RNA–Protein interactions for RNA: YPL072W

UBP16, Transcript of Deubiquitinating enzyme anchored to the outer mitochondrial membrane, yeastyeast

Gene UBP16, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP16YPL072W VTH2P40890 1549 aa1.69□□□□□ -2.14
UBP16YPL072W CMD1P06787 147 aaKnown RBP1.69□□□□□ -2.14
UBP16YPL072W PET9P18239 318 aaKnown RBP1.69□□□□□ -2.14
UBP16YPL072W AHC2P25649 128 aa1.69□□□□□ -2.14
UBP16YPL072W UBC6P33296 250 aaPredicted RBP1.69□□□□□ -2.14
UBP16YPL072W MAK5P38112 773 aaPredicted RBP1.69□□□□□ -2.14
UBP16YPL072W UMP1P38293 148 aa1.69□□□□□ -2.14
UBP16YPL072W AME1P38313 324 aa1.69□□□□□ -2.14
UBP16YPL072W NVJ1P38881 321 aa1.69□□□□□ -2.14
UBP16YPL072W RPL33BP41056 107 aaKnown RBP1.69□□□□□ -2.14
UBP16YPL072W SKI6P46948 246 aaPredicted RBP1.69□□□□□ -2.14
UBP16YPL072W YJR146WP47174 117 aa1.69□□□□□ -2.14
UBP16YPL072W YDR274CP87283 123 aa1.69□□□□□ -2.14
UBP16YPL072W MAK3Q03503 176 aa1.69□□□□□ -2.14
UBP16YPL072W HPT1Q04178 221 aaKnown RBP1.69□□□□□ -2.14
UBP16YPL072W YMR315WQ04869 349 aaKnown RBP1.69□□□□□ -2.14
UBP16YPL072W MMS1Q06211 1407 aa1.68□□□□□ -2.14
UBP16YPL072W CPA1P07258 411 aaKnown RBP1.68□□□□□ -2.14
UBP16YPL072W MEI4P29467 408 aa1.68□□□□□ -2.14
UBP16YPL072W YET1P35723 206 aa1.68□□□□□ -2.14
UBP16YPL072W ERV15P38312 142 aa1.68□□□□□ -2.14
UBP16YPL072W YBR285WP38354 144 aa1.68□□□□□ -2.14
UBP16YPL072W YHR180WP38868 163 aa1.68□□□□□ -2.14
UBP16YPL072W YER134CP40081 178 aa1.68□□□□□ -2.14
UBP16YPL072W ICE2P40499 491 aa1.68□□□□□ -2.14
UBP16YPL072W PRM10P42946 383 aa1.68□□□□□ -2.14
UBP16YPL072W EAF6P47128 113 aa1.68□□□□□ -2.14
UBP16YPL072W DYN3Q04949 312 aa1.68□□□□□ -2.14
UBP16YPL072W YOR342CQ12182 319 aa1.68□□□□□ -2.14
UBP16YPL072W MPD1Q12404 318 aaKnown RBP1.68□□□□□ -2.14
UBP16YPL072W GDB1Q06625 1536 aa1.68□□□□□ -2.14
UBP16YPL072W GEA2P39993 1459 aaKnown RBP1.68□□□□□ -2.14
UBP16YPL072W NUP159P40477 1460 aa1.68□□□□□ -2.14
UBP16YPL072W YIL177CP40434 1758 aa1.68□□□□□ -2.14
UBP16YPL072W YJL225CP40889 1758 aa1.68□□□□□ -2.14
UBP16YPL072W ATP15P21306 62 aa1.67□□□□□ -2.14
UBP16YPL072W PEX4P29340 183 aa1.67□□□□□ -2.14
UBP16YPL072W OCH1P31755 480 aa1.67□□□□□ -2.14
UBP16YPL072W PAN3P36102 679 aaPredicted RBP1.67□□□□□ -2.14
UBP16YPL072W YKR041WP36134 250 aa1.67□□□□□ -2.14
UBP16YPL072W YER121WP40076 114 aa1.67□□□□□ -2.14
UBP16YPL072W YKE4P40544 346 aa1.67□□□□□ -2.14
UBP16YPL072W ERG25P53045 309 aa1.67□□□□□ -2.14
UBP16YPL072W NUP49Q02199 472 aa1.67□□□□□ -2.14
UBP16YPL072W SPG3Q04398 127 aaPredicted RBP1.67□□□□□ -2.14
UBP16YPL072W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.67□□□□□ -2.14not detected
UBP16YPL072W VPS68Q12016 184 aa1.67□□□□□ -2.14
UBP16YPL072W YML100W-AQ8TGT0 57 aa1.67□□□□□ -2.14
UBP16YPL072W CDC25P04821 1589 aa1.67□□□□□ -2.14
UBP16YPL072W YSP2Q06681 1438 aa1.67□□□□□ -2.14
UBP16YPL072W DNF1P32660 1571 aa1.66□□□□□ -2.14
UBP16YPL072W RPS28BP0C0X0 67 aaKnown RBP1.66□□□□□ -2.14
UBP16YPL072W ARO7P32178 256 aa1.66□□□□□ -2.14
UBP16YPL072W CLG1P35190 452 aa1.66□□□□□ -2.14
UBP16YPL072W TVP38P36164 337 aa1.66□□□□□ -2.14
UBP16YPL072W PHO88P38264 188 aaPredicted RBP1.66□□□□□ -2.14
UBP16YPL072W OPY1P38271 328 aa1.66□□□□□ -2.14
UBP16YPL072W YEA4P40004 342 aa1.66□□□□□ -2.14
UBP16YPL072W FCY21P40039 528 aa1.66□□□□□ -2.14
UBP16YPL072W TIR3P40552 269 aa1.66□□□□□ -2.14
UBP16YPL072W SER2P42941 309 aa1.66□□□□□ -2.14
UBP16YPL072W YFH7P43591 353 aa1.66□□□□□ -2.14
UBP16YPL072W YJR111CP47148 283 aaKnown RBP1.66□□□□□ -2.14
UBP16YPL072W TDA4P47153 279 aa1.66□□□□□ -2.14
UBP16YPL072W YGL235WP53071 178 aa1.66□□□□□ -2.14
UBP16YPL072W PGA1P53896 198 aa1.66□□□□□ -2.14
UBP16YPL072W DAD3P69850 94 aa1.66□□□□□ -2.14
UBP16YPL072W TMA20P89886 181 aaPredicted RBP1.66□□□□□ -2.14
UBP16YPL072W YDR476CQ03362 224 aa1.66□□□□□ -2.14
UBP16YPL072W MRPS8Q03799 155 aa1.66□□□□□ -2.14
UBP16YPL072W GPI17Q04080 534 aa1.66□□□□□ -2.14
UBP16YPL072W SPC2Q04969 178 aa1.66□□□□□ -2.14
UBP16YPL072W YOL014WQ08110 124 aa1.66□□□□□ -2.14
UBP16YPL072W YLR053CQ12026 108 aa1.66□□□□□ -2.14
UBP16YPL072W RPS28AQ3E7X9 67 aaPredicted RBP1.66□□□□□ -2.14
UBP16YPL072W ODC2Q99297 307 aa1.66□□□□□ -2.14
UBP16YPL072W NUP170P38181 1502 aa1.66□□□□□ -2.14
UBP16YPL072W TY2B-LR1P0C2J3 1770 aa1.66□□□□□ -2.14
UBP16YPL072W TY2B-FP0CX63 1770 aa1.66□□□□□ -2.14
UBP16YPL072W TY2B-GR2P0CX64 1770 aa1.66□□□□□ -2.14
UBP16YPL072W TY2B-CP25384 1770 aa1.66□□□□□ -2.14
UBP16YPL072W TY2B-DR2Q03494 1770 aa1.66□□□□□ -2.14
UBP16YPL072W TY1B-DR1Q03855 1755 aa1.66□□□□□ -2.14
UBP16YPL072W TY2B-DR3Q07791 1770 aaKnown RBP1.66□□□□□ -2.14
UBP16YPL072W TY2B-OR1Q12113 1770 aa1.66□□□□□ -2.14
UBP16YPL072W TY2B-DR1Q12472 1770 aa1.66□□□□□ -2.14
UBP16YPL072W TY2B-OR2Q12501 1770 aa1.66□□□□□ -2.14
UBP16YPL072W IQG1Q12280 1495 aa1.66□□□□□ -2.14
UBP16YPL072W TY1B-DR3Q99231 1755 aa1.66□□□□□ -2.14
UBP16YPL072W TY3B-GQ99315 1547 aa1.66□□□□□ -2.14
UBP16YPL072W YKL102CP34249 101 aa1.66□□□□□ -2.14
UBP16YPL072W YOR062CP36025 268 aa1.66□□□□□ -2.14
UBP16YPL072W FIG1P38224 298 aa1.66□□□□□ -2.14
UBP16YPL072W POP7P38291 140 aa1.66□□□□□ -2.14
UBP16YPL072W YAP3P38749 330 aa1.66□□□□□ -2.14
UBP16YPL072W NSG1P38837 291 aa1.66□□□□□ -2.14
UBP16YPL072W YMR295CQ03559 197 aa1.66□□□□□ -2.14
UBP16YPL072W MET5P47169 1442 aa1.65□□□□□ -2.14
UBP16YPL072W ULS1Q08562 1619 aa1.65□□□□□ -2.14
UBP16YPL072W TY2B-BQ12491 1770 aa1.65□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 75.7 ms