RNA–Protein interactions for RNA: YDR261W-A

YDR261W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YDR261W-A, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR261W-AYDR261W-A YEA4P40004 342 aa0.95□□□□□ -2.26
YDR261W-AYDR261W-A ERG10P41338 398 aaKnown RBP0.95□□□□□ -2.26
YDR261W-AYDR261W-A YMR295CQ03559 197 aa0.95□□□□□ -2.26
YDR261W-AYDR261W-A PRP11Q07350 266 aaPredicted RBP0.95□□□□□ -2.26
YDR261W-AYDR261W-A IRC23Q08416 157 aa0.95□□□□□ -2.26
YDR261W-AYDR261W-A RPB4P20433 221 aaPredicted RBP0.94□□□□□ -2.26
YDR261W-AYDR261W-A NTG1P31378 399 aa0.94□□□□□ -2.26
YDR261W-AYDR261W-A YKT6P36015 200 aaKnown RBP0.94□□□□□ -2.26
YDR261W-AYDR261W-A YHL018WP38744 120 aaPredicted RBP0.94□□□□□ -2.26
YDR261W-AYDR261W-A HPA3P39979 161 aa0.94□□□□□ -2.26
YDR261W-AYDR261W-A PGA2P53903 129 aa0.94□□□□□ -2.26
YDR261W-AYDR261W-A YMR099CQ03161 297 aaKnown RBP0.94□□□□□ -2.26
YDR261W-AYDR261W-A MRPS17Q03246 237 aaPredicted RBP0.94□□□□□ -2.26
YDR261W-AYDR261W-A YPK2P18961 677 aa0.93□□□□□ -2.26
YDR261W-AYDR261W-A DAD4P69851 72 aa0.93□□□□□ -2.26
YDR261W-AYDR261W-A DYN3Q04949 312 aa0.93□□□□□ -2.26
YDR261W-AYDR261W-A ATG38Q05789 226 aaKnown RBP0.93□□□□□ -2.26
YDR261W-AYDR261W-A GGA1Q06336 557 aa0.93□□□□□ -2.26
YDR261W-AYDR261W-A COX8P04039 78 aa0.92□□□□□ -2.26
YDR261W-AYDR261W-A RFA3P26755 122 aaKnown RBP0.92□□□□□ -2.26
YDR261W-AYDR261W-A ASF2P32448 525 aaPredicted RBP0.92□□□□□ -2.26
YDR261W-AYDR261W-A YEL008WP40001 126 aa0.92□□□□□ -2.26
YDR261W-AYDR261W-A BNA7Q04066 261 aa0.92□□□□□ -2.26
YDR261W-AYDR261W-A FIT2Q08906 153 aa0.92□□□□□ -2.26
YDR261W-AYDR261W-A YPR013CQ12145 317 aa0.92□□□□□ -2.26
YDR261W-AYDR261W-A CHD1P32657 1468 aa0.91□□□□□ -2.26
YDR261W-AYDR261W-A CNB1P25296 175 aa0.91□□□□□ -2.26
YDR261W-AYDR261W-A RPB7P34087 171 aa0.91□□□□□ -2.26
YDR261W-AYDR261W-A YER134CP40081 178 aa0.91□□□□□ -2.26
YDR261W-AYDR261W-A SER2P42941 309 aa0.91□□□□□ -2.26
YDR261W-AYDR261W-A UBC12P52491 188 aa0.91□□□□□ -2.26
YDR261W-AYDR261W-A CGR1P53188 120 aa0.91□□□□□ -2.26
YDR261W-AYDR261W-A UPS3Q04006 179 aa0.91□□□□□ -2.26
YDR261W-AYDR261W-A YCL012CQ8J0M4 134 aa0.91□□□□□ -2.26
YDR261W-AYDR261W-A SAC3P46674 1301 aa0.91□□□□□ -2.26
YDR261W-AYDR261W-A YAR023CD6VPM8 179 aa0.9□□□□□ -2.26
YDR261W-AYDR261W-A MBF1O14467 151 aaKnown RBP0.9□□□□□ -2.26
YDR261W-AYDR261W-A GIM3P53900 129 aa0.9□□□□□ -2.26
YDR261W-AYDR261W-A YLR460CP54007 376 aa0.9□□□□□ -2.26
YDR261W-AYDR261W-A SHH3Q04487 196 aa0.9□□□□□ -2.26
YDR261W-AYDR261W-A SMD2Q06217 110 aaKnown RBP0.9□□□□□ -2.26
YDR261W-AYDR261W-A ABP140Q08641 628 aaKnown RBP0.9□□□□□ -2.26
YDR261W-AYDR261W-A HTB1P02293 131 aaKnown RBP0.89□□□□□ -2.27
YDR261W-AYDR261W-A HTB2P02294 131 aa0.89□□□□□ -2.27
YDR261W-AYDR261W-A RAD51P25454 400 aa0.89□□□□□ -2.27
YDR261W-AYDR261W-A ADE1P27616 306 aa0.89□□□□□ -2.27
YDR261W-AYDR261W-A ARC19P33204 171 aaKnown RBP0.89□□□□□ -2.27
YDR261W-AYDR261W-A YMR226CQ05016 267 aaKnown RBP0.89□□□□□ -2.27
YDR261W-AYDR261W-A RNH202Q05635 350 aa0.89□□□□□ -2.27
YDR261W-AYDR261W-A YOL014WQ08110 124 aa0.89□□□□□ -2.27
YDR261W-AYDR261W-A GET4Q12125 312 aa0.89□□□□□ -2.27
YDR261W-AYDR261W-A COA3Q3E7B2 85 aa0.89□□□□□ -2.27
YDR261W-AYDR261W-A CBF1P17106 351 aa0.89□□□□□ -2.27
YDR261W-AYDR261W-A ARO7P32178 256 aa0.89□□□□□ -2.27
YDR261W-AYDR261W-A SFK1P35735 353 aa0.89□□□□□ -2.27
YDR261W-AYDR261W-A EGD2P38879 174 aaKnown RBP0.89□□□□□ -2.27
YDR261W-AYDR261W-A RFC4P40339 323 aaKnown RBP0.89□□□□□ -2.27
YDR261W-AYDR261W-A SKI6P46948 246 aaPredicted RBP0.89□□□□□ -2.27
YDR261W-AYDR261W-A HOP2P53187 214 aa0.89□□□□□ -2.27
YDR261W-AYDR261W-A QCR7P00128 127 aa0.88□□□□□ -2.27
YDR261W-AYDR261W-A ATP7P30902 174 aa0.88□□□□□ -2.27
YDR261W-AYDR261W-A MTW1P39731 289 aa0.88□□□□□ -2.27
YDR261W-AYDR261W-A ARP3P47117 449 aaKnown RBP0.88□□□□□ -2.27
YDR261W-AYDR261W-A NOP19P53317 196 aaPredicted RBP0.88□□□□□ -2.27
YDR261W-AYDR261W-A GIM5Q04493 163 aa0.88□□□□□ -2.27
YDR261W-AYDR261W-A YLR036CQ07986 203 aa0.88□□□□□ -2.27
YDR261W-AYDR261W-A RPL35AP0CX84 120 aaKnown RBP0.87□□□□□ -2.27
YDR261W-AYDR261W-A RPL35BP0CX85 120 aaKnown RBP0.87□□□□□ -2.27
YDR261W-AYDR261W-A APA2P22108 325 aa0.87□□□□□ -2.27
YDR261W-AYDR261W-A GSP2P32836 220 aaKnown RBP0.87□□□□□ -2.27
YDR261W-AYDR261W-A VPS51P36116 164 aa0.87□□□□□ -2.27
YDR261W-AYDR261W-A PAM17P36147 197 aa0.87□□□□□ -2.27
YDR261W-AYDR261W-A FMP23P38231 175 aa0.87□□□□□ -2.27
YDR261W-AYDR261W-A CUP9P41817 306 aa0.87□□□□□ -2.27
YDR261W-AYDR261W-A ALB1P47019 175 aaPredicted RBP0.87□□□□□ -2.27
YDR261W-AYDR261W-A JAC1P53193 184 aa0.87□□□□□ -2.27
YDR261W-AYDR261W-A THG1P53215 237 aaKnown RBP0.87□□□□□ -2.27
YDR261W-AYDR261W-A LCL2Q08045 131 aa0.87□□□□□ -2.27
YDR261W-AYDR261W-A CMC2Q3E7A4 109 aa0.87□□□□□ -2.27
YDR261W-AYDR261W-A YML100W-AQ8TGT0 57 aa0.87□□□□□ -2.27
YDR261W-AYDR261W-A MATALPHA2P0CY08 210 aa0.86□□□□□ -2.27
YDR261W-AYDR261W-A HMLALPHA2P0CY09 210 aa0.86□□□□□ -2.27
YDR261W-AYDR261W-A PHO85P17157 305 aa0.86□□□□□ -2.27
YDR261W-AYDR261W-A FES1P38260 290 aa0.86□□□□□ -2.27
YDR261W-AYDR261W-A EFM5P53200 248 aaKnown RBP0.86□□□□□ -2.27
YDR261W-AYDR261W-A YNL140CP53910 189 aa0.86□□□□□ -2.27
YDR261W-AYDR261W-A YNL033WP53964 284 aa0.86□□□□□ -2.27
YDR261W-AYDR261W-A MET31Q03081 177 aa0.86□□□□□ -2.27
YDR261W-AYDR261W-A YLR031WQ07978 186 aa0.86□□□□□ -2.27
YDR261W-AYDR261W-A MRS1P07266 363 aa0.85□□□□□ -2.27
YDR261W-AYDR261W-A MGT1P26188 188 aa0.85□□□□□ -2.27
YDR261W-AYDR261W-A UBC6P33296 250 aaPredicted RBP0.85□□□□□ -2.27
YDR261W-AYDR261W-A MRPL15P36523 253 aa0.85□□□□□ -2.27
YDR261W-AYDR261W-A MAK5P38112 773 aaPredicted RBP0.85□□□□□ -2.27
YDR261W-AYDR261W-A SHG1P38337 142 aa0.85□□□□□ -2.27
YDR261W-AYDR261W-A POG1P40473 351 aa0.85□□□□□ -2.27
YDR261W-AYDR261W-A YJR111CP47148 283 aaKnown RBP0.85□□□□□ -2.27
YDR261W-AYDR261W-A DIG2Q03373 323 aaKnown RBP0.85□□□□□ -2.27
YDR261W-AYDR261W-A ARO80Q04052 950 aa0.85□□□□□ -2.27
YDR261W-AYDR261W-A YET3Q07451 203 aa0.85□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms