RNA–Protein interactions for RNA: YJL194W

CDC6, Transcript of Essential ATP-binding protein required for DNA replication, yeastyeast

Gene CDC6, Length 1,542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC6YJL194W DIM1P41819 318 aaKnown RBP3.55□□□□□ -1.84
CDC6YJL194W UFD1P53044 361 aa3.55□□□□□ -1.84
CDC6YJL194W COF1Q03048 143 aaKnown RBP3.55□□□□□ -1.84
CDC6YJL194W VHS1Q03785 461 aa3.55□□□□□ -1.84
CDC6YJL194W FMP42Q04991 504 aa3.55□□□□□ -1.84
CDC6YJL194W PAL1Q05518 499 aaKnown RBP3.55□□□□□ -1.84
CDC6YJL194W YHC1Q05900 231 aaKnown RBP3.55□□□□□ -1.84
CDC6YJL194W CNL1Q06333 122 aa3.55□□□□□ -1.84
CDC6YJL194W THP3Q12049 470 aaKnown RBP3.55□□□□□ -1.84
CDC6YJL194W TSC3Q3E790 80 aa3.55□□□□□ -1.84
CDC6YJL194W YPL229WQ99395 206 aa3.55□□□□□ -1.84
CDC6YJL194W TRP1P00912 224 aa3.54□□□□□ -1.84
CDC6YJL194W CDC7P06243 507 aa3.54□□□□□ -1.84
CDC6YJL194W CPR1P14832 162 aaKnown RBP3.54□□□□□ -1.84
CDC6YJL194W STP22P25604 385 aa3.54□□□□□ -1.84
CDC6YJL194W SUI1P32911 108 aaKnown RBP3.54□□□□□ -1.84
CDC6YJL194W YPT53P36019 220 aa3.54□□□□□ -1.84
CDC6YJL194W SHE2P36068 246 aaKnown RBP RIP-Chip data3.54□□□□□ -1.84not detected
CDC6YJL194W YGP1P38616 354 aaKnown RBP3.54□□□□□ -1.84
CDC6YJL194W CFD1P40558 293 aa3.54□□□□□ -1.84
CDC6YJL194W ARO8P53090 500 aaKnown RBP3.54□□□□□ -1.84
CDC6YJL194W YDR366CP87287 132 aa3.54□□□□□ -1.84
CDC6YJL194W YMR254CQ04838 102 aa3.54□□□□□ -1.84
CDC6YJL194W IES4Q08561 116 aa3.54□□□□□ -1.84
CDC6YJL194W FKS3Q04952 1785 aa3.54□□□□□ -1.84
CDC6YJL194W PRE7P23724 241 aaKnown RBP3.54□□□□□ -1.84
CDC6YJL194W YCR025CP25352 136 aa3.54□□□□□ -1.84
CDC6YJL194W MRP49P32388 137 aa3.54□□□□□ -1.84
CDC6YJL194W PAN3P36102 679 aaPredicted RBP3.54□□□□□ -1.84
CDC6YJL194W SMP1P38128 452 aa3.54□□□□□ -1.84
CDC6YJL194W YPL073CP40323 161 aa3.54□□□□□ -1.84
CDC6YJL194W YIL024CP40543 189 aa3.54□□□□□ -1.84
CDC6YJL194W GLR1P41921 483 aaKnown RBP3.54□□□□□ -1.84
CDC6YJL194W BIR1P47134 954 aa3.54□□□□□ -1.84
CDC6YJL194W RNH201P53942 307 aa3.54□□□□□ -1.84
CDC6YJL194W SAE3P89114 91 aa3.54□□□□□ -1.84
CDC6YJL194W YMR320WQ04897 101 aa3.54□□□□□ -1.84
CDC6YJL194W YOR214CQ12282 236 aa3.54□□□□□ -1.84
CDC6YJL194W RPL15AP05748 204 aaKnown RBP3.53□□□□□ -1.84
CDC6YJL194W RPL30P14120 105 aaKnown RBP3.53□□□□□ -1.84
CDC6YJL194W BGL2P15703 313 aaKnown RBP3.53□□□□□ -1.84
CDC6YJL194W CKS1P20486 150 aaKnown RBP3.53□□□□□ -1.84
CDC6YJL194W SPO13P23624 291 aa3.53□□□□□ -1.84
CDC6YJL194W UTP30P36144 274 aaKnown RBP3.53□□□□□ -1.84
CDC6YJL194W YER186CP40101 306 aa3.53□□□□□ -1.84
CDC6YJL194W DLS1P40366 167 aa3.53□□□□□ -1.84
CDC6YJL194W YGR050CP53231 118 aa3.53□□□□□ -1.84
CDC6YJL194W PGA1P53896 198 aa3.53□□□□□ -1.84
CDC6YJL194W YNL010WP53981 241 aaKnown RBP3.53□□□□□ -1.84
CDC6YJL194W RPL15BP54780 204 aaPredicted RBP3.53□□□□□ -1.84
CDC6YJL194W TSA2Q04120 196 aa3.53□□□□□ -1.84
CDC6YJL194W YTH1Q06102 208 aaPredicted RBP3.53□□□□□ -1.84
CDC6YJL194W ATX2Q12067 313 aa3.53□□□□□ -1.84
CDC6YJL194W FCY1Q12178 158 aa3.53□□□□□ -1.84
CDC6YJL194W YOR342CQ12182 319 aa3.53□□□□□ -1.84
CDC6YJL194W PHO2P07269 559 aa3.52□□□□□ -1.85
CDC6YJL194W CNB1P25296 175 aa3.52□□□□□ -1.85
CDC6YJL194W ERG2P32352 222 aa3.52□□□□□ -1.85
CDC6YJL194W UGX2P32772 223 aa3.52□□□□□ -1.85
CDC6YJL194W YHI9P38765 294 aa3.52□□□□□ -1.85
CDC6YJL194W TIM17P39515 158 aa3.52□□□□□ -1.85
CDC6YJL194W SNM1P40993 198 aa3.52□□□□□ -1.85
CDC6YJL194W YFR054CP43622 192 aa3.52□□□□□ -1.85
CDC6YJL194W YGR017WP53210 297 aa3.52□□□□□ -1.85
CDC6YJL194W YGR039WP53225 103 aa3.52□□□□□ -1.85
CDC6YJL194W SLM2P53955 656 aa3.52□□□□□ -1.85
CDC6YJL194W YPR011CQ12251 326 aa3.52□□□□□ -1.85
CDC6YJL194W PRR2Q12310 699 aa3.52□□□□□ -1.85
CDC6YJL194W TDA8Q6B2U8 126 aa3.52□□□□□ -1.85
CDC6YJL194W HTL1Q9URQ5 78 aa3.52□□□□□ -1.85
CDC6YJL194W SEC17P32602 292 aa3.51□□□□□ -1.85
CDC6YJL194W SKG1P36169 355 aa3.51□□□□□ -1.85
CDC6YJL194W MRPL17P36528 281 aa3.51□□□□□ -1.85
CDC6YJL194W AIM2P39721 246 aa3.51□□□□□ -1.85
CDC6YJL194W PRM5P40476 318 aa3.51□□□□□ -1.85
CDC6YJL194W ARP3P47117 449 aaKnown RBP3.51□□□□□ -1.85
CDC6YJL194W YGL262WP53054 175 aa3.51□□□□□ -1.85
CDC6YJL194W FMP48P53233 369 aa3.51□□□□□ -1.85
CDC6YJL194W ALG9P53868 555 aaKnown RBP3.51□□□□□ -1.85
CDC6YJL194W YMR099CQ03161 297 aaKnown RBP3.51□□□□□ -1.85
CDC6YJL194W THI74Q04083 370 aa3.51□□□□□ -1.85
CDC6YJL194W YLR179CQ06252 201 aaKnown RBP3.51□□□□□ -1.85
CDC6YJL194W SLD7Q08457 257 aa3.51□□□□□ -1.85
CDC6YJL194W CRC1Q12289 327 aa3.51□□□□□ -1.85
CDC6YJL194W PSF1Q12488 208 aa3.51□□□□□ -1.85
CDC6YJL194W YNL162W-AQ3E7A8 72 aa3.51□□□□□ -1.85
CDC6YJL194W DDI2P0CH63 225 aa3.5□□□□□ -1.85
CDC6YJL194W DDI3P0CH64 225 aa3.5□□□□□ -1.85
CDC6YJL194W MRS3P10566 314 aa3.5□□□□□ -1.85
CDC6YJL194W PHO85P17157 305 aa3.5□□□□□ -1.85
CDC6YJL194W RPB5P20434 215 aa3.5□□□□□ -1.85
CDC6YJL194W TKL2P33315 681 aa3.5□□□□□ -1.85
CDC6YJL194W ETR1P38071 380 aa3.5□□□□□ -1.85
CDC6YJL194W AVT2P39981 480 aa3.5□□□□□ -1.85
CDC6YJL194W RPE1P46969 238 aa3.5□□□□□ -1.85
CDC6YJL194W YJR085CP47131 105 aaKnown RBP3.5□□□□□ -1.85
CDC6YJL194W XPT1P47165 209 aa3.5□□□□□ -1.85
CDC6YJL194W GAS3Q03655 524 aa3.5□□□□□ -1.85
CDC6YJL194W YPL162CQ12042 273 aa3.5□□□□□ -1.85
CDC6YJL194W AYT1Q12226 474 aa3.5□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms