RNA–Protein interactions for RNA: YDR328C

SKP1, Transcript of Evolutionarily conserved kinetochore protein, yeast

Gene SKP1, Length 585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP1	YDR328C	YGL258W-A	Q3E740	77 aa		5.94	□□□□□ -1.46
SKP1	YDR328C	ADE8	P04161	214 aa		5.93	□□□□□ -1.46
SKP1	YDR328C	RPP1A	P05318	106 aa	Predicted RBP	5.93	□□□□□ -1.46
SKP1	YDR328C	HEM13	P11353	328 aa	Known RBP	5.93	□□□□□ -1.46
SKP1	YDR328C	ATP3	P38077	311 aa	Known RBP	5.93	□□□□□ -1.46
SKP1	YDR328C	DFG10	P40526	253 aa		5.93	□□□□□ -1.46
SKP1	YDR328C	BNA1	P47096	177 aa		5.93	□□□□□ -1.46
SKP1	YDR328C	ERG25	P53045	309 aa		5.93	□□□□□ -1.46
SKP1	YDR328C	CRH1	P53301	507 aa		5.93	□□□□□ -1.46
SKP1	YDR328C	YNL234W	P53857	426 aa		5.93	□□□□□ -1.46
SKP1	YDR328C	TMA10	Q06177	86 aa		5.93	□□□□□ -1.46
SKP1	YDR328C	YPS3	Q12303	508 aa		5.93	□□□□□ -1.46
SKP1	YDR328C	RAX2	Q12465	1220 aa		5.93	□□□□□ -1.46
SKP1	YDR328C	AGC1	Q12482	902 aa		5.93	□□□□□ -1.46
SKP1	YDR328C	URA5	P13298	226 aa	Known RBP	5.92	□□□□□ -1.46
SKP1	YDR328C	NOP1	P15646	327 aa	Known RBP	5.92	□□□□□ -1.46
SKP1	YDR328C	YCL042W	P25572	119 aa		5.92	□□□□□ -1.46
SKP1	YDR328C	YJR056C	P47115	236 aa		5.92	□□□□□ -1.46
SKP1	YDR328C	DCS1	Q06151	350 aa		5.92	□□□□□ -1.46
SKP1	YDR328C	UPS2	P35200	230 aa		5.91	□□□□□ -1.46
SKP1	YDR328C	YKR045C	P36138	183 aa		5.91	□□□□□ -1.46
SKP1	YDR328C	NOP16	P40007	231 aa	Known RBP	5.91	□□□□□ -1.46
SKP1	YDR328C	COX15	P40086	486 aa		5.91	□□□□□ -1.46
SKP1	YDR328C	EMC5	P40540	141 aa		5.91	□□□□□ -1.46
SKP1	YDR328C	YCL001W-A	P87012	153 aa		5.91	□□□□□ -1.46
SKP1	YDR328C	ODC1	Q03028	310 aa		5.91	□□□□□ -1.46
SKP1	YDR328C	MRPS17	Q03246	237 aa	Predicted RBP	5.91	□□□□□ -1.46
SKP1	YDR328C	DAL4	Q04895	635 aa		5.91	□□□□□ -1.46
SKP1	YDR328C	TDA6	Q06466	467 aa		5.91	□□□□□ -1.46
SKP1	YDR328C	YER145C-A	A0A023PYF4	145 aa		5.9	□□□□□ -1.46
SKP1	YDR328C	HTB1	P02293	131 aa	Known RBP	5.9	□□□□□ -1.46
SKP1	YDR328C	FCY2	P17064	533 aa		5.9	□□□□□ -1.46
SKP1	YDR328C	RTC3	P38804	111 aa	Predicted RBP	5.9	□□□□□ -1.46
SKP1	YDR328C	YGR269W	P40326	108 aa		5.9	□□□□□ -1.46
SKP1	YDR328C	YIP1	P53039	248 aa		5.9	□□□□□ -1.46
SKP1	YDR328C	YGR151C	P53287	111 aa		5.9	□□□□□ -1.46
SKP1	YDR328C	SSU72	P53538	206 aa	Predicted RBP	5.9	□□□□□ -1.46
SKP1	YDR328C	YNR066C	P53752	436 aa		5.9	□□□□□ -1.46
SKP1	YDR328C	DYN2	Q02647	92 aa		5.9	□□□□□ -1.46
SKP1	YDR328C	YLR179C	Q06252	201 aa	Known RBP	5.9	□□□□□ -1.46
SKP1	YDR328C	FRQ1	Q06389	190 aa		5.9	□□□□□ -1.46
SKP1	YDR328C	USV1	Q12132	391 aa		5.9	□□□□□ -1.46
SKP1	YDR328C	FCY1	Q12178	158 aa		5.9	□□□□□ -1.46
SKP1	YDR328C	POC4	Q12245	148 aa	Predicted RBP	5.9	□□□□□ -1.46
SKP1	YDR328C	TRP4	P07285	380 aa	Predicted RBP	5.89	□□□□□ -1.47
SKP1	YDR328C	ZRC1	P20107	442 aa		5.89	□□□□□ -1.47
SKP1	YDR328C	YBR184W	P38299	523 aa		5.89	□□□□□ -1.47
SKP1	YDR328C	PEX7	P39108	375 aa		5.89	□□□□□ -1.47
SKP1	YDR328C	SPC25	P40014	221 aa		5.89	□□□□□ -1.47
SKP1	YDR328C	PIC2	P40035	300 aa		5.89	□□□□□ -1.47
SKP1	YDR328C	LSM4	P40070	187 aa	Known RBP	5.89	□□□□□ -1.47
SKP1	YDR328C	NSA2	P40078	261 aa	Known RBP	5.89	□□□□□ -1.47
SKP1	YDR328C	YJL213W	P40896	331 aa		5.89	□□□□□ -1.47
SKP1	YDR328C	PUS4	P48567	403 aa	Known RBP	5.89	□□□□□ -1.47
SKP1	YDR328C	FMP41	P53889	259 aa	Known RBP	5.89	□□□□□ -1.47
SKP1	YDR328C	YMR166C	Q03829	368 aa		5.89	□□□□□ -1.47
SKP1	YDR328C	YDL242W	Q07746	117 aa		5.89	□□□□□ -1.47
SKP1	YDR328C	SOD1	P00445	154 aa	Known RBP	5.88	□□□□□ -1.47
SKP1	YDR328C	RPL15A	P05748	204 aa	Known RBP	5.88	□□□□□ -1.47
SKP1	YDR328C	RPS25B	P0C0T4	108 aa	Known RBP	5.88	□□□□□ -1.47
SKP1	YDR328C	PHO85	P17157	305 aa		5.88	□□□□□ -1.47
SKP1	YDR328C	RPB9	P27999	122 aa		5.88	□□□□□ -1.47
SKP1	YDR328C	AHT1	P29589	182 aa		5.88	□□□□□ -1.47
SKP1	YDR328C	YBR292C	P38357	123 aa		5.88	□□□□□ -1.47
SKP1	YDR328C	WSS1	P38838	269 aa		5.88	□□□□□ -1.47
SKP1	YDR328C	HXT14	P42833	540 aa		5.88	□□□□□ -1.47
SKP1	YDR328C	CAF16	P43569	289 aa		5.88	□□□□□ -1.47
SKP1	YDR328C	YJL163C	P46996	555 aa		5.88	□□□□□ -1.47
SKP1	YDR328C	SNN1	P48232	102 aa		5.88	□□□□□ -1.47
SKP1	YDR328C	RPL15B	P54780	204 aa	Predicted RBP	5.88	□□□□□ -1.47
SKP1	YDR328C	ADD37	Q03233	198 aa		5.88	□□□□□ -1.47
SKP1	YDR328C	MCH1	Q07376	486 aa		5.88	□□□□□ -1.47
SKP1	YDR328C	JID1	Q12350	301 aa		5.88	□□□□□ -1.47
SKP1	YDR328C	COX19	Q3E731	98 aa		5.88	□□□□□ -1.47
SKP1	YDR328C	RPS25A	Q3E792	108 aa	Predicted RBP	5.88	□□□□□ -1.47
SKP1	YDR328C	MRS3	P10566	314 aa		5.87	□□□□□ -1.47
SKP1	YDR328C	SUA7	P29055	345 aa	Predicted RBP	5.87	□□□□□ -1.47
SKP1	YDR328C	RAD23	P32628	398 aa	Known RBP	5.87	□□□□□ -1.47
SKP1	YDR328C	MIA40	P36046	403 aa		5.87	□□□□□ -1.47
SKP1	YDR328C	SHG1	P38337	142 aa		5.87	□□□□□ -1.47
SKP1	YDR328C	LST8	P41318	303 aa		5.87	□□□□□ -1.47
SKP1	YDR328C	YFL054C	P43549	646 aa		5.87	□□□□□ -1.47
SKP1	YDR328C	SDO1	Q07953	250 aa	Known RBP	5.87	□□□□□ -1.47
SKP1	YDR328C	RAD28	Q12021	506 aa		5.87	□□□□□ -1.47
SKP1	YDR328C	LSO2	Q3E772	92 aa	Known RBP	5.87	□□□□□ -1.47
SKP1	YDR328C	TOM40	P23644	387 aa	Known RBP	5.86	□□□□□ -1.47
SKP1	YDR328C	CDC50	P25656	391 aa		5.86	□□□□□ -1.47
SKP1	YDR328C	MSK1	P32048	576 aa		5.86	□□□□□ -1.47
SKP1	YDR328C	FPR2	P32472	135 aa		5.86	□□□□□ -1.47
SKP1	YDR328C	YGL015C	P33199	130 aa		5.86	□□□□□ -1.47
SKP1	YDR328C	PRE3	P38624	215 aa		5.86	□□□□□ -1.47
SKP1	YDR328C	FLO5	P38894	1075 aa		5.86	□□□□□ -1.47
SKP1	YDR328C	ISU1	Q03020	165 aa		5.86	□□□□□ -1.47
SKP1	YDR328C	TMA23	Q03525	211 aa		5.86	□□□□□ -1.47
SKP1	YDR328C	YOR015W	Q12169	119 aa		5.86	□□□□□ -1.47
SKP1	YDR328C	RKI1	Q12189	258 aa		5.86	□□□□□ -1.47
SKP1	YDR328C	QCR9	P22289	66 aa		5.85	□□□□□ -1.47
SKP1	YDR328C	ELO2	P25358	347 aa		5.85	□□□□□ -1.47
SKP1	YDR328C	LDS1	P31379	325 aa		5.85	□□□□□ -1.47
SKP1	YDR328C	DAL3	P32459	195 aa		5.85	□□□□□ -1.47

Retrieved 100 of 5,963 RNA–protein pairs in 88.1 ms