RNA–Protein interactions for RNA: YLR275W

SMD2, Transcript of Core Sm protein Sm D2, yeastyeast

Gene SMD2, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD2YLR275W YJR111CP47148 283 aaKnown RBP1.42□□□□□ -2.18
SMD2YLR275W ARO8P53090 500 aaKnown RBP1.42□□□□□ -2.18
SMD2YLR275W GIM3P53900 129 aa1.42□□□□□ -2.18
SMD2YLR275W YMR099CQ03161 297 aaKnown RBP1.42□□□□□ -2.18
SMD2YLR275W ARO80Q04052 950 aa1.42□□□□□ -2.18
SMD2YLR275W YLR036CQ07986 203 aa1.42□□□□□ -2.18
SMD2YLR275W YOL014WQ08110 124 aa1.42□□□□□ -2.18
SMD2YLR275W YOL024WQ08172 172 aa1.42□□□□□ -2.18
SMD2YLR275W YAR023CD6VPM8 179 aa1.41□□□□□ -2.18
SMD2YLR275W TAH1P25638 111 aaPredicted RBP1.41□□□□□ -2.18
SMD2YLR275W ADE1P27616 306 aa1.41□□□□□ -2.18
SMD2YLR275W ECM4P36156 370 aa1.41□□□□□ -2.18
SMD2YLR275W UBC12P52491 188 aa1.41□□□□□ -2.18
SMD2YLR275W HOP2P53187 214 aa1.41□□□□□ -2.18
SMD2YLR275W YMR295CQ03559 197 aa1.41□□□□□ -2.18
SMD2YLR275W YPR174CQ06616 221 aaPredicted RBP1.41□□□□□ -2.18
SMD2YLR275W YHR007C-AQ07074 71 aa1.41□□□□□ -2.18
SMD2YLR275W YML100W-AQ8TGT0 57 aa1.41□□□□□ -2.18
SMD2YLR275W TRX3P25372 127 aa1.4□□□□□ -2.19
SMD2YLR275W MTW1P39731 289 aa1.4□□□□□ -2.19
SMD2YLR275W YPL073CP40323 161 aa1.4□□□□□ -2.19
SMD2YLR275W NOC4Q06512 552 aaPredicted RBP1.4□□□□□ -2.19
SMD2YLR275W MSB2P32334 1306 aa1.4□□□□□ -2.19
SMD2YLR275W SHG1P38337 142 aa1.39□□□□□ -2.19
SMD2YLR275W YER076CP40049 302 aa1.39□□□□□ -2.19
SMD2YLR275W TMA22P47089 198 aaPredicted RBP1.39□□□□□ -2.19
SMD2YLR275W IRC23Q08416 157 aa1.39□□□□□ -2.19
SMD2YLR275W YDL085C-AQ3E7B7 68 aaKnown RBP1.39□□□□□ -2.19
SMD2YLR275W YNL146C-AQ3E7Z1 64 aa1.39□□□□□ -2.19
SMD2YLR275W TDA4P47153 279 aa1.38□□□□□ -2.19
SMD2YLR275W MPA43P53583 542 aaPredicted RBP1.38□□□□□ -2.19
SMD2YLR275W SHH3Q04487 196 aa1.38□□□□□ -2.19
SMD2YLR275W YMR315WQ04869 349 aaKnown RBP1.38□□□□□ -2.19
SMD2YLR275W GRX8Q05926 109 aa1.38□□□□□ -2.19
SMD2YLR275W CYR1P08678 2026 aaKnown RBP1.37□□□□□ -2.19
SMD2YLR275W MDM35O60200 86 aa1.37□□□□□ -2.19
SMD2YLR275W RIO2P40160 425 aaKnown RBP1.37□□□□□ -2.19
SMD2YLR275W NRK1P53915 240 aa1.37□□□□□ -2.19
SMD2YLR275W UBC7Q02159 165 aa1.37□□□□□ -2.19
SMD2YLR275W AIM34Q03673 198 aa1.37□□□□□ -2.19
SMD2YLR275W YPR014CQ6B0W2 109 aa1.37□□□□□ -2.19
SMD2YLR275W NSP1P14907 823 aaKnown RBP1.36□□□□□ -2.19
SMD2YLR275W MGT1P26188 188 aa1.36□□□□□ -2.19
SMD2YLR275W ATP7P30902 174 aa1.36□□□□□ -2.19
SMD2YLR275W FMP23P38231 175 aa1.36□□□□□ -2.19
SMD2YLR275W CUP9P41817 306 aa1.36□□□□□ -2.19
SMD2YLR275W VPS71Q03433 280 aa1.36□□□□□ -2.19
SMD2YLR275W RCE1Q03530 315 aa1.36□□□□□ -2.19
SMD2YLR275W NAT3Q06504 195 aa1.36□□□□□ -2.19
SMD2YLR275W YET3Q07451 203 aa1.36□□□□□ -2.19
SMD2YLR275W TIR1P10863 254 aa1.35□□□□□ -2.19
SMD2YLR275W PAM17P36147 197 aa1.35□□□□□ -2.19
SMD2YLR275W FLX1P40464 311 aa1.35□□□□□ -2.19
SMD2YLR275W YFL019CP43576 117 aa1.35□□□□□ -2.19
SMD2YLR275W PGA1P53896 198 aa1.35□□□□□ -2.19
SMD2YLR275W SNO1Q03144 224 aa1.35□□□□□ -2.19
SMD2YLR275W YMR253CQ04835 414 aa1.35□□□□□ -2.19
SMD2YLR275W ATG38Q05789 226 aaKnown RBP1.35□□□□□ -2.19
SMD2YLR275W PRP11Q07350 266 aaPredicted RBP1.35□□□□□ -2.19
SMD2YLR275W YPR013CQ12145 317 aa1.35□□□□□ -2.19
SMD2YLR275W YOR342CQ12182 319 aa1.35□□□□□ -2.19
SMD2YLR275W RPS24AP0CX31 135 aaKnown RBP1.34□□□□□ -2.19
SMD2YLR275W RPS24BP0CX32 135 aaKnown RBP1.34□□□□□ -2.19
SMD2YLR275W AHC2P25649 128 aa1.34□□□□□ -2.19
SMD2YLR275W YHL018WP38744 120 aaPredicted RBP1.34□□□□□ -2.19
SMD2YLR275W FMP32P43557 207 aa1.34□□□□□ -2.19
SMD2YLR275W YAE1P47118 141 aaPredicted RBP1.34□□□□□ -2.19
SMD2YLR275W DAD4P69851 72 aa1.34□□□□□ -2.19
SMD2YLR275W RNH202Q05635 350 aa1.34□□□□□ -2.19
SMD2YLR275W BRX1Q08235 291 aaKnown RBP1.34□□□□□ -2.19
SMD2YLR275W GCY1P14065 312 aaKnown RBP RIP-Chip data1.33□□□□□ -2.2not detected
SMD2YLR275W PHO85P17157 305 aa1.33□□□□□ -2.2
SMD2YLR275W NSG1P38837 291 aa1.33□□□□□ -2.2
SMD2YLR275W SEC72P39742 193 aaKnown RBP1.33□□□□□ -2.2
SMD2YLR275W EDC3P39998 551 aaKnown RBP1.33□□□□□ -2.2
SMD2YLR275W SPC25P40014 221 aa1.33□□□□□ -2.2
SMD2YLR275W HYR1P40581 163 aaKnown RBP1.33□□□□□ -2.2
SMD2YLR275W YNL247WP53852 767 aaKnown RBP1.33□□□□□ -2.2
SMD2YLR275W YNL033WP53964 284 aa1.33□□□□□ -2.2
SMD2YLR275W CWC27Q02770 301 aa1.33□□□□□ -2.2
SMD2YLR275W DIG2Q03373 323 aaKnown RBP1.33□□□□□ -2.2
SMD2YLR275W SHH4Q06236 168 aa1.33□□□□□ -2.2
SMD2YLR275W MPD1Q12404 318 aaKnown RBP1.33□□□□□ -2.2
SMD2YLR275W YLR412C-AQ3E742 68 aa1.33□□□□□ -2.2
SMD2YLR275W COX8P04039 78 aa1.32□□□□□ -2.2
SMD2YLR275W IDP1P21954 428 aaKnown RBP1.32□□□□□ -2.2
SMD2YLR275W GPI14P47088 403 aaKnown RBP1.32□□□□□ -2.2
SMD2YLR275W FIT2Q08906 153 aa1.32□□□□□ -2.2
SMD2YLR275W SEC14P24280 304 aaKnown RBP1.31□□□□□ -2.2
SMD2YLR275W ARO7P32178 256 aa1.31□□□□□ -2.2
SMD2YLR275W GSP2P32836 220 aaKnown RBP1.31□□□□□ -2.2
SMD2YLR275W SFK1P35735 353 aa1.31□□□□□ -2.2
SMD2YLR275W YKR041WP36134 250 aa1.31□□□□□ -2.2
SMD2YLR275W POG1P40473 351 aa1.31□□□□□ -2.2
SMD2YLR275W YFH7P43591 353 aa1.31□□□□□ -2.2
SMD2YLR275W SBH1P52870 82 aa1.31□□□□□ -2.2
SMD2YLR275W GRE1Q08969 168 aa1.31□□□□□ -2.2
SMD2YLR275W VAR1P02381 398 aa1.3□□□□□ -2.2
SMD2YLR275W TRR1P29509 319 aaKnown RBP1.3□□□□□ -2.2
SMD2YLR275W YKL102CP34249 101 aa1.3□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms