RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 SLC7A8Q9UHI5 535 aa9.22□□□□□ -0.93
SMARCA1-203ENST00000371123 TMEM98Q9Y2Y6 226 aa9.22□□□□□ -0.93
SMARCA1-203ENST00000371123 GJA3Q9Y6H8 435 aa9.22□□□□□ -0.93
SMARCA1-203ENST00000371123 MYH11P35749 1972 aa9.22□□□□□ -0.93
SMARCA1-203ENST00000371123 CCDC160A6NGH7 325 aa9.22□□□□□ -0.93
SMARCA1-203ENST00000371123 FAM47DPA6NHR8 397 aa9.22□□□□□ -0.93
SMARCA1-203ENST00000371123 TMEM253P0C7T8 217 aa9.22□□□□□ -0.93
SMARCA1-203ENST00000371123 ADRA1DP25100 572 aa9.22□□□□□ -0.93
SMARCA1-203ENST00000371123 CHRNA3P32297 505 aa9.22□□□□□ -0.93
SMARCA1-203ENST00000371123 HOXD12P35452 270 aa9.22□□□□□ -0.93
SMARCA1-203ENST00000371123 SOX10P56693 466 aa9.22□□□□□ -0.93
SMARCA1-203ENST00000371123 TMED2Q15363 201 aa9.22□□□□□ -0.93
SMARCA1-203ENST00000371123 CBWD6Q4V339 395 aa9.22□□□□□ -0.93
SMARCA1-203ENST00000371123 MDH1BQ5I0G3 518 aa9.22□□□□□ -0.93
SMARCA1-203ENST00000371123 CBWD3Q5JTY5 395 aa9.22□□□□□ -0.93
SMARCA1-203ENST00000371123 CBWD5Q5RIA9 395 aa9.22□□□□□ -0.93
SMARCA1-203ENST00000371123 ATG14Q6ZNE5 492 aa9.22□□□□□ -0.93
SMARCA1-203ENST00000371123 TRMT10CQ7L0Y3 403 aaKnown RBP9.22□□□□□ -0.93
SMARCA1-203ENST00000371123 CDR2LQ86X02 465 aaPredicted RBP9.22□□□□□ -0.93
SMARCA1-203ENST00000371123 GRIN3AQ8TCU5 1115 aa9.22□□□□□ -0.93
SMARCA1-203ENST00000371123 MZB1Q8WU39 189 aa9.22□□□□□ -0.93
SMARCA1-203ENST00000371123 AK8Q96MA6 479 aa9.22□□□□□ -0.93
SMARCA1-203ENST00000371123 SUDS3Q9H7L9 328 aaPredicted RBP9.22□□□□□ -0.93
SMARCA1-203ENST00000371123 PRDM16Q9HAZ2 1276 aa9.22□□□□□ -0.93
SMARCA1-203ENST00000371123 PCDH18Q9HCL0 1135 aa9.22□□□□□ -0.93
SMARCA1-203ENST00000371123 HEY2Q9UBP5 337 aa9.22□□□□□ -0.93
SMARCA1-203ENST00000371123 ASTN1O14525 1302 aa9.21□□□□□ -0.93
SMARCA1-203ENST00000371123 E2F8A0AVK6 867 aa9.21□□□□□ -0.93
SMARCA1-203ENST00000371123 TRIM43BA6NCK2 446 aa9.21□□□□□ -0.93
SMARCA1-203ENST00000371123 FOXD2O60548 495 aaPredicted RBP9.21□□□□□ -0.93
SMARCA1-203ENST00000371123 ATP5HO75947 161 aa9.21□□□□□ -0.93
SMARCA1-203ENST00000371123 DLDP09622 509 aaKnown RBP9.21□□□□□ -0.93
SMARCA1-203ENST00000371123 STT3AP46977 705 aa9.21□□□□□ -0.93
SMARCA1-203ENST00000371123 KRT17Q04695 432 aa9.21□□□□□ -0.93
SMARCA1-203ENST00000371123 TRIM28Q13263 835 aaKnown RBP9.21□□□□□ -0.93
SMARCA1-203ENST00000371123 EML3Q32P44 896 aa9.21□□□□□ -0.93
SMARCA1-203ENST00000371123 NADK2Q4G0N4 442 aa9.21□□□□□ -0.93
SMARCA1-203ENST00000371123 SEL1L2Q5TEA6 688 aa9.21□□□□□ -0.93
SMARCA1-203ENST00000371123 SCARA5Q6ZMJ2 495 aa9.21□□□□□ -0.93
SMARCA1-203ENST00000371123 CTAGE3PQ8IX95 158 aa9.21□□□□□ -0.93
SMARCA1-203ENST00000371123 DIS3LQ8TF46 1054 aaKnown RBP9.21□□□□□ -0.93
SMARCA1-203ENST00000371123 FNBP1Q96RU3 617 aa9.21□□□□□ -0.93
SMARCA1-203ENST00000371123 CYTH2Q99418 400 aa9.21□□□□□ -0.93
SMARCA1-203ENST00000371123 PI4K2AQ9BTU6 479 aa9.21□□□□□ -0.93
SMARCA1-203ENST00000371123 RPL26L1Q9UNX3 145 aaKnown RBP9.21□□□□□ -0.93
SMARCA1-203ENST00000371123 RABGAP1Q9Y3P9 1069 aa9.21□□□□□ -0.93
SMARCA1-203ENST00000371123 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.21□□□□□ -0.93
SMARCA1-203ENST00000371123 ATP8B3O60423 1300 aa9.21□□□□□ -0.93
SMARCA1-203ENST00000371123 GON4LQ3T8J9 2241 aa9.21□□□□□ -0.93
SMARCA1-203ENST00000371123 RASA4BC9J798 803 aa9.21□□□□□ -0.94
SMARCA1-203ENST00000371123 CLDN3O15551 220 aa9.21□□□□□ -0.94
SMARCA1-203ENST00000371123 RASA4O43374 803 aa9.21□□□□□ -0.94
SMARCA1-203ENST00000371123 ALOX15P16050 662 aaPredicted RBP9.21□□□□□ -0.94
SMARCA1-203ENST00000371123 SPARCL1Q14515 664 aa9.21□□□□□ -0.94
SMARCA1-203ENST00000371123 TLR1Q15399 786 aa9.21□□□□□ -0.94
SMARCA1-203ENST00000371123 ZNF365Q70YC5 407 aa9.21□□□□□ -0.94
SMARCA1-203ENST00000371123 CYFIP1Q7L576 1253 aa9.21□□□□□ -0.94
SMARCA1-203ENST00000371123 SLC13A5Q86YT5 568 aaPredicted RBP9.21□□□□□ -0.94
SMARCA1-203ENST00000371123 RBM15BQ8NDT2 890 aaKnown RBP9.21□□□□□ -0.94
SMARCA1-203ENST00000371123 NMUR2Q9GZQ4 415 aa9.21□□□□□ -0.94
SMARCA1-203ENST00000371123 RIC8AQ9NPQ8 531 aa9.21□□□□□ -0.94
SMARCA1-203ENST00000371123 SH3GLB2Q9NR46 395 aa9.21□□□□□ -0.94
SMARCA1-203ENST00000371123 DNAJC12Q9UKB3 198 aa9.21□□□□□ -0.94
SMARCA1-203ENST00000371123 FZD1Q9UP38 647 aa9.21□□□□□ -0.94
SMARCA1-203ENST00000371123 MAP3K7O43318 606 aa9.21□□□□□ -0.94
SMARCA1-203ENST00000371123 TMCC1O94876 653 aa9.21□□□□□ -0.94
SMARCA1-203ENST00000371123 CD48P09326 243 aa9.21□□□□□ -0.94
SMARCA1-203ENST00000371123 PEX2P28328 305 aa9.21□□□□□ -0.94
SMARCA1-203ENST00000371123 RAP1GDS1P52306 607 aa9.21□□□□□ -0.94
SMARCA1-203ENST00000371123 QRICH1Q2TAL8 776 aa9.21□□□□□ -0.94
SMARCA1-203ENST00000371123 ZNF554Q86TJ5 538 aa9.21□□□□□ -0.94
SMARCA1-203ENST00000371123 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.21□□□□□ -0.94
SMARCA1-203ENST00000371123 JDP2Q8WYK2 163 aa9.21□□□□□ -0.94
SMARCA1-203ENST00000371123 ERLEC1Q96DZ1 483 aa9.21□□□□□ -0.94
SMARCA1-203ENST00000371123 CD209Q9NNX6 404 aa9.21□□□□□ -0.94
SMARCA1-203ENST00000371123 ZNF180Q9UJW8 692 aa9.21□□□□□ -0.94
SMARCA1-203ENST00000371123 CSDE1O75534 798 aaKnown RBP9.2□□□□□ -0.94
SMARCA1-203ENST00000371123 SERPINB7O75635 380 aa9.2□□□□□ -0.94
SMARCA1-203ENST00000371123 DESP17661 470 aa9.2□□□□□ -0.94
SMARCA1-203ENST00000371123 CCR3P51677 355 aa9.2□□□□□ -0.94
SMARCA1-203ENST00000371123 DSG1Q02413 1049 aa9.2□□□□□ -0.94
SMARCA1-203ENST00000371123 C12orf60Q5U649 245 aa9.2□□□□□ -0.94
SMARCA1-203ENST00000371123 LLGL2Q6P1M3 1020 aa9.2□□□□□ -0.94
SMARCA1-203ENST00000371123 FOXR2Q6PJQ5 311 aa9.2□□□□□ -0.94
SMARCA1-203ENST00000371123 C12orf50Q8NA57 414 aaPredicted RBP9.2□□□□□ -0.94
SMARCA1-203ENST00000371123 PYDC1Q8WXC3 89 aa9.2□□□□□ -0.94
SMARCA1-203ENST00000371123 CEP63Q96MT8 703 aa9.2□□□□□ -0.94
SMARCA1-203ENST00000371123 NYXQ9GZU5 481 aa9.2□□□□□ -0.94
SMARCA1-203ENST00000371123 TAOK3Q9H2K8 898 aa9.2□□□□□ -0.94
SMARCA1-203ENST00000371123 PFDN4Q9NQP4 134 aa9.2□□□□□ -0.94
SMARCA1-203ENST00000371123 FBXO28Q9NVF7 368 aa9.2□□□□□ -0.94
SMARCA1-203ENST00000371123 MTRF1LQ9UGC7 380 aaKnown RBP9.2□□□□□ -0.94
SMARCA1-203ENST00000371123 SUN2Q9UH99 717 aa9.2□□□□□ -0.94
SMARCA1-203ENST00000371123 DDX60LQ5H9U9 1706 aaKnown RBP9.2□□□□□ -0.94
SMARCA1-203ENST00000371123 PRPF4O43172 522 aaKnown RBP eCLIP9.2□□□□□ -0.942e-6■□□□□ 10.2
SMARCA1-203ENST00000371123 SERPINB2P05120 415 aa9.2□□□□□ -0.94
SMARCA1-203ENST00000371123 CPOXP36551 454 aa9.2□□□□□ -0.94
SMARCA1-203ENST00000371123 PSMD7P51665 324 aa9.2□□□□□ -0.94
SMARCA1-203ENST00000371123 ADARP55265 1226 aaKnown RBP9.2□□□□□ -0.94
SMARCA1-203ENST00000371123 STRN3Q13033 797 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms