9NRC6 3674 aaKnown RBP32.71■■■□□ 2.83
CSNK1E-206ENST00000413574 COL6A3P12111 3177 aa32.71■■■□□ 2.83
CSNK1E-206ENST00000413574 SERPINC1P01008 464 aa32.71■■■□□ 2.83
CSNK1E-206ENST00000413574 CD58P19256 250 aa32.71■■■□□ 2.83
CSNK1E-206ENST00000413574 CREMQ03060 361 aa32.71■■■□□ 2.83
CSNK1E-206ENST00000413574 UBXN1Q04323 297 aa32.71■■■□□ 2.83
CSNK1E-206ENST00000413574 PTPN21Q16825 1174 aa32.71■■■□□ 2.83
CSNK1E-206ENST00000413574 DUSP6Q16828 381 aa32.71■■■□□ 2.83
CSNK1E-206ENST00000413574 GJB7Q6PEY0 223 aa32.71■■■□□ 2.83
CSNK1E-206ENST00000413574 PPM1KQ8N3J5 372 aa32.71■■■□□ 2.83
CSNK1E-206ENST00000413574 SNX25Q9H3E2 840 aa32.71■■■□□ 2.83
CSNK1E-206ENST00000413574 TEX33O43247 280 aa32.7■■■□□ 2.83
CSNK1E-206ENST00000413574 GNL1P36915 607 aaPredicted RBP32.7■■■□□ 2.83
CSNK1E-206ENST00000413574 LHX1P48742 406 aa32.7■■■□□ 2.83
CSNK1E-206ENST00000413574 FANCCQ00597 558 aa32.7■■■□□ 2.83
CSNK1E-206ENST00000413574 CUL2Q13617 745 aa32.7■■■□□ 2.83
CSNK1E-206ENST00000413574 SLC8B1Q6J4K2 584 aa32.7■■■□□ 2.83
CSNK1E-206ENST00000413574 PPM1EQ8WY54 764 aa32.7■■■□□ 2.83
CSNK1E-206ENST00000413574 SIX2Q9NPC8 291 aa32.7■■■□□ 2.83
CSNK1E-206ENST00000413574 ADH1AP07327 375 aa32.69■■■□□ 2.82
CSNK1E-206ENST00000413574 SPATA31D3P0C874 917 aa32.69■■■□□ 2.82
CSNK1E-206ENST00000413574 KLK7P49862 253 aa32.69■■■□□ 2.82
CSNK1E-206ENST00000413574 ROR1Q01973 937 aa32.69■■■□□ 2.82
CSNK1E-206ENST00000413574 CCDC142Q17RM4 750 aa32.69■■■□□ 2.82
CSNK1E-206ENST00000413574 FKBP15Q5T1M5 1219 aa32.69■■■□□ 2.82
CSNK1E-206ENST00000413574 SPATA31D4Q6ZUB0 917 aa32.69■■■□□ 2.82
CSNK1E-206ENST00000413574 PPP2R3CQ969Q6 453 aa32.69■■■□□ 2.82
CSNK1E-206ENST00000413574 RTN4Q9NQC3 1192 aaKnown RBP32.69■■■□□ 2.82
CSNK1E-206ENST00000413574 HMGXB4Q9UGU5 601 aa32.69■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms