RNA–Protein interactions for RNA: YDR171W

HSP42, Transcript of Small heat shock protein (sHSP) with chaperone activity, yeast

Gene HSP42, Length 1,128 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HSP42	YDR171W	OGG1	P53397	376 aa	Predicted RBP	3.57	□□□□□ -1.84
HSP42	YDR171W	YLR152C	P54072	576 aa		3.57	□□□□□ -1.84
HSP42	YDR171W	YDR366C	P87287	132 aa		3.57	□□□□□ -1.84
HSP42	YDR171W	YOR015W	Q12169	119 aa		3.57	□□□□□ -1.84
HSP42	YDR171W	MCT1	Q12283	360 aa		3.57	□□□□□ -1.84
HSP42	YDR171W	YDR262W	Q12331	272 aa		3.57	□□□□□ -1.84
HSP42	YDR171W	RPS25A	Q3E792	108 aa	Predicted RBP	3.57	□□□□□ -1.84
HSP42	YDR171W	PAU1	P0CE88	120 aa		3.56	□□□□□ -1.84
HSP42	YDR171W	PAU14	P0CE89	120 aa		3.56	□□□□□ -1.84
HSP42	YDR171W	PAU6	P0CE90	120 aa		3.56	□□□□□ -1.84
HSP42	YDR171W	PAU18	P0CE91	120 aa		3.56	□□□□□ -1.84
HSP42	YDR171W	PAU8	P0CE92	120 aa		3.56	□□□□□ -1.84
HSP42	YDR171W	PAU11	P0CE93	120 aa		3.56	□□□□□ -1.84
HSP42	YDR171W	RFA3	P26755	122 aa	Known RBP	3.56	□□□□□ -1.84
HSP42	YDR171W	YKL102C	P34249	101 aa		3.56	□□□□□ -1.84
HSP42	YDR171W	PAU13	P38725	120 aa		3.56	□□□□□ -1.84
HSP42	YDR171W	ECM34	P38728	170 aa		3.56	□□□□□ -1.84
HSP42	YDR171W	ERG25	P53045	309 aa		3.56	□□□□□ -1.84
HSP42	YDR171W	PAU4	P53427	120 aa		3.56	□□□□□ -1.84
HSP42	YDR171W	APS2	Q00381	147 aa		3.56	□□□□□ -1.84
HSP42	YDR171W	YPL067C	Q02754	198 aa		3.56	□□□□□ -1.84
HSP42	YDR171W	VPS28	Q02767	242 aa		3.56	□□□□□ -1.84
HSP42	YDR171W	PAU10	Q03050	120 aa		3.56	□□□□□ -1.84
HSP42	YDR171W	YMR082C	Q04276	118 aa		3.56	□□□□□ -1.84
HSP42	YDR171W	SHH3	Q04487	196 aa		3.56	□□□□□ -1.84
HSP42	YDR171W	ROY1	Q04847	553 aa		3.56	□□□□□ -1.84
HSP42	YDR171W	FSH2	Q05015	223 aa		3.56	□□□□□ -1.84
HSP42	YDR171W	MRX8	Q05473	314 aa		3.56	□□□□□ -1.84
HSP42	YDR171W	PAU23	Q07987	124 aa		3.56	□□□□□ -1.84
HSP42	YDR171W	PAU20	Q08322	120 aa		3.56	□□□□□ -1.84
HSP42	YDR171W	FCY22	Q12119	530 aa		3.56	□□□□□ -1.84
HSP42	YDR171W	PAU17	Q12370	124 aa		3.56	□□□□□ -1.84
HSP42	YDR171W	PAU9	Q3E770	120 aa		3.56	□□□□□ -1.84
HSP42	YDR171W	YDR157W	A0A023PZE8	133 aa		3.55	□□□□□ -1.84
HSP42	YDR171W	STF1	P01098	86 aa		3.55	□□□□□ -1.84
HSP42	YDR171W	SPO7	P18410	259 aa		3.55	□□□□□ -1.84
HSP42	YDR171W	MDL1	P33310	695 aa		3.55	□□□□□ -1.84
HSP42	YDR171W	UPS2	P35200	230 aa		3.55	□□□□□ -1.84
HSP42	YDR171W	GPX1	P36014	167 aa		3.55	□□□□□ -1.84
HSP42	YDR171W	YBR096W	P38256	230 aa		3.55	□□□□□ -1.84
HSP42	YDR171W	YIL067C	P40514	678 aa		3.55	□□□□□ -1.84
HSP42	YDR171W	RIB4	P50861	169 aa	Predicted RBP	3.55	□□□□□ -1.84
HSP42	YDR171W	EMC4	P53073	190 aa		3.55	□□□□□ -1.84
HSP42	YDR171W	YGR250C	P53316	781 aa	Known RBP	3.55	□□□□□ -1.84
HSP42	YDR171W	PDR16	P53860	351 aa	Known RBP	3.55	□□□□□ -1.84
HSP42	YDR171W	ALG9	P53868	555 aa	Known RBP	3.55	□□□□□ -1.84
HSP42	YDR171W	HHT1	P61830	136 aa		3.55	□□□□□ -1.84
HSP42	YDR171W	DIG2	Q03373	323 aa	Known RBP	3.55	□□□□□ -1.84
HSP42	YDR171W	MCH1	Q07376	486 aa		3.55	□□□□□ -1.84
HSP42	YDR171W	COQ10	Q08058	207 aa		3.55	□□□□□ -1.84
HSP42	YDR171W	YPQ1	Q12010	308 aa		3.55	□□□□□ -1.84
HSP42	YDR171W	UBA3	Q99344	299 aa		3.55	□□□□□ -1.84
HSP42	YDR171W	MDM35	O60200	86 aa		3.54	□□□□□ -1.84
HSP42	YDR171W	ADH2	P00331	348 aa	Known RBP	3.54	□□□□□ -1.84
HSP42	YDR171W	SUA7	P29055	345 aa	Predicted RBP	3.54	□□□□□ -1.84
HSP42	YDR171W	GSP1	P32835	219 aa	Known RBP	3.54	□□□□□ -1.84
HSP42	YDR171W	GSP2	P32836	220 aa	Known RBP	3.54	□□□□□ -1.84
HSP42	YDR171W	YKL187C	P34231	750 aa		3.54	□□□□□ -1.84
HSP42	YDR171W	RPL14A	P36105	138 aa	Known RBP	3.54	□□□□□ -1.84
HSP42	YDR171W	MIX23	P38162	196 aa		3.54	□□□□□ -1.84
HSP42	YDR171W	UMP1	P38293	148 aa		3.54	□□□□□ -1.84
HSP42	YDR171W	SSH1	P38353	490 aa	Known RBP	3.54	□□□□□ -1.84
HSP42	YDR171W	RPL14B	P38754	138 aa	Known RBP	3.54	□□□□□ -1.84
HSP42	YDR171W	RPB11	P38902	120 aa		3.54	□□□□□ -1.84
HSP42	YDR171W	YJR011C	P47086	261 aa	Predicted RBP	3.54	□□□□□ -1.84
HSP42	YDR171W	PCP1	P53259	346 aa		3.54	□□□□□ -1.84
HSP42	YDR171W	SKO1	Q02100	647 aa		3.54	□□□□□ -1.84
HSP42	YDR171W	YLR179C	Q06252	201 aa	Known RBP	3.54	□□□□□ -1.84
HSP42	YDR171W	YLR030W	Q07967	263 aa		3.54	□□□□□ -1.84
HSP42	YDR171W	NAT5	Q08689	176 aa		3.54	□□□□□ -1.84
HSP42	YDR171W	SME1	Q12330	94 aa	Predicted RBP	3.54	□□□□□ -1.84
HSP42	YDR171W	PAR32	Q12515	295 aa	Known RBP	3.54	□□□□□ -1.84
HSP42	YDR171W	CYR1	P08678	2026 aa	Known RBP	3.54	□□□□□ -1.84
HSP42	YDR171W	BLM10	P43583	2143 aa		3.53	□□□□□ -1.84
HSP42	YDR171W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	3.53	□□□□□ -1.84	not detected
HSP42	YDR171W	MSW1	P04803	379 aa		3.53	□□□□□ -1.84
HSP42	YDR171W	CPR1	P14832	162 aa	Known RBP	3.53	□□□□□ -1.84
HSP42	YDR171W	CTA1	P15202	515 aa		3.53	□□□□□ -1.84
HSP42	YDR171W	MDH2	P22133	377 aa		3.53	□□□□□ -1.84
HSP42	YDR171W	ADK2	P26364	225 aa		3.53	□□□□□ -1.84
HSP42	YDR171W	PEX4	P29340	183 aa		3.53	□□□□□ -1.84
HSP42	YDR171W	ARO4	P32449	370 aa	Known RBP	3.53	□□□□□ -1.84
HSP42	YDR171W	UTR5	P32630	166 aa		3.53	□□□□□ -1.84
HSP42	YDR171W	PAU16	P35994	123 aa		3.53	□□□□□ -1.84
HSP42	YDR171W	YCR041W	P37265	110 aa		3.53	□□□□□ -1.84
HSP42	YDR171W	AME1	P38313	324 aa		3.53	□□□□□ -1.84
HSP42	YDR171W	DOG1	P38774	246 aa		3.53	□□□□□ -1.84
HSP42	YDR171W	PCL7	P40186	285 aa		3.53	□□□□□ -1.84
HSP42	YDR171W	CDC40	P40968	455 aa	Predicted RBP	3.53	□□□□□ -1.84
HSP42	YDR171W	ERJ5	P43613	295 aa	Predicted RBP	3.53	□□□□□ -1.84
HSP42	YDR171W	ABM1	P47146	123 aa		3.53	□□□□□ -1.84
HSP42	YDR171W	YGR017W	P53210	297 aa		3.53	□□□□□ -1.84
HSP42	YDR171W	SSU72	P53538	206 aa	Predicted RBP	3.53	□□□□□ -1.84
HSP42	YDR171W	MPP6	P53725	186 aa	Predicted RBP	3.53	□□□□□ -1.84
HSP42	YDR171W	RCE1	Q03530	315 aa		3.53	□□□□□ -1.84
HSP42	YDR171W	YMR090W	Q04304	227 aa	Known RBP	3.53	□□□□□ -1.84
HSP42	YDR171W	CNL1	Q06333	122 aa		3.53	□□□□□ -1.84
HSP42	YDR171W	CTS2	Q06350	511 aa		3.53	□□□□□ -1.84
HSP42	YDR171W	RFU1	Q08003	200 aa		3.53	□□□□□ -1.84
HSP42	YDR171W	CSM4	Q08955	156 aa		3.53	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 191.4 ms