RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W GAS3Q03655 524 aa1.72□□□□□ -2.13
VPS16YPL045W RPS28BP0C0X0 67 aaKnown RBP1.72□□□□□ -2.13
VPS16YPL045W MAG1P22134 296 aaKnown RBP1.72□□□□□ -2.13
VPS16YPL045W FIS1P40515 155 aa1.72□□□□□ -2.13
VPS16YPL045W FMP32P43557 207 aa1.72□□□□□ -2.13
VPS16YPL045W YFL012WP43580 148 aa1.72□□□□□ -2.13
VPS16YPL045W RDI1Q12434 202 aa1.72□□□□□ -2.13
VPS16YPL045W RPS28AQ3E7X9 67 aaPredicted RBP1.72□□□□□ -2.13
VPS16YPL045W YFR032C-BQ8TGU2 87 aa1.72□□□□□ -2.13
VPS16YPL045W PET20Q99373 253 aa1.72□□□□□ -2.13
VPS16YPL045W RAD10P06838 210 aa1.71□□□□□ -2.14
VPS16YPL045W SNF4P12904 322 aa1.71□□□□□ -2.14
VPS16YPL045W UTP30P36144 274 aaKnown RBP1.71□□□□□ -2.14
VPS16YPL045W YGP1P38616 354 aaKnown RBP1.71□□□□□ -2.14
VPS16YPL045W EDC3P39998 551 aaKnown RBP1.71□□□□□ -2.14
VPS16YPL045W PFS2P42841 465 aaKnown RBP1.71□□□□□ -2.14
VPS16YPL045W ARP3P47117 449 aaKnown RBP1.71□□□□□ -2.14
VPS16YPL045W SBH2P52871 88 aa1.71□□□□□ -2.14
VPS16YPL045W YDC1Q02896 317 aa1.71□□□□□ -2.14
VPS16YPL045W ATG39Q06159 398 aa1.71□□□□□ -2.14
VPS16YPL045W YPL162CQ12042 273 aa1.71□□□□□ -2.14
VPS16YPL045W NSL1Q12143 216 aa1.71□□□□□ -2.14
VPS16YPL045W RIO1Q12196 484 aaKnown RBP1.71□□□□□ -2.14
VPS16YPL045W MBF1O14467 151 aaKnown RBP1.71□□□□□ -2.14
VPS16YPL045W AHC2P25649 128 aa1.71□□□□□ -2.14
VPS16YPL045W SEC17P32602 292 aa1.71□□□□□ -2.14
VPS16YPL045W SRP102P36057 244 aaPredicted RBP1.71□□□□□ -2.14
VPS16YPL045W PHO88P38264 188 aaPredicted RBP1.71□□□□□ -2.14
VPS16YPL045W AST2P39945 430 aaKnown RBP1.71□□□□□ -2.14
VPS16YPL045W SNM1P40993 198 aa1.71□□□□□ -2.14
VPS16YPL045W AIM34Q03673 198 aa1.71□□□□□ -2.14
VPS16YPL045W SUE1Q06524 206 aa1.71□□□□□ -2.14
VPS16YPL045W YLR053CQ12026 108 aa1.71□□□□□ -2.14
VPS16YPL045W PEX11Q12462 236 aa1.71□□□□□ -2.14
VPS16YPL045W ATG22P25568 528 aa1.7□□□□□ -2.14
VPS16YPL045W YAR068WP39564 161 aa1.7□□□□□ -2.14
VPS16YPL045W GLE2P40066 365 aa1.7□□□□□ -2.14
VPS16YPL045W ICE2P40499 491 aa1.7□□□□□ -2.14
VPS16YPL045W HYR1P40581 163 aaKnown RBP1.7□□□□□ -2.14
VPS16YPL045W OST2P46964 130 aa1.7□□□□□ -2.14
VPS16YPL045W NQM1P53228 333 aaPredicted RBP1.7□□□□□ -2.14
VPS16YPL045W YDR249CQ03787 373 aa1.7□□□□□ -2.14
VPS16YPL045W SHH4Q06236 168 aa1.7□□□□□ -2.14
VPS16YPL045W REP2P03872 296 aa1.7□□□□□ -2.14
VPS16YPL045W HIS3P06633 220 aa1.7□□□□□ -2.14
VPS16YPL045W YLR156WP0CE96 114 aa1.7□□□□□ -2.14
VPS16YPL045W YLR159WP0CE97 114 aa1.7□□□□□ -2.14
VPS16YPL045W YLR161WP0CE98 114 aa1.7□□□□□ -2.14
VPS16YPL045W LDB16P25587 256 aa1.7□□□□□ -2.14
VPS16YPL045W POP4P38336 279 aa1.7□□□□□ -2.14
VPS16YPL045W ECO1P43605 281 aa1.7□□□□□ -2.14
VPS16YPL045W LSM1P47017 172 aaKnown RBP1.7□□□□□ -2.14
VPS16YPL045W ARO8P53090 500 aaKnown RBP1.7□□□□□ -2.14
VPS16YPL045W APJ1P53940 528 aa1.7□□□□□ -2.14
VPS16YPL045W HSK3P69852 69 aa1.7□□□□□ -2.14
VPS16YPL045W YPR063CQ12160 140 aa1.7□□□□□ -2.14
VPS16YPL045W PSF1Q12488 208 aa1.7□□□□□ -2.14
VPS16YPL045W YLR422WQ06409 1932 aa1.7□□□□□ -2.14
VPS16YPL045W Q0255P03881 472 aa1.69□□□□□ -2.14
VPS16YPL045W RPL9AP05738 191 aaKnown RBP1.69□□□□□ -2.14
VPS16YPL045W PET9P18239 318 aaKnown RBP1.69□□□□□ -2.14
VPS16YPL045W SCO1P23833 295 aa1.69□□□□□ -2.14
VPS16YPL045W SEC14P24280 304 aaKnown RBP1.69□□□□□ -2.14
VPS16YPL045W KDX1P36005 433 aa1.69□□□□□ -2.14
VPS16YPL045W MRPS9P38120 278 aa1.69□□□□□ -2.14
VPS16YPL045W YHR125WP38831 101 aa1.69□□□□□ -2.14
VPS16YPL045W GAA1P39012 614 aa1.69□□□□□ -2.14
VPS16YPL045W ARC15P40518 154 aaRIP-Chip data1.69□□□□□ -2.14not detected
VPS16YPL045W GON7P46984 123 aa1.69□□□□□ -2.14
VPS16YPL045W RPL9BP51401 191 aaKnown RBP1.69□□□□□ -2.14
VPS16YPL045W DYN3Q04949 312 aa1.69□□□□□ -2.14
VPS16YPL045W SCW10Q04951 389 aa1.69□□□□□ -2.14
VPS16YPL045W YOR268CQ08734 132 aa1.69□□□□□ -2.14
VPS16YPL045W MCP1Q12106 302 aa1.69□□□□□ -2.14
VPS16YPL045W CMD1P06787 147 aaKnown RBP1.69□□□□□ -2.14
VPS16YPL045W RPB3P16370 318 aaKnown RBP1.69□□□□□ -2.14
VPS16YPL045W BET1P22804 142 aa1.69□□□□□ -2.14
VPS16YPL045W TKL2P33315 681 aa1.69□□□□□ -2.14
VPS16YPL045W SKG1P36169 355 aa1.69□□□□□ -2.14
VPS16YPL045W FMP23P38231 175 aa1.69□□□□□ -2.14
VPS16YPL045W CTR2P38865 189 aa1.69□□□□□ -2.14
VPS16YPL045W RSM25P40496 264 aa1.69□□□□□ -2.14
VPS16YPL045W YJR111CP47148 283 aaKnown RBP1.69□□□□□ -2.14
VPS16YPL045W PLP1Q04004 230 aa1.69□□□□□ -2.14
VPS16YPL045W GPI17Q04080 534 aa1.69□□□□□ -2.14
VPS16YPL045W HPT1Q04178 221 aaKnown RBP1.69□□□□□ -2.14
VPS16YPL045W ARR2Q06597 130 aa1.69□□□□□ -2.14
VPS16YPL045W YLR031WQ07978 186 aa1.69□□□□□ -2.14
VPS16YPL045W DGA1Q08650 418 aa1.69□□□□□ -2.14
VPS16YPL045W MPD1Q12404 318 aaKnown RBP1.69□□□□□ -2.14
VPS16YPL045W MHT1Q12525 324 aa1.69□□□□□ -2.14
VPS16YPL045W RPL22AP05749 121 aaKnown RBP1.68□□□□□ -2.14
VPS16YPL045W ADH3P07246 375 aaKnown RBP1.68□□□□□ -2.14
VPS16YPL045W YCR023CP25351 611 aa1.68□□□□□ -2.14
VPS16YPL045W UBC8P28263 218 aa1.68□□□□□ -2.14
VPS16YPL045W MDH3P32419 343 aaKnown RBP RIP-Chip data1.68□□□□□ -2.14not detected
VPS16YPL045W YKL102CP34249 101 aa1.68□□□□□ -2.14
VPS16YPL045W COS6P53344 381 aa1.68□□□□□ -2.14
VPS16YPL045W PGA1P53896 198 aa1.68□□□□□ -2.14
VPS16YPL045W TRM12Q04235 462 aa1.68□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms