RNA–Protein interactions for RNA: YPL002C

SNF8, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene SNF8, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF8YPL002C RPS20P38701 121 aaKnown RBP3.32□□□□□ -1.88
SNF8YPL002C COS8P38723 381 aa3.32□□□□□ -1.88
SNF8YPL002C UIP3P39547 235 aa3.32□□□□□ -1.88
SNF8YPL002C PGD1P40356 397 aa3.32□□□□□ -1.88
SNF8YPL002C YIL060WP40519 144 aa3.32□□□□□ -1.88
SNF8YPL002C YJL016WP47072 561 aa3.32□□□□□ -1.88
SNF8YPL002C VPS71Q03433 280 aa3.32□□□□□ -1.88
SNF8YPL002C DPP1Q05521 289 aa3.32□□□□□ -1.88
SNF8YPL002C ASR1Q06834 288 aa3.32□□□□□ -1.88
SNF8YPL002C YLR050CQ12155 161 aaKnown RBP3.32□□□□□ -1.88
SNF8YPL002C RPL18AP0CX49 186 aaKnown RBP3.31□□□□□ -1.88
SNF8YPL002C RPL18BP0CX50 186 aaKnown RBP3.31□□□□□ -1.88
SNF8YPL002C MRP1P10662 321 aaKnown RBP3.31□□□□□ -1.88
SNF8YPL002C HYM1P32464 399 aa3.31□□□□□ -1.88
SNF8YPL002C SIP2P34164 415 aaKnown RBP3.31□□□□□ -1.88
SNF8YPL002C YHR035WP38769 630 aa3.31□□□□□ -1.88
SNF8YPL002C MAM33P40513 266 aa3.31□□□□□ -1.88
SNF8YPL002C OST1P41543 476 aaKnown RBP3.31□□□□□ -1.88
SNF8YPL002C MIC26P50087 233 aa3.31□□□□□ -1.88
SNF8YPL002C MGA1P53050 456 aa3.31□□□□□ -1.88
SNF8YPL002C NIF3P53081 288 aa3.31□□□□□ -1.88
SNF8YPL002C ASI3P53983 676 aa3.31□□□□□ -1.88
SNF8YPL002C YPR098CQ06089 161 aa3.31□□□□□ -1.88
SNF8YPL002C PEX30Q06169 523 aa3.31□□□□□ -1.88
SNF8YPL002C HRD1Q08109 551 aa3.31□□□□□ -1.88
SNF8YPL002C POM33Q12164 279 aa3.31□□□□□ -1.88
SNF8YPL002C SLO1Q3E784 85 aa3.31□□□□□ -1.88
SNF8YPL002C YBR085C-AO43137 85 aa3.3□□□□□ -1.88
SNF8YPL002C GCN3P14741 305 aa3.3□□□□□ -1.88
SNF8YPL002C CPT1P17898 393 aa3.3□□□□□ -1.88
SNF8YPL002C DEG1P31115 442 aaKnown RBP3.3□□□□□ -1.88
SNF8YPL002C UGX2P32772 223 aa3.3□□□□□ -1.88
SNF8YPL002C GOS1P38736 223 aa3.3□□□□□ -1.88
SNF8YPL002C FAR7P43592 221 aa3.3□□□□□ -1.88
SNF8YPL002C YAE1P47118 141 aaPredicted RBP3.3□□□□□ -1.88
SNF8YPL002C WSC2P53832 503 aa3.3□□□□□ -1.88
SNF8YPL002C NRK1P53915 240 aa3.3□□□□□ -1.88
SNF8YPL002C UBC7Q02159 165 aa3.3□□□□□ -1.88
SNF8YPL002C AIM34Q03673 198 aa3.3□□□□□ -1.88
SNF8YPL002C PKR1Q03880 122 aaKnown RBP3.3□□□□□ -1.88
SNF8YPL002C MRPL51Q06090 140 aaPredicted RBP3.3□□□□□ -1.88
SNF8YPL002C MRX9Q07349 420 aaKnown RBP3.3□□□□□ -1.88
SNF8YPL002C PEX27Q08580 376 aa3.3□□□□□ -1.88
SNF8YPL002C SPC3Q12133 184 aa3.3□□□□□ -1.88
SNF8YPL002C SIA1Q12212 622 aa3.3□□□□□ -1.88
SNF8YPL002C ATP14Q12349 124 aa3.3□□□□□ -1.88
SNF8YPL002C RDI1Q12434 202 aa3.3□□□□□ -1.88
SNF8YPL002C YPR1Q12458 312 aa3.3□□□□□ -1.88
SNF8YPL002C YIR021W-AQ3E739 70 aa3.3□□□□□ -1.88
SNF8YPL002C OPI3P05375 206 aa3.29□□□□□ -1.88
SNF8YPL002C SPS4P09937 338 aa3.29□□□□□ -1.88
SNF8YPL002C PCL1P24867 279 aa3.29□□□□□ -1.88
SNF8YPL002C ATG22P25568 528 aa3.29□□□□□ -1.88
SNF8YPL002C RNP1P32385 249 aa3.29□□□□□ -1.88
SNF8YPL002C TMA19P35691 167 aaKnown RBP3.29□□□□□ -1.88
SNF8YPL002C VMA7P39111 118 aa3.29□□□□□ -1.88
SNF8YPL002C MPM1P40364 252 aa3.29□□□□□ -1.88
SNF8YPL002C BMT5P40493 336 aa3.29□□□□□ -1.88
SNF8YPL002C DIM1P41819 318 aaKnown RBP3.29□□□□□ -1.88
SNF8YPL002C YJR011CP47086 261 aaPredicted RBP3.29□□□□□ -1.88
SNF8YPL002C YNR048WP53740 393 aa3.29□□□□□ -1.88
SNF8YPL002C CAF40P53829 373 aa3.29□□□□□ -1.88
SNF8YPL002C YNL033WP53964 284 aa3.29□□□□□ -1.88
SNF8YPL002C YNL019CP53975 284 aa3.29□□□□□ -1.88
SNF8YPL002C APS2Q00381 147 aa3.29□□□□□ -1.88
SNF8YPL002C OST6Q03723 332 aa3.29□□□□□ -1.88
SNF8YPL002C AIM36Q03798 255 aa3.29□□□□□ -1.88
SNF8YPL002C UTP15Q04305 513 aaKnown RBP3.29□□□□□ -1.88
SNF8YPL002C YMR253CQ04835 414 aa3.29□□□□□ -1.88
SNF8YPL002C NOC4Q06512 552 aaPredicted RBP3.29□□□□□ -1.88
SNF8YPL002C BER1Q06688 274 aaKnown RBP3.29□□□□□ -1.88
SNF8YPL002C YPL257WQ08974 193 aa3.29□□□□□ -1.88
SNF8YPL002C MES1P00958 751 aaKnown RBP3.28□□□□□ -1.88
SNF8YPL002C SGA1P08019 549 aa3.28□□□□□ -1.88
SNF8YPL002C CUP2P15315 225 aa3.28□□□□□ -1.88
SNF8YPL002C PHO85P17157 305 aa3.28□□□□□ -1.88
SNF8YPL002C SEC22P22214 214 aa3.28□□□□□ -1.88
SNF8YPL002C HOM6P31116 359 aaKnown RBP3.28□□□□□ -1.88
SNF8YPL002C MRPL24P36525 258 aaPredicted RBP3.28□□□□□ -1.88
SNF8YPL002C YPT31P38555 223 aaKnown RBP3.28□□□□□ -1.88
SNF8YPL002C IPI1P38803 334 aaPredicted RBP3.28□□□□□ -1.88
SNF8YPL002C MDM31P38880 579 aa3.28□□□□□ -1.88
SNF8YPL002C RRG9P40156 214 aa3.28□□□□□ -1.88
SNF8YPL002C RFC2P40348 353 aa3.28□□□□□ -1.88
SNF8YPL002C SOL1P50278 321 aa3.28□□□□□ -1.88
SNF8YPL002C RSM27P53305 110 aa3.28□□□□□ -1.88
SNF8YPL002C BOR1P53838 576 aa3.28□□□□□ -1.88
SNF8YPL002C RNH201P53942 307 aa3.28□□□□□ -1.88
SNF8YPL002C YPL067CQ02754 198 aa3.28□□□□□ -1.88
SNF8YPL002C YMR166CQ03829 368 aa3.28□□□□□ -1.88
SNF8YPL002C YMR315WQ04869 349 aaKnown RBP3.28□□□□□ -1.88
SNF8YPL002C COA4Q05809 96 aa3.28□□□□□ -1.88
SNF8YPL002C SFH1Q06168 426 aa3.28□□□□□ -1.88
SNF8YPL002C FCF2Q12035 217 aaPredicted RBP3.28□□□□□ -1.88
SNF8YPL002C PST2Q12335 198 aaKnown RBP3.28□□□□□ -1.88
SNF8YPL002C YMR105W-AQ8TGS8 64 aa3.28□□□□□ -1.88
SNF8YPL002C YLL053CP0CD98 152 aa3.27□□□□□ -1.89
SNF8YPL002C DDI2P0CH63 225 aa3.27□□□□□ -1.89
SNF8YPL002C DDI3P0CH64 225 aa3.27□□□□□ -1.89
SNF8YPL002C RPL30P14120 105 aaKnown RBP3.27□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 107.8 ms