RNA–Protein interactions for RNA: YDR243C

PRP28, Transcript of RNA helicase in the DEAD-box family, yeastyeast

Gene PRP28, Length 1,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP28YDR243C ARR3Q06598 404 aa3.91□□□□□ -1.78
PRP28YDR243C YOR385WQ08909 290 aa3.91□□□□□ -1.78
PRP28YDR243C YPL162CQ12042 273 aa3.91□□□□□ -1.78
PRP28YDR243C YOR029WQ12243 111 aa3.91□□□□□ -1.78
PRP28YDR243C IZH2Q12442 317 aa3.91□□□□□ -1.78
PRP28YDR243C UBR2Q07963 1872 aa3.91□□□□□ -1.78
PRP28YDR243C POR1P04840 283 aaKnown RBP3.91□□□□□ -1.78
PRP28YDR243C RPL7AP05737 244 aaKnown RBP3.91□□□□□ -1.78
PRP28YDR243C YSR3P23501 404 aa3.91□□□□□ -1.78
PRP28YDR243C CNE1P27825 502 aa3.91□□□□□ -1.78
PRP28YDR243C PMI40P29952 429 aaKnown RBP3.91□□□□□ -1.78
PRP28YDR243C TKL2P33315 681 aa3.91□□□□□ -1.78
PRP28YDR243C HSP10P38910 106 aa3.91□□□□□ -1.78
PRP28YDR243C DLS1P40366 167 aa3.91□□□□□ -1.78
PRP28YDR243C SAS2P40963 338 aa3.91□□□□□ -1.78
PRP28YDR243C YFR057WP43625 151 aa3.91□□□□□ -1.78
PRP28YDR243C YDL186WP48568 277 aa3.91□□□□□ -1.78
PRP28YDR243C TEX1P53851 422 aaKnown RBP3.91□□□□□ -1.78
PRP28YDR243C MRPL51Q06090 140 aaPredicted RBP3.91□□□□□ -1.78
PRP28YDR243C TAZ1Q06510 381 aa3.91□□□□□ -1.78
PRP28YDR243C YLR363W-AQ3E747 85 aa3.91□□□□□ -1.78
PRP28YDR243C TFB5Q3E7C1 72 aaPredicted RBP3.91□□□□□ -1.78
PRP28YDR243C HMRA1P0CY11 126 aa3.9□□□□□ -1.79
PRP28YDR243C YNL194CP40169 301 aa3.9□□□□□ -1.79
PRP28YDR243C MEP2P41948 499 aa3.9□□□□□ -1.79
PRP28YDR243C YJL118WP47022 219 aa3.9□□□□□ -1.79
PRP28YDR243C HNT1Q04344 158 aaKnown RBP3.9□□□□□ -1.79
PRP28YDR243C SNO4Q04902 237 aa3.9□□□□□ -1.79
PRP28YDR243C BLS1Q06071 122 aa3.9□□□□□ -1.79
PRP28YDR243C RRG8Q06109 277 aa3.9□□□□□ -1.79
PRP28YDR243C HSP32Q08992 237 aa3.9□□□□□ -1.79
PRP28YDR243C ICT1Q12385 394 aa3.9□□□□□ -1.79
PRP28YDR243C MRPL20P22354 195 aaPredicted RBP3.89□□□□□ -1.79
PRP28YDR243C RFA3P26755 122 aaKnown RBP3.89□□□□□ -1.79
PRP28YDR243C SKN1P33336 771 aa3.89□□□□□ -1.79
PRP28YDR243C CMC1P36064 111 aa3.89□□□□□ -1.79
PRP28YDR243C PAU24P38155 120 aa3.89□□□□□ -1.79
PRP28YDR243C SDS24P38314 527 aa3.89□□□□□ -1.79
PRP28YDR243C ATX1P38636 73 aa3.89□□□□□ -1.79
PRP28YDR243C RPS20P38701 121 aaKnown RBP3.89□□□□□ -1.79
PRP28YDR243C YND1P40009 630 aa3.89□□□□□ -1.79
PRP28YDR243C HMF1P40037 129 aaKnown RBP3.89□□□□□ -1.79
PRP28YDR243C YIL059CP40520 121 aa3.89□□□□□ -1.79
PRP28YDR243C YJL028WP47062 111 aa3.89□□□□□ -1.79
PRP28YDR243C YGL230CP53074 147 aa3.89□□□□□ -1.79
PRP28YDR243C RRT7Q07829 113 aa3.89□□□□□ -1.79
PRP28YDR243C XYL2Q07993 356 aa3.89□□□□□ -1.79
PRP28YDR243C YOR376WQ08900 122 aa3.89□□□□□ -1.79
PRP28YDR243C YPQ1Q12010 308 aa3.89□□□□□ -1.79
PRP28YDR243C YIL102C-AQ2V2P5 75 aa3.89□□□□□ -1.79
PRP28YDR243C YBL112CQ3E7Y4 105 aa3.89□□□□□ -1.79
PRP28YDR243C HKR1P41809 1802 aa3.89□□□□□ -1.79
PRP28YDR243C HEM2P05373 342 aa3.89□□□□□ -1.79
PRP28YDR243C MSI1P13712 422 aa3.89□□□□□ -1.79
PRP28YDR243C KTI12P34253 313 aaKnown RBP3.89□□□□□ -1.79
PRP28YDR243C CTF8P38877 133 aa3.89□□□□□ -1.79
PRP28YDR243C SDP1P40479 209 aa3.89□□□□□ -1.79
PRP28YDR243C XPT1P47165 209 aa3.89□□□□□ -1.79
PRP28YDR243C WSC2P53832 503 aa3.89□□□□□ -1.79
PRP28YDR243C YNL143CP53908 130 aa3.89□□□□□ -1.79
PRP28YDR243C IRC15Q02733 499 aa3.89□□□□□ -1.79
PRP28YDR243C YMR178WQ03219 274 aaKnown RBP3.89□□□□□ -1.79
PRP28YDR243C BET5Q03630 159 aa3.89□□□□□ -1.79
PRP28YDR243C INP1Q03694 420 aa3.89□□□□□ -1.79
PRP28YDR243C BSC1Q12140 328 aa3.89□□□□□ -1.79
PRP28YDR243C YLR146W-AQ2V2P1 62 aa3.89□□□□□ -1.79
PRP28YDR243C RAD6P06104 172 aa3.88□□□□□ -1.79
PRP28YDR243C RPL12AP0CX53 165 aaKnown RBP3.88□□□□□ -1.79
PRP28YDR243C RPL12BP0CX54 165 aa3.88□□□□□ -1.79
PRP28YDR243C CDC26P14724 124 aa3.88□□□□□ -1.79
PRP28YDR243C SEC11P15367 167 aa3.88□□□□□ -1.79
PRP28YDR243C ERG8P24521 451 aa3.88□□□□□ -1.79
PRP28YDR243C YSC83P32792 385 aa3.88□□□□□ -1.79
PRP28YDR243C SGE1P33335 543 aa3.88□□□□□ -1.79
PRP28YDR243C SLM6P38343 150 aa3.88□□□□□ -1.79
PRP28YDR243C APQ12P40532 138 aa3.88□□□□□ -1.79
PRP28YDR243C YJL213WP40896 331 aa3.88□□□□□ -1.79
PRP28YDR243C TES1P41903 349 aaKnown RBP3.88□□□□□ -1.79
PRP28YDR243C RPN11P43588 306 aaKnown RBP3.88□□□□□ -1.79
PRP28YDR243C CIN2P46670 268 aa3.88□□□□□ -1.79
PRP28YDR243C UBX6P47049 396 aa3.88□□□□□ -1.79
PRP28YDR243C SBH1P52870 82 aa3.88□□□□□ -1.79
PRP28YDR243C IBD2P53892 351 aa3.88□□□□□ -1.79
PRP28YDR243C HLR1Q04429 423 aa3.88□□□□□ -1.79
PRP28YDR243C TRI1Q05024 226 aa3.88□□□□□ -1.79
PRP28YDR243C DGA1Q08650 418 aa3.88□□□□□ -1.79
PRP28YDR243C YPL264CQ08980 353 aa3.88□□□□□ -1.79
PRP28YDR243C JID1Q12350 301 aa3.88□□□□□ -1.79
PRP28YDR243C YKL183C-AQ3E765 70 aa3.88□□□□□ -1.79
PRP28YDR243C YDR157WA0A023PZE8 133 aa3.87□□□□□ -1.79
PRP28YDR243C ILV1P00927 576 aaKnown RBP3.87□□□□□ -1.79
PRP28YDR243C MRS1P07266 363 aa3.87□□□□□ -1.79
PRP28YDR243C YAR066WP0CX18 203 aa3.87□□□□□ -1.79
PRP28YDR243C YHR214WP0CX19 203 aa3.87□□□□□ -1.79
PRP28YDR243C CPR2P23285 205 aa3.87□□□□□ -1.79
PRP28YDR243C VMA11P32842 164 aa3.87□□□□□ -1.79
PRP28YDR243C SHB17P36136 271 aaKnown RBP3.87□□□□□ -1.79
PRP28YDR243C YKR070WP36151 352 aaKnown RBP3.87□□□□□ -1.79
PRP28YDR243C VBA2P38358 474 aaKnown RBP3.87□□□□□ -1.79
PRP28YDR243C FYV4P38783 130 aaPredicted RBP3.87□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms