RNA–Protein interactions for RNA: YLR135W

SLX4, Transcript of Endonuclease involved in processing DNA, yeast

Gene SLX4, Length 2,247 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLX4	YLR135W	YNL247W	P53852	767 aa	Known RBP	0.87	□□□□□ -2.27
SLX4	YLR135W	PGA1	P53896	198 aa		0.87	□□□□□ -2.27
SLX4	YLR135W	HPT1	Q04178	221 aa	Known RBP	0.87	□□□□□ -2.27
SLX4	YLR135W	GRX8	Q05926	109 aa		0.87	□□□□□ -2.27
SLX4	YLR135W	DGA1	Q08650	418 aa		0.87	□□□□□ -2.27
SLX4	YLR135W	TFC1	P32367	649 aa		0.86	□□□□□ -2.27
SLX4	YLR135W	YBR209W	P38311	105 aa		0.86	□□□□□ -2.27
SLX4	YLR135W	NVJ1	P38881	321 aa		0.86	□□□□□ -2.27
SLX4	YLR135W	GAA1	P39012	614 aa		0.86	□□□□□ -2.27
SLX4	YLR135W	MTW1	P39731	289 aa		0.86	□□□□□ -2.27
SLX4	YLR135W	LSM4	P40070	187 aa	Known RBP	0.86	□□□□□ -2.27
SLX4	YLR135W	YJR111C	P47148	283 aa	Known RBP	0.86	□□□□□ -2.27
SLX4	YLR135W	MPC3	P53311	146 aa		0.86	□□□□□ -2.27
SLX4	YLR135W	YIP3	P53633	176 aa		0.86	□□□□□ -2.27
SLX4	YLR135W	POP3	P53833	195 aa	Predicted RBP	0.86	□□□□□ -2.27
SLX4	YLR135W	YNL140C	P53910	189 aa		0.86	□□□□□ -2.27
SLX4	YLR135W	BUD25	P85052	153 aa		0.86	□□□□□ -2.27
SLX4	YLR135W	SML1	Q04964	104 aa		0.86	□□□□□ -2.27
SLX4	YLR135W	MPD1	Q12404	318 aa	Known RBP	0.86	□□□□□ -2.27
SLX4	YLR135W	YHR086W-A	Q3E746	53 aa		0.86	□□□□□ -2.27
SLX4	YLR135W	SPO13	P23624	291 aa		0.85	□□□□□ -2.27
SLX4	YLR135W	AHC2	P25649	128 aa		0.85	□□□□□ -2.27
SLX4	YLR135W	TMA19	P35691	167 aa	Known RBP	0.85	□□□□□ -2.27
SLX4	YLR135W	YER135C	P40082	130 aa		0.85	□□□□□ -2.27
SLX4	YLR135W	EAF6	P47128	113 aa		0.85	□□□□□ -2.27
SLX4	YLR135W	AIM34	Q03673	198 aa		0.85	□□□□□ -2.27
SLX4	YLR135W	SHH4	Q06236	168 aa		0.85	□□□□□ -2.27
SLX4	YLR135W	ANT1	Q06497	328 aa		0.85	□□□□□ -2.27
SLX4	YLR135W	NAT3	Q06504	195 aa		0.85	□□□□□ -2.27
SLX4	YLR135W	GRE1	Q08969	168 aa		0.85	□□□□□ -2.27
SLX4	YLR135W	YLR050C	Q12155	161 aa	Known RBP	0.85	□□□□□ -2.27
SLX4	YLR135W	YLR412C-A	Q3E742	68 aa		0.85	□□□□□ -2.27
SLX4	YLR135W	YPR014C	Q6B0W2	109 aa		0.85	□□□□□ -2.27
SLX4	YLR135W	YLR236C	A0A023PZG4	107 aa		0.85	□□□□□ -2.27
SLX4	YLR135W	POR1	P04840	283 aa	Known RBP	0.85	□□□□□ -2.27
SLX4	YLR135W	TRX3	P25372	127 aa		0.85	□□□□□ -2.27
SLX4	YLR135W	ECM4	P36156	370 aa		0.85	□□□□□ -2.27
SLX4	YLR135W	TVP38	P36164	337 aa		0.85	□□□□□ -2.27
SLX4	YLR135W	FES1	P38260	290 aa		0.85	□□□□□ -2.27
SLX4	YLR135W	NSG1	P38837	291 aa		0.85	□□□□□ -2.27
SLX4	YLR135W	GPI17	Q04080	534 aa		0.85	□□□□□ -2.27
SLX4	YLR135W	CUE4	Q04201	117 aa	Predicted RBP	0.85	□□□□□ -2.27
SLX4	YLR135W	RPS24A	P0CX31	135 aa	Known RBP	0.84	□□□□□ -2.27
SLX4	YLR135W	RPS24B	P0CX32	135 aa	Known RBP	0.84	□□□□□ -2.27
SLX4	YLR135W	SEC14	P24280	304 aa	Known RBP	0.84	□□□□□ -2.27
SLX4	YLR135W	YFL019C	P43576	117 aa		0.84	□□□□□ -2.27
SLX4	YLR135W	KNH1	P50112	268 aa		0.84	□□□□□ -2.27
SLX4	YLR135W	SAY1	P53324	424 aa		0.84	□□□□□ -2.27
SLX4	YLR135W	YMR295C	Q03559	197 aa		0.84	□□□□□ -2.27
SLX4	YLR135W	MET5	P47169	1442 aa		0.84	□□□□□ -2.27
SLX4	YLR135W	CYR1	P08678	2026 aa	Known RBP	0.84	□□□□□ -2.28
SLX4	YLR135W	SEC11	P15367	167 aa		0.84	□□□□□ -2.28
SLX4	YLR135W	YKL102C	P34249	101 aa		0.84	□□□□□ -2.28
SLX4	YLR135W	VMA22	P38784	181 aa		0.84	□□□□□ -2.28
SLX4	YLR135W	SRP14	P38985	146 aa		0.84	□□□□□ -2.28
SLX4	YLR135W	YER076C	P40049	302 aa		0.84	□□□□□ -2.28
SLX4	YLR135W	ERJ5	P43613	295 aa	Predicted RBP	0.84	□□□□□ -2.28
SLX4	YLR135W	PLP1	Q04004	230 aa		0.84	□□□□□ -2.28
SLX4	YLR135W	YLR162W	Q06235	118 aa		0.84	□□□□□ -2.28
SLX4	YLR135W	BRX1	Q08235	291 aa	Known RBP	0.84	□□□□□ -2.28
SLX4	YLR135W	YOR342C	Q12182	319 aa		0.84	□□□□□ -2.28
SLX4	YLR135W	DGK1	Q12382	290 aa		0.84	□□□□□ -2.28
SLX4	YLR135W	YML100W-A	Q8TGT0	57 aa		0.84	□□□□□ -2.28
SLX4	YLR135W	IDP1	P21954	428 aa	Known RBP	0.83	□□□□□ -2.28
SLX4	YLR135W	RFC2	P40348	353 aa		0.83	□□□□□ -2.28
SLX4	YLR135W	GPI14	P47088	403 aa	Known RBP	0.83	□□□□□ -2.28
SLX4	YLR135W	XPT1	P47165	209 aa		0.83	□□□□□ -2.28
SLX4	YLR135W	DAD4	P69851	72 aa		0.83	□□□□□ -2.28
SLX4	YLR135W	VPS71	Q03433	280 aa		0.83	□□□□□ -2.28
SLX4	YLR135W	SHH3	Q04487	196 aa		0.83	□□□□□ -2.28
SLX4	YLR135W	YOL014W	Q08110	124 aa		0.83	□□□□□ -2.28
SLX4	YLR135W	YDL180W	Q12301	547 aa		0.83	□□□□□ -2.28
SLX4	YLR135W	TIR1	P10863	254 aa		0.83	□□□□□ -2.28
SLX4	YLR135W	ARC19	P33204	171 aa	Known RBP	0.83	□□□□□ -2.28
SLX4	YLR135W	YBR219C	P38317	127 aa		0.83	□□□□□ -2.28
SLX4	YLR135W	YER121W	P40076	114 aa		0.83	□□□□□ -2.28
SLX4	YLR135W	YNL200C	P40165	246 aa	Known RBP	0.83	□□□□□ -2.28
SLX4	YLR135W	TTI2	P47168	421 aa		0.83	□□□□□ -2.28
SLX4	YLR135W	BAT2	P47176	376 aa	Known RBP	0.83	□□□□□ -2.28
SLX4	YLR135W	YMR099C	Q03161	297 aa	Known RBP	0.83	□□□□□ -2.28
SLX4	YLR135W	RAD28	Q12021	506 aa		0.83	□□□□□ -2.28
SLX4	YLR135W	PEX11	Q12462	236 aa		0.83	□□□□□ -2.28
SLX4	YLR135W	CMD1	P06787	147 aa	Known RBP	0.82	□□□□□ -2.28
SLX4	YLR135W	YGL010W	P25338	174 aa		0.82	□□□□□ -2.28
SLX4	YLR135W	NUF2	P33895	451 aa		0.82	□□□□□ -2.28
SLX4	YLR135W	UPS2	P35200	230 aa		0.82	□□□□□ -2.28
SLX4	YLR135W	SPC25	P40014	221 aa		0.82	□□□□□ -2.28
SLX4	YLR135W	RPL13B	P40212	199 aa	Known RBP	0.82	□□□□□ -2.28
SLX4	YLR135W	CUP9	P41817	306 aa		0.82	□□□□□ -2.28
SLX4	YLR135W	MPA43	P53583	542 aa	Predicted RBP	0.82	□□□□□ -2.28
SLX4	YLR135W	SMD2	Q06217	110 aa	Known RBP	0.82	□□□□□ -2.28
SLX4	YLR135W	YPR127W	Q06494	345 aa		0.82	□□□□□ -2.28
SLX4	YLR135W	IRC23	Q08416	157 aa		0.82	□□□□□ -2.28
SLX4	YLR135W	RPL13A	Q12690	199 aa	Predicted RBP	0.82	□□□□□ -2.28
SLX4	YLR135W	YKR045C	P36138	183 aa		0.81	□□□□□ -2.28
SLX4	YLR135W	YBR220C	P38318	560 aa		0.81	□□□□□ -2.28
SLX4	YLR135W	FYV4	P38783	130 aa	Predicted RBP	0.81	□□□□□ -2.28
SLX4	YLR135W	NSA2	P40078	261 aa	Known RBP	0.81	□□□□□ -2.28
SLX4	YLR135W	HSK3	P69852	69 aa		0.81	□□□□□ -2.28
SLX4	YLR135W	MZM1	Q03429	123 aa	Predicted RBP	0.81	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 276.2 ms