RNA–Protein interactions for RNA: YDR510W

SMT3, Transcript of Ubiquitin-like protein of the SUMO family, yeastyeast

Gene SMT3, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMT3YDR510W AKR2Q12013 749 aa2.42□□□□□ -2.02
SMT3YDR510W YML100W-AQ8TGT0 57 aa2.42□□□□□ -2.02
SMT3YDR510W CDC8P00572 216 aa2.41□□□□□ -2.02
SMT3YDR510W HSP26P15992 214 aaKnown RBP RIP-Chip data2.41□□□□□ -2.02not detected
SMT3YDR510W PCL1P24867 279 aa2.41□□□□□ -2.02
SMT3YDR510W SUA7P29055 345 aaPredicted RBP2.41□□□□□ -2.02
SMT3YDR510W YEL045CP32616 141 aa2.41□□□□□ -2.02
SMT3YDR510W VMA11P32842 164 aa2.41□□□□□ -2.02
SMT3YDR510W PRS3P38689 320 aaKnown RBP2.41□□□□□ -2.02
SMT3YDR510W UBC7Q02159 165 aa2.41□□□□□ -2.02
SMT3YDR510W PIN3Q06449 215 aa2.41□□□□□ -2.02
SMT3YDR510W HRD1Q08109 551 aa2.41□□□□□ -2.02
SMT3YDR510W RAD50P12753 1312 aa2.41□□□□□ -2.02
SMT3YDR510W TIM9O74700 87 aa2.4□□□□□ -2.03
SMT3YDR510W YHR032W-AP0C5N6 59 aa2.4□□□□□ -2.03
SMT3YDR510W CTR2P38865 189 aa2.4□□□□□ -2.03
SMT3YDR510W FCY21P40039 528 aa2.4□□□□□ -2.03
SMT3YDR510W YER134CP40081 178 aa2.4□□□□□ -2.03
SMT3YDR510W YPL073CP40323 161 aa2.4□□□□□ -2.03
SMT3YDR510W YFL019CP43576 117 aa2.4□□□□□ -2.03
SMT3YDR510W ECO1P43605 281 aa2.4□□□□□ -2.03
SMT3YDR510W DSK2P48510 373 aa2.4□□□□□ -2.03
SMT3YDR510W HAL1Q01766 294 aa2.4□□□□□ -2.03
SMT3YDR510W YML122CQ03207 126 aa2.4□□□□□ -2.03
SMT3YDR510W NAT3Q06504 195 aa2.4□□□□□ -2.03
SMT3YDR510W TMC1Q08422 150 aaPredicted RBP2.4□□□□□ -2.03
SMT3YDR510W YLR412C-AQ3E742 68 aa2.4□□□□□ -2.03
SMT3YDR510W SAS5Q99314 248 aa2.4□□□□□ -2.03
SMT3YDR510W HIS3P06633 220 aa2.39□□□□□ -2.03
SMT3YDR510W SCL1P21243 252 aaKnown RBP2.39□□□□□ -2.03
SMT3YDR510W PAN3P36102 679 aaPredicted RBP2.39□□□□□ -2.03
SMT3YDR510W MRPL17P36528 281 aa2.39□□□□□ -2.03
SMT3YDR510W PRE5P40302 234 aaKnown RBP2.39□□□□□ -2.03
SMT3YDR510W YFL012WP43580 148 aa2.39□□□□□ -2.03
SMT3YDR510W CCC1P47818 322 aa2.39□□□□□ -2.03
SMT3YDR510W AIF1P52923 378 aa2.39□□□□□ -2.03
SMT3YDR510W CAB4P53332 305 aa2.39□□□□□ -2.03
SMT3YDR510W TIM8P57744 87 aa2.39□□□□□ -2.03
SMT3YDR510W FMN1Q03778 218 aa2.39□□□□□ -2.03
SMT3YDR510W TSA2Q04120 196 aa2.39□□□□□ -2.03
SMT3YDR510W YTH1Q06102 208 aaPredicted RBP2.39□□□□□ -2.03
SMT3YDR510W YOR268CQ08734 132 aa2.39□□□□□ -2.03
SMT3YDR510W RPO41P13433 1351 aaKnown RBP2.38□□□□□ -2.03
SMT3YDR510W YAR023CD6VPM8 179 aa2.38□□□□□ -2.03
SMT3YDR510W CPA1P07258 411 aaKnown RBP2.38□□□□□ -2.03
SMT3YDR510W YPT53P36019 220 aa2.38□□□□□ -2.03
SMT3YDR510W VTC1P40046 129 aaRIP-Chip data2.38□□□□□ -2.03not detected
SMT3YDR510W SMD3P43321 101 aaKnown RBP2.38□□□□□ -2.03
SMT3YDR510W YFR054CP43622 192 aa2.38□□□□□ -2.03
SMT3YDR510W YGR026WP53217 278 aa2.38□□□□□ -2.03
SMT3YDR510W YDR274CP87283 123 aa2.38□□□□□ -2.03
SMT3YDR510W COF1Q03048 143 aaKnown RBP2.38□□□□□ -2.03
SMT3YDR510W WIP1Q2V2P8 89 aa2.38□□□□□ -2.03
SMT3YDR510W ODC2Q99297 307 aa2.38□□□□□ -2.03
SMT3YDR510W YIL177CP40434 1758 aa2.38□□□□□ -2.03
SMT3YDR510W YJL225CP40889 1758 aa2.38□□□□□ -2.03
SMT3YDR510W ATP5P09457 212 aa2.37□□□□□ -2.03
SMT3YDR510W CPR5P35176 225 aa2.37□□□□□ -2.03
SMT3YDR510W SHE2P36068 246 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
SMT3YDR510W UTH1P36135 365 aa2.37□□□□□ -2.03
SMT3YDR510W YNL200CP40165 246 aaKnown RBP2.37□□□□□ -2.03
SMT3YDR510W GVP36P40531 326 aaKnown RBP2.37□□□□□ -2.03
SMT3YDR510W FIP1P45976 327 aa2.37□□□□□ -2.03
SMT3YDR510W VPS71Q03433 280 aa2.37□□□□□ -2.03
SMT3YDR510W SPG3Q04398 127 aaPredicted RBP2.37□□□□□ -2.03
SMT3YDR510W YDR278CQ05612 105 aa2.37□□□□□ -2.03
SMT3YDR510W YPD1Q07688 167 aa2.37□□□□□ -2.03
SMT3YDR510W YPR063CQ12160 140 aa2.37□□□□□ -2.03
SMT3YDR510W Q0144Q9ZZW2 109 aa2.37□□□□□ -2.03
SMT3YDR510W MSW1P04803 379 aa2.36□□□□□ -2.03
SMT3YDR510W RPC19P28000 142 aaKnown RBP2.36□□□□□ -2.03
SMT3YDR510W YKR032WP36127 104 aa2.36□□□□□ -2.03
SMT3YDR510W MRPS9P38120 278 aa2.36□□□□□ -2.03
SMT3YDR510W FYV4P38783 130 aaPredicted RBP2.36□□□□□ -2.03
SMT3YDR510W GLC8P41818 229 aa2.36□□□□□ -2.03
SMT3YDR510W GLR1P41921 483 aaKnown RBP2.36□□□□□ -2.03
SMT3YDR510W ERJ5P43613 295 aaPredicted RBP2.36□□□□□ -2.03
SMT3YDR510W TIM13P53299 105 aa2.36□□□□□ -2.03
SMT3YDR510W YDR366CP87287 132 aa2.36□□□□□ -2.03
SMT3YDR510W YMR099CQ03161 297 aaKnown RBP2.36□□□□□ -2.03
SMT3YDR510W FRQ1Q06389 190 aa2.36□□□□□ -2.03
SMT3YDR510W ATP14Q12349 124 aa2.36□□□□□ -2.03
SMT3YDR510W SLO1Q3E784 85 aa2.36□□□□□ -2.03
SMT3YDR510W MID2P36027 376 aa2.35□□□□□ -2.03
SMT3YDR510W YER181CP40097 107 aa2.35□□□□□ -2.03
SMT3YDR510W HHO1P53551 258 aa2.35□□□□□ -2.03
SMT3YDR510W DIG2Q03373 323 aaKnown RBP2.35□□□□□ -2.03
SMT3YDR510W YOR214CQ12282 236 aa2.35□□□□□ -2.03
SMT3YDR510W POR1P04840 283 aaKnown RBP2.34□□□□□ -2.03
SMT3YDR510W TIR1P10863 254 aa2.34□□□□□ -2.03
SMT3YDR510W NSP1P14907 823 aaKnown RBP2.34□□□□□ -2.03
SMT3YDR510W SPT14P32363 452 aa2.34□□□□□ -2.03
SMT3YDR510W RPS1AP33442 255 aaKnown RBP2.34□□□□□ -2.03
SMT3YDR510W RPS20P38701 121 aaKnown RBP2.34□□□□□ -2.03
SMT3YDR510W YHL026CP38740 315 aa2.34□□□□□ -2.03
SMT3YDR510W APS3P47064 194 aa2.34□□□□□ -2.03
SMT3YDR510W YGR039WP53225 103 aa2.34□□□□□ -2.03
SMT3YDR510W YGR219WP53307 113 aa2.34□□□□□ -2.03
SMT3YDR510W SDH7Q04401 133 aa2.34□□□□□ -2.03
SMT3YDR510W GAL83Q04739 417 aa2.34□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 28.2 ms