RNA–Protein interactions for RNA: YGR002C

SWC4, Transcript of Component of the Swr1p complex that incorporates Htz1p into chromatin, yeastyeast

Gene SWC4, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWC4YGR002C IQG1Q12280 1495 aa2.41□□□□□ -2.02
SWC4YGR002C BPT1P14772 1559 aa2.4□□□□□ -2.02
SWC4YGR002C FMP49A0A023PZB3 126 aa2.4□□□□□ -2.03
SWC4YGR002C SOD1P00445 154 aaKnown RBP2.4□□□□□ -2.03
SWC4YGR002C ATP5P09457 212 aa2.4□□□□□ -2.03
SWC4YGR002C HAP3P13434 144 aa2.4□□□□□ -2.03
SWC4YGR002C FMT1P32785 401 aa2.4□□□□□ -2.03
SWC4YGR002C YKR041WP36134 250 aa2.4□□□□□ -2.03
SWC4YGR002C UTP30P36144 274 aaKnown RBP2.4□□□□□ -2.03
SWC4YGR002C IST2P38250 946 aa2.4□□□□□ -2.03
SWC4YGR002C YNL208WP40159 199 aaKnown RBP2.4□□□□□ -2.03
SWC4YGR002C DLS1P40366 167 aa2.4□□□□□ -2.03
SWC4YGR002C YIR035CP40579 254 aa2.4□□□□□ -2.03
SWC4YGR002C MRPL49P40858 161 aaPredicted RBP2.4□□□□□ -2.03
SWC4YGR002C YFL064CP43540 174 aa2.4□□□□□ -2.03
SWC4YGR002C GNA1P43577 159 aaPredicted RBP2.4□□□□□ -2.03
SWC4YGR002C YGL230CP53074 147 aa2.4□□□□□ -2.03
SWC4YGR002C GOT1Q03554 138 aa2.4□□□□□ -2.03
SWC4YGR002C MRX8Q05473 314 aa2.4□□□□□ -2.03
SWC4YGR002C MCP1Q12106 302 aa2.4□□□□□ -2.03
SWC4YGR002C PCL9Q12477 304 aa2.4□□□□□ -2.03
SWC4YGR002C PRM4Q12498 284 aa2.4□□□□□ -2.03
SWC4YGR002C COA6Q3E846 104 aa2.4□□□□□ -2.03
SWC4YGR002C YPR014CQ6B0W2 109 aa2.4□□□□□ -2.03
SWC4YGR002C POL1P13382 1468 aa2.4□□□□□ -2.03
SWC4YGR002C ESC1Q03661 1658 aaKnown RBP2.4□□□□□ -2.03
SWC4YGR002C PDR11P40550 1411 aa2.39□□□□□ -2.03
SWC4YGR002C ADK1P07170 222 aaKnown RBP2.39□□□□□ -2.03
SWC4YGR002C SRP21P32342 167 aa2.39□□□□□ -2.03
SWC4YGR002C QRI5P32344 111 aa2.39□□□□□ -2.03
SWC4YGR002C TOA2P32774 122 aa2.39□□□□□ -2.03
SWC4YGR002C YKL187CP34231 750 aa2.39□□□□□ -2.03
SWC4YGR002C KTI12P34253 313 aaKnown RBP2.39□□□□□ -2.03
SWC4YGR002C YET1P35723 206 aa2.39□□□□□ -2.03
SWC4YGR002C SHB17P36136 271 aaKnown RBP2.39□□□□□ -2.03
SWC4YGR002C YHL044WP38727 235 aa2.39□□□□□ -2.03
SWC4YGR002C YHR130CP38834 111 aa2.39□□□□□ -2.03
SWC4YGR002C RPL13BP40212 199 aaKnown RBP2.39□□□□□ -2.03
SWC4YGR002C YNL010WP53981 241 aaKnown RBP2.39□□□□□ -2.03
SWC4YGR002C TSA2Q04120 196 aa2.39□□□□□ -2.03
SWC4YGR002C SFH1Q06168 426 aa2.39□□□□□ -2.03
SWC4YGR002C SWC7Q06707 132 aa2.39□□□□□ -2.03
SWC4YGR002C SCP1Q08873 200 aa2.39□□□□□ -2.03
SWC4YGR002C RPL13AQ12690 199 aaPredicted RBP2.39□□□□□ -2.03
SWC4YGR002C YGL194C-AQ2V2P6 80 aa2.39□□□□□ -2.03
SWC4YGR002C TY1B-PR2P0C2J0 1756 aa2.38□□□□□ -2.03
SWC4YGR002C ROM2P51862 1356 aaKnown RBP2.38□□□□□ -2.03
SWC4YGR002C COX5AP00424 153 aa2.38□□□□□ -2.03
SWC4YGR002C STE7P06784 515 aa2.38□□□□□ -2.03
SWC4YGR002C YER039C-AP0CD97 72 aa2.38□□□□□ -2.03
SWC4YGR002C YOL163WP0CF20 169 aa2.38□□□□□ -2.03
SWC4YGR002C TFS1P14306 219 aa2.38□□□□□ -2.03
SWC4YGR002C HSP26P15992 214 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
SWC4YGR002C MKK1P32490 508 aa2.38□□□□□ -2.03
SWC4YGR002C APS1P35181 156 aa2.38□□□□□ -2.03
SWC4YGR002C MRPL39P36533 70 aa2.38□□□□□ -2.03
SWC4YGR002C TRR2P38816 342 aa2.38□□□□□ -2.03
SWC4YGR002C IPT1P38954 527 aa2.38□□□□□ -2.03
SWC4YGR002C SPC25P40014 221 aa2.38□□□□□ -2.03
SWC4YGR002C KEG1P43614 200 aa2.38□□□□□ -2.03
SWC4YGR002C TTI2P47168 421 aa2.38□□□□□ -2.03
SWC4YGR002C DAN1P47178 298 aa2.38□□□□□ -2.03
SWC4YGR002C UBC12P52491 188 aa2.38□□□□□ -2.03
SWC4YGR002C PRM8P53174 237 aa2.38□□□□□ -2.03
SWC4YGR002C YGL034CP53186 121 aa2.38□□□□□ -2.03
SWC4YGR002C CLD1P53264 445 aa2.38□□□□□ -2.03
SWC4YGR002C YNL033WP53964 284 aa2.38□□□□□ -2.03
SWC4YGR002C YNL019CP53975 284 aa2.38□□□□□ -2.03
SWC4YGR002C HSK3P69852 69 aa2.38□□□□□ -2.03
SWC4YGR002C OSH6Q02201 448 aa2.38□□□□□ -2.03
SWC4YGR002C YML018CQ03730 393 aa2.38□□□□□ -2.03
SWC4YGR002C THI74Q04083 370 aa2.38□□□□□ -2.03
SWC4YGR002C RNH202Q05635 350 aa2.38□□□□□ -2.03
SWC4YGR002C YLR126CQ12288 251 aa2.38□□□□□ -2.03
SWC4YGR002C TY1B-DR1Q03855 1755 aa2.38□□□□□ -2.03
SWC4YGR002C TY1B-DR3Q99231 1755 aa2.38□□□□□ -2.03
SWC4YGR002C SEC4P07560 215 aaKnown RBP2.37□□□□□ -2.03
SWC4YGR002C RPL2AP0CX45 254 aaKnown RBP2.37□□□□□ -2.03
SWC4YGR002C RPL2BP0CX46 254 aaKnown RBP2.37□□□□□ -2.03
SWC4YGR002C BGL2P15703 313 aaKnown RBP2.37□□□□□ -2.03
SWC4YGR002C ERG24P32462 438 aaKnown RBP2.37□□□□□ -2.03
SWC4YGR002C ALK2P32789 676 aaPredicted RBP2.37□□□□□ -2.03
SWC4YGR002C YBR063CP38083 404 aa2.37□□□□□ -2.03
SWC4YGR002C YBR241CP38142 488 aa2.37□□□□□ -2.03
SWC4YGR002C YHL049CP38722 271 aa2.37□□□□□ -2.03
SWC4YGR002C RPB11P38902 120 aa2.37□□□□□ -2.03
SWC4YGR002C GAA1P39012 614 aa2.37□□□□□ -2.03
SWC4YGR002C AVT2P39981 480 aa2.37□□□□□ -2.03
SWC4YGR002C SWM2P40342 146 aa2.37□□□□□ -2.03
SWC4YGR002C YNL320WP42840 284 aa2.37□□□□□ -2.03
SWC4YGR002C YFR054CP43622 192 aa2.37□□□□□ -2.03
SWC4YGR002C GPI2P46961 280 aa2.37□□□□□ -2.03
SWC4YGR002C DIE2P50076 525 aa2.37□□□□□ -2.03
SWC4YGR002C SYF2P53277 215 aaPredicted RBP2.37□□□□□ -2.03
SWC4YGR002C APJ1P53940 528 aa2.37□□□□□ -2.03
SWC4YGR002C YPL067CQ02754 198 aa2.37□□□□□ -2.03
SWC4YGR002C YMR320WQ04897 101 aa2.37□□□□□ -2.03
SWC4YGR002C DGA1Q08650 418 aa2.37□□□□□ -2.03
SWC4YGR002C RDL2Q08742 149 aaKnown RBP2.37□□□□□ -2.03
SWC4YGR002C MMT2Q08970 484 aa2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 52.6 ms