RNA–Protein interactions for RNA: YPR088C

SRP54, Transcript of Signal recognition particle (SRP) subunit (homolog of mammalian SRP54), yeastyeast

Gene SRP54, Length 1,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP54YPR088C URA5P13298 226 aaKnown RBP6.85□□□□□ -1.31
SRP54YPR088C ECM25P32525 599 aa6.85□□□□□ -1.31
SRP54YPR088C GZF3P42944 551 aaKnown RBP6.85□□□□□ -1.31
SRP54YPR088C FMP41P53889 259 aaKnown RBP6.85□□□□□ -1.31
SRP54YPR088C MIX17Q03667 156 aa6.85□□□□□ -1.31
SRP54YPR088C YLR179CQ06252 201 aaKnown RBP6.85□□□□□ -1.31
SRP54YPR088C GEP5Q12393 293 aa6.85□□□□□ -1.31
SRP54YPR088C BGL2P15703 313 aaKnown RBP6.84□□□□□ -1.31
SRP54YPR088C ATP3P38077 311 aaKnown RBP6.84□□□□□ -1.31
SRP54YPR088C YBR292CP38357 123 aa6.84□□□□□ -1.31
SRP54YPR088C PSD1P39006 500 aa6.84□□□□□ -1.31
SRP54YPR088C PEX7P39108 375 aa6.84□□□□□ -1.31
SRP54YPR088C SPC25P40014 221 aa6.84□□□□□ -1.31
SRP54YPR088C COX15P40086 486 aa6.84□□□□□ -1.31
SRP54YPR088C YGR045CP53229 120 aa6.84□□□□□ -1.31
SRP54YPR088C HCH1P53834 153 aa6.84□□□□□ -1.31
SRP54YPR088C TDA6Q06466 467 aa6.84□□□□□ -1.31
SRP54YPR088C YPS3Q12303 508 aa6.84□□□□□ -1.31
SRP54YPR088C HEM13P11353 328 aaKnown RBP6.83□□□□□ -1.32
SRP54YPR088C SRB6P32570 121 aa6.83□□□□□ -1.32
SRP54YPR088C DFG10P40526 253 aa6.83□□□□□ -1.32
SRP54YPR088C YJR056CP47115 236 aa6.83□□□□□ -1.32
SRP54YPR088C STD1Q02794 444 aa6.83□□□□□ -1.32
SRP54YPR088C YDL242WQ07746 117 aa6.83□□□□□ -1.32
SRP54YPR088C RAX2Q12465 1220 aa6.83□□□□□ -1.32
SRP54YPR088C TRP4P07285 380 aaPredicted RBP6.83□□□□□ -1.32
SRP54YPR088C NOP1P15646 327 aaKnown RBP6.83□□□□□ -1.32
SRP54YPR088C FCY2P17064 533 aa6.83□□□□□ -1.32
SRP54YPR088C LDS1P31379 325 aa6.83□□□□□ -1.32
SRP54YPR088C MSK1P32048 576 aa6.83□□□□□ -1.32
SRP54YPR088C VMA11P32842 164 aa6.83□□□□□ -1.32
SRP54YPR088C NOP16P40007 231 aaKnown RBP6.83□□□□□ -1.32
SRP54YPR088C CAF16P43569 289 aa6.83□□□□□ -1.32
SRP54YPR088C PUS4P48567 403 aaKnown RBP6.83□□□□□ -1.32
SRP54YPR088C SSU72P53538 206 aaPredicted RBP6.83□□□□□ -1.32
SRP54YPR088C DYN2Q02647 92 aa6.83□□□□□ -1.32
SRP54YPR088C ADD37Q03233 198 aa6.83□□□□□ -1.32
SRP54YPR088C SDO1Q07953 250 aaKnown RBP6.83□□□□□ -1.32
SRP54YPR088C COX19Q3E731 98 aa6.83□□□□□ -1.32
SRP54YPR088C YBR184WP38299 523 aa6.82□□□□□ -1.32
SRP54YPR088C YIP1P53039 248 aa6.82□□□□□ -1.32
SRP54YPR088C CRH1P53301 507 aa6.82□□□□□ -1.32
SRP54YPR088C ERV25P54837 211 aaKnown RBP6.82□□□□□ -1.32
SRP54YPR088C TMA23Q03525 211 aa6.82□□□□□ -1.32
SRP54YPR088C VMA9Q3E7B6 73 aa6.82□□□□□ -1.32
SRP54YPR088C HTB1P02293 131 aaKnown RBP6.81□□□□□ -1.32
SRP54YPR088C ADE8P04161 214 aa6.81□□□□□ -1.32
SRP54YPR088C RPS25BP0C0T4 108 aaKnown RBP6.81□□□□□ -1.32
SRP54YPR088C NSA2P40078 261 aaKnown RBP6.81□□□□□ -1.32
SRP54YPR088C YGR269WP40326 108 aa6.81□□□□□ -1.32
SRP54YPR088C MCM22P47167 239 aa6.81□□□□□ -1.32
SRP54YPR088C FRQ1Q06389 190 aa6.81□□□□□ -1.32
SRP54YPR088C USV1Q12132 391 aa6.81□□□□□ -1.32
SRP54YPR088C YOR015WQ12169 119 aa6.81□□□□□ -1.32
SRP54YPR088C ATO3Q12359 275 aa6.81□□□□□ -1.32
SRP54YPR088C RPS25AQ3E792 108 aaPredicted RBP6.81□□□□□ -1.32
SRP54YPR088C URA2P07259 2214 aaKnown RBP6.8□□□□□ -1.32
SRP54YPR088C WSS1P38838 269 aa6.8□□□□□ -1.32
SRP54YPR088C HXT14P42833 540 aa6.8□□□□□ -1.32
SRP54YPR088C BNA1P47096 177 aa6.8□□□□□ -1.32
SRP54YPR088C POC4Q12245 148 aaPredicted RBP6.8□□□□□ -1.32
SRP54YPR088C AHT1P29589 182 aa6.79□□□□□ -1.32
SRP54YPR088C YNL234WP53857 426 aa6.79□□□□□ -1.32
SRP54YPR088C DAL4Q04895 635 aa6.79□□□□□ -1.32
SRP54YPR088C QCR9P22289 66 aa6.79□□□□□ -1.32
SRP54YPR088C SPO13P23624 291 aa6.79□□□□□ -1.32
SRP54YPR088C ELO2P25358 347 aa6.79□□□□□ -1.32
SRP54YPR088C CDC50P25656 391 aa6.79□□□□□ -1.32
SRP54YPR088C SHB17P36136 271 aaKnown RBP6.79□□□□□ -1.32
SRP54YPR088C FLO5P38894 1075 aa6.79□□□□□ -1.32
SRP54YPR088C YGR151CP53287 111 aa6.79□□□□□ -1.32
SRP54YPR088C YAP1802P53309 568 aa6.79□□□□□ -1.32
SRP54YPR088C MRS3P10566 314 aa6.78□□□□□ -1.32
SRP54YPR088C PHO85P17157 305 aa6.78□□□□□ -1.32
SRP54YPR088C RAD23P32628 398 aaKnown RBP6.78□□□□□ -1.32
SRP54YPR088C SMD3P43321 101 aaKnown RBP6.78□□□□□ -1.32
SRP54YPR088C CAF40P53829 373 aa6.78□□□□□ -1.32
SRP54YPR088C YMR317WQ04893 1140 aa6.78□□□□□ -1.32
SRP54YPR088C JID1Q12350 301 aa6.78□□□□□ -1.32
SRP54YPR088C Q0142Q9ZZW4 58 aa6.78□□□□□ -1.32
SRP54YPR088C YKR045CP36138 183 aa6.77□□□□□ -1.33
SRP54YPR088C RIB5P38145 238 aa6.77□□□□□ -1.33
SRP54YPR088C YIL024CP40543 189 aa6.77□□□□□ -1.33
SRP54YPR088C RIB4P50861 169 aaPredicted RBP6.77□□□□□ -1.33
SRP54YPR088C TMA10Q06177 86 aa6.77□□□□□ -1.33
SRP54YPR088C RAD28Q12021 506 aa6.77□□□□□ -1.33
SRP54YPR088C FCY1Q12178 158 aa6.77□□□□□ -1.33
SRP54YPR088C TY1A-DR3Q12441 440 aa6.77□□□□□ -1.33
SRP54YPR088C TOM40P23644 387 aaKnown RBP6.76□□□□□ -1.33
SRP54YPR088C ACP1P32463 125 aa6.76□□□□□ -1.33
SRP54YPR088C FPR2P32472 135 aa6.76□□□□□ -1.33
SRP54YPR088C LST8P41318 303 aa6.76□□□□□ -1.33
SRP54YPR088C YFL054CP43549 646 aa6.76□□□□□ -1.33
SRP54YPR088C YJR015WP47090 510 aa6.76□□□□□ -1.33
SRP54YPR088C BOR1P53838 576 aa6.76□□□□□ -1.33
SRP54YPR088C ARR3Q06598 404 aa6.76□□□□□ -1.33
SRP54YPR088C NDE2Q07500 545 aa6.76□□□□□ -1.33
SRP54YPR088C POM34Q12445 299 aa6.76□□□□□ -1.33
SRP54YPR088C CNB1P25296 175 aa6.76□□□□□ -1.33
SRP54YPR088C YBL059WP34224 193 aa6.76□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms