RNA–Protein interactions for RNA: YMR005W

TAF4, Transcript of TFIID subunit (48 kDa), yeastyeast

Gene TAF4, Length 1,167 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TAF4YMR005W COQ1P18900 473 aa2.39□□□□□ -2.03
TAF4YMR005W TCA17P32613 152 aa2.39□□□□□ -2.03
TAF4YMR005W SKG1P36169 355 aa2.39□□□□□ -2.03
TAF4YMR005W MRPL17P36528 281 aa2.39□□□□□ -2.03
TAF4YMR005W YRB1P41920 201 aaKnown RBP2.39□□□□□ -2.03
TAF4YMR005W YKL183C-AQ3E765 70 aa2.39□□□□□ -2.03
TAF4YMR005W FLO1P32768 1537 aa2.38□□□□□ -2.03
TAF4YMR005W NHP6BP11633 99 aaKnown RBP2.38□□□□□ -2.03
TAF4YMR005W FPR1P20081 114 aaKnown RBP2.38□□□□□ -2.03
TAF4YMR005W ECM29P38737 1868 aa2.38□□□□□ -2.03
TAF4YMR005W YNR077CP53758 84 aa2.38□□□□□ -2.03
TAF4YMR005W NUP49Q02199 472 aa2.38□□□□□ -2.03
TAF4YMR005W RPL2AP0CX45 254 aaKnown RBP2.37□□□□□ -2.03
TAF4YMR005W RPL2BP0CX46 254 aaKnown RBP2.37□□□□□ -2.03
TAF4YMR005W SNC2P33328 115 aa2.37□□□□□ -2.03
TAF4YMR005W TCD1P38756 429 aa2.37□□□□□ -2.03
TAF4YMR005W GAA1P39012 614 aa2.37□□□□□ -2.03
TAF4YMR005W ERG28P40030 148 aa2.37□□□□□ -2.03
TAF4YMR005W NKP2Q06162 153 aa2.37□□□□□ -2.03
TAF4YMR005W YDR524C-BQ3E6R4 66 aa2.37□□□□□ -2.03
TAF4YMR005W PBN1P25580 416 aa2.36□□□□□ -2.03
TAF4YMR005W SEC17P32602 292 aa2.36□□□□□ -2.03
TAF4YMR005W MCP1Q12106 302 aa2.36□□□□□ -2.03
TAF4YMR005W JLP1Q12358 412 aa2.36□□□□□ -2.03
TAF4YMR005W TIM9O74700 87 aa2.35□□□□□ -2.03
TAF4YMR005W UPS2P35200 230 aa2.35□□□□□ -2.03
TAF4YMR005W TMA19P35691 167 aaKnown RBP2.35□□□□□ -2.03
TAF4YMR005W SIP3P38717 1229 aa2.35□□□□□ -2.03
TAF4YMR005W ADO1P47143 340 aaKnown RBP2.35□□□□□ -2.03
TAF4YMR005W MGA1P53050 456 aa2.35□□□□□ -2.03
TAF4YMR005W SAY1P53324 424 aa2.35□□□□□ -2.03
TAF4YMR005W YMR321CQ04898 105 aa2.35□□□□□ -2.03
TAF4YMR005W TUS1Q06412 1307 aa2.35□□□□□ -2.03
TAF4YMR005W MAK31P23059 88 aa2.34□□□□□ -2.03
TAF4YMR005W UTP30P36144 274 aaKnown RBP2.34□□□□□ -2.03
TAF4YMR005W GVP36P40531 326 aaKnown RBP2.34□□□□□ -2.03
TAF4YMR005W SMD2Q06217 110 aaKnown RBP2.34□□□□□ -2.03
TAF4YMR005W ANT1Q06497 328 aa2.34□□□□□ -2.03
TAF4YMR005W MYO1P08964 1928 aa2.34□□□□□ -2.04
TAF4YMR005W UBR2Q07963 1872 aa2.33□□□□□ -2.04
TAF4YMR005W GPA2P10823 449 aa2.33□□□□□ -2.04
TAF4YMR005W PRX1P34227 261 aaKnown RBP2.33□□□□□ -2.04
TAF4YMR005W TVP23P38962 199 aa2.33□□□□□ -2.04
TAF4YMR005W RMD6P39975 231 aa2.33□□□□□ -2.04
TAF4YMR005W YNL194CP40169 301 aa2.33□□□□□ -2.04
TAF4YMR005W MSS2P40990 351 aa2.33□□□□□ -2.04
TAF4YMR005W FSF1Q12029 327 aaKnown RBP2.33□□□□□ -2.04
TAF4YMR005W YDR034W-BQ6Q5X2 51 aa2.33□□□□□ -2.04
TAF4YMR005W GCN3P14741 305 aa2.32□□□□□ -2.04
TAF4YMR005W STE18P18852 110 aa2.32□□□□□ -2.04
TAF4YMR005W CBT1P36038 271 aaPredicted RBP2.32□□□□□ -2.04
TAF4YMR005W GPM2Q12008 311 aa2.32□□□□□ -2.04
TAF4YMR005W YPL162CQ12042 273 aa2.32□□□□□ -2.04
TAF4YMR005W RAD50P12753 1312 aa2.32□□□□□ -2.04
TAF4YMR005W SEC4P07560 215 aaKnown RBP2.31□□□□□ -2.04
TAF4YMR005W IDH1P28834 360 aaKnown RBP RIP-Chip data2.31□□□□□ -2.04not detected
TAF4YMR005W TVP38P36164 337 aa2.31□□□□□ -2.04
TAF4YMR005W AST2P39945 430 aaKnown RBP2.31□□□□□ -2.04
TAF4YMR005W GCN20P43535 752 aaKnown RBP2.31□□□□□ -2.04
TAF4YMR005W IRC18P47056 224 aa2.31□□□□□ -2.04
TAF4YMR005W RAD17P48581 401 aa2.31□□□□□ -2.04
TAF4YMR005W PDR17P53844 350 aa2.31□□□□□ -2.04
TAF4YMR005W RIO1Q12196 484 aaKnown RBP2.31□□□□□ -2.04
TAF4YMR005W RUD3Q12234 484 aaKnown RBP2.31□□□□□ -2.04
TAF4YMR005W KSS1P14681 368 aa2.3□□□□□ -2.04
TAF4YMR005W TFC1P32367 649 aa2.3□□□□□ -2.04
TAF4YMR005W MGM101P32787 269 aaKnown RBP2.3□□□□□ -2.04
TAF4YMR005W PRP18P33411 251 aaPredicted RBP2.3□□□□□ -2.04
TAF4YMR005W HMF1P40037 129 aaKnown RBP2.3□□□□□ -2.04
TAF4YMR005W YGR050CP53231 118 aa2.3□□□□□ -2.04
TAF4YMR005W MOT1P32333 1867 aa2.3□□□□□ -2.04
TAF4YMR005W QCR8P08525 94 aa2.29□□□□□ -2.04
TAF4YMR005W URA5P13298 226 aaKnown RBP2.29□□□□□ -2.04
TAF4YMR005W BET1P22804 142 aa2.29□□□□□ -2.04
TAF4YMR005W YBR209WP38311 105 aa2.29□□□□□ -2.04
TAF4YMR005W ERJ5P43613 295 aaPredicted RBP2.29□□□□□ -2.04
TAF4YMR005W YDR249CQ03787 373 aa2.29□□□□□ -2.04
TAF4YMR005W YHR214C-EQ8TGK0 99 aa2.29□□□□□ -2.04
TAF4YMR005W CDC33P07260 213 aaKnown RBP2.28□□□□□ -2.04
TAF4YMR005W PTM1P32857 523 aa2.28□□□□□ -2.04
TAF4YMR005W PGA2P53903 129 aa2.28□□□□□ -2.04
TAF4YMR005W ATG40Q99325 256 aa2.28□□□□□ -2.04
TAF4YMR005W NUM1Q00402 2748 aa2.28□□□□□ -2.04
TAF4YMR005W YDR157WA0A023PZE8 133 aa2.27□□□□□ -2.05
TAF4YMR005W SHE2P36068 246 aaKnown RBP RIP-Chip data2.27□□□□□ -2.05not detected
TAF4YMR005W YBR285WP38354 144 aa2.27□□□□□ -2.05
TAF4YMR005W CWC23P52868 283 aaPredicted RBP2.27□□□□□ -2.05
TAF4YMR005W POP3P53833 195 aaPredicted RBP2.27□□□□□ -2.05
TAF4YMR005W TOR1P35169 2470 aa2.26□□□□□ -2.05
TAF4YMR005W MATALPHA2P0CY08 210 aa2.26□□□□□ -2.05
TAF4YMR005W HMLALPHA2P0CY09 210 aa2.26□□□□□ -2.05
TAF4YMR005W RME1P32338 300 aaKnown RBP2.26□□□□□ -2.05
TAF4YMR005W OPY1P38271 328 aa2.26□□□□□ -2.05
TAF4YMR005W PET191Q02772 108 aa2.26□□□□□ -2.05
TAF4YMR005W CWC21Q03375 135 aaKnown RBP2.26□□□□□ -2.05
TAF4YMR005W IRA2P19158 3079 aa2.26□□□□□ -2.05
TAF4YMR005W KNH1P50112 268 aa2.25□□□□□ -2.05
TAF4YMR005W CUS2P53830 285 aaPredicted RBP2.25□□□□□ -2.05
TAF4YMR005W LSM7P53905 115 aaKnown RBP2.25□□□□□ -2.05
TAF4YMR005W YFR032C-BQ8TGU2 87 aa2.25□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 54.2 ms