RNA–Protein interactions for RNA: YDR062W

LCB2, Transcript of Component of serine palmitoyltransferase, yeast

Gene LCB2, Length 1,686 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCB2	YDR062W	RNP1	P32385	249 aa		4	□□□□□ -1.77
LCB2	YDR062W	TRM7	P38238	310 aa	Known RBP	4	□□□□□ -1.77
LCB2	YDR062W	GLE2	P40066	365 aa		4	□□□□□ -1.77
LCB2	YDR062W	MDM34	P53083	459 aa		4	□□□□□ -1.77
LCB2	YDR062W	YGR042W	P53227	271 aa		4	□□□□□ -1.77
LCB2	YDR062W	RIO1	Q12196	484 aa	Known RBP	4	□□□□□ -1.77
LCB2	YDR062W	EFG1	Q3E705	233 aa	Known RBP	4	□□□□□ -1.77
LCB2	YDR062W	RSM27	P53305	110 aa		3.99	□□□□□ -1.77
LCB2	YDR062W	MPA43	P53583	542 aa	Predicted RBP	3.99	□□□□□ -1.77
LCB2	YDR062W	IMP4	P53941	290 aa	Known RBP	3.99	□□□□□ -1.77
LCB2	YDR062W	HSK3	P69852	69 aa		3.99	□□□□□ -1.77
LCB2	YDR062W	GAS3	Q03655	524 aa		3.99	□□□□□ -1.77
LCB2	YDR062W	YLR031W	Q07978	186 aa		3.99	□□□□□ -1.77
LCB2	YDR062W	YPR170W-B	P0C5R9	85 aa		3.98	□□□□□ -1.77
LCB2	YDR062W	YCR023C	P25351	611 aa		3.98	□□□□□ -1.77
LCB2	YDR062W	YBR063C	P38083	404 aa		3.98	□□□□□ -1.77
LCB2	YDR062W	ATG22	P25568	528 aa		3.97	□□□□□ -1.77
LCB2	YDR062W	BUB2	P26448	306 aa	Predicted RBP	3.97	□□□□□ -1.77
LCB2	YDR062W	BDH1	P39714	382 aa		3.97	□□□□□ -1.77
LCB2	YDR062W	ARO8	P53090	500 aa	Known RBP	3.97	□□□□□ -1.77
LCB2	YDR062W	YPL162C	Q12042	273 aa		3.97	□□□□□ -1.77
LCB2	YDR062W	BBP1	Q12365	385 aa		3.97	□□□□□ -1.77
LCB2	YDR062W	SLM6	P38343	150 aa		3.97	□□□□□ -1.77
LCB2	YDR062W	ARP3	P47117	449 aa	Known RBP	3.97	□□□□□ -1.77
LCB2	YDR062W	YGL204C	P53089	101 aa		3.97	□□□□□ -1.77
LCB2	YDR062W	GPI17	Q04080	534 aa		3.97	□□□□□ -1.77
LCB2	YDR062W	MCH1	Q07376	486 aa		3.97	□□□□□ -1.77
LCB2	YDR062W	UPS2	P35200	230 aa		3.96	□□□□□ -1.78
LCB2	YDR062W	UTP30	P36144	274 aa	Known RBP	3.96	□□□□□ -1.78
LCB2	YDR062W	TVP38	P36164	337 aa		3.96	□□□□□ -1.78
LCB2	YDR062W	YAR068W	P39564	161 aa		3.96	□□□□□ -1.78
LCB2	YDR062W	SNM1	P40993	198 aa		3.96	□□□□□ -1.78
LCB2	YDR062W	DGA1	Q08650	418 aa		3.96	□□□□□ -1.78
LCB2	YDR062W	PET9	P18239	318 aa	Known RBP	3.95	□□□□□ -1.78
LCB2	YDR062W	TOM40	P23644	387 aa	Known RBP	3.95	□□□□□ -1.78
LCB2	YDR062W	YKL102C	P34249	101 aa		3.95	□□□□□ -1.78
LCB2	YDR062W	RCN1	P36054	211 aa		3.95	□□□□□ -1.78
LCB2	YDR062W	FMP23	P38231	175 aa		3.95	□□□□□ -1.78
LCB2	YDR062W	POP4	P38336	279 aa		3.95	□□□□□ -1.78
LCB2	YDR062W	COS8	P38723	381 aa		3.95	□□□□□ -1.78
LCB2	YDR062W	CYC2	P38909	366 aa		3.95	□□□□□ -1.78
LCB2	YDR062W	FIS1	P40515	155 aa		3.95	□□□□□ -1.78
LCB2	YDR062W	SMD1	Q02260	146 aa	Predicted RBP	3.95	□□□□□ -1.78
LCB2	YDR062W	PRR2	Q12310	699 aa		3.95	□□□□□ -1.78
LCB2	YDR062W	GEP5	Q12393	293 aa		3.95	□□□□□ -1.78
LCB2	YDR062W	MPD1	Q12404	318 aa	Known RBP	3.95	□□□□□ -1.78
LCB2	YDR062W	YFR032C-B	Q8TGU2	87 aa		3.95	□□□□□ -1.78
LCB2	YDR062W	PDR18	P53756	1333 aa		3.95	□□□□□ -1.78
LCB2	YDR062W	UBR2	Q07963	1872 aa		3.94	□□□□□ -1.78
LCB2	YDR062W	SEC17	P32602	292 aa		3.94	□□□□□ -1.78
LCB2	YDR062W	YGP1	P38616	354 aa	Known RBP	3.94	□□□□□ -1.78
LCB2	YDR062W	AGE2	P40529	298 aa		3.94	□□□□□ -1.78
LCB2	YDR062W	PGA1	P53896	198 aa		3.94	□□□□□ -1.78
LCB2	YDR062W	TMA20	P89886	181 aa	Predicted RBP	3.94	□□□□□ -1.78
LCB2	YDR062W	SWP1	Q02795	286 aa		3.94	□□□□□ -1.78
LCB2	YDR062W	YDR476C	Q03362	224 aa		3.94	□□□□□ -1.78
LCB2	YDR062W	CBP6	P07253	162 aa	Predicted RBP	3.94	□□□□□ -1.78
LCB2	YDR062W	SGA1	P08019	549 aa		3.94	□□□□□ -1.78
LCB2	YDR062W	YDR249C	Q03787	373 aa		3.94	□□□□□ -1.78
LCB2	YDR062W	YPR014C	Q6B0W2	109 aa		3.94	□□□□□ -1.78
LCB2	YDR062W	MOT1	P32333	1867 aa		3.93	□□□□□ -1.78
LCB2	YDR062W	ADH3	P07246	375 aa	Known RBP	3.93	□□□□□ -1.78
LCB2	YDR062W	IDP1	P21954	428 aa	Known RBP	3.93	□□□□□ -1.78
LCB2	YDR062W	SKG1	P36169	355 aa		3.93	□□□□□ -1.78
LCB2	YDR062W	PHO88	P38264	188 aa	Predicted RBP	3.93	□□□□□ -1.78
LCB2	YDR062W	ATG39	Q06159	398 aa		3.93	□□□□□ -1.78
LCB2	YDR062W	ADH1	P00330	348 aa	Known RBP	3.92	□□□□□ -1.78
LCB2	YDR062W	SKI6	P46948	246 aa	Predicted RBP	3.92	□□□□□ -1.78
LCB2	YDR062W	YJR111C	P47148	283 aa	Known RBP	3.92	□□□□□ -1.78
LCB2	YDR062W	ALG9	P53868	555 aa	Known RBP	3.92	□□□□□ -1.78
LCB2	YDR062W	PKR1	Q03880	122 aa	Known RBP	3.92	□□□□□ -1.78
LCB2	YDR062W	YLR046C	Q12253	270 aa		3.92	□□□□□ -1.78
LCB2	YDR062W	YDR524C-B	Q3E6R4	66 aa		3.92	□□□□□ -1.78
LCB2	YDR062W	PFS2	P42841	465 aa	Known RBP	3.91	□□□□□ -1.78
LCB2	YDR062W	RSM10	Q03201	203 aa		3.91	□□□□□ -1.78
LCB2	YDR062W	YPR202W	Q08993	238 aa		3.91	□□□□□ -1.78
LCB2	YDR062W	MYO1	P08964	1928 aa		3.91	□□□□□ -1.78
LCB2	YDR062W	YLR156W	P0CE96	114 aa		3.9	□□□□□ -1.78
LCB2	YDR062W	YLR159W	P0CE97	114 aa		3.9	□□□□□ -1.78
LCB2	YDR062W	YLR161W	P0CE98	114 aa		3.9	□□□□□ -1.78
LCB2	YDR062W	RPB3	P16370	318 aa	Known RBP	3.9	□□□□□ -1.78
LCB2	YDR062W	CKS1	P20486	150 aa	Known RBP	3.9	□□□□□ -1.78
LCB2	YDR062W	BET1	P22804	142 aa		3.9	□□□□□ -1.78
LCB2	YDR062W	SDT1	P53078	280 aa		3.9	□□□□□ -1.78
LCB2	YDR062W	TRM12	Q04235	462 aa		3.9	□□□□□ -1.78
LCB2	YDR062W	IES3	Q12345	250 aa		3.9	□□□□□ -1.78
LCB2	YDR062W	TSC3	Q3E790	80 aa		3.9	□□□□□ -1.78
LCB2	YDR062W	YDR034W-B	Q6Q5X2	51 aa		3.9	□□□□□ -1.78
LCB2	YDR062W	MRPS28	P21771	286 aa		3.9	□□□□□ -1.79
LCB2	YDR062W	SPO13	P23624	291 aa		3.9	□□□□□ -1.79
LCB2	YDR062W	LDB16	P25587	256 aa		3.9	□□□□□ -1.79
LCB2	YDR062W	IPI1	P38803	334 aa	Predicted RBP	3.9	□□□□□ -1.79
LCB2	YDR062W	MRX8	Q05473	314 aa		3.9	□□□□□ -1.79
LCB2	YDR062W	MCP1	Q12106	302 aa		3.9	□□□□□ -1.79
LCB2	YDR062W	VPS13	Q07878	3144 aa		3.89	□□□□□ -1.79
LCB2	YDR062W	REP2	P03872	296 aa		3.89	□□□□□ -1.79
LCB2	YDR062W	YEL045C	P32616	141 aa		3.89	□□□□□ -1.79
LCB2	YDR062W	OPY1	P38271	328 aa		3.89	□□□□□ -1.79
LCB2	YDR062W	MED6	P38782	295 aa		3.89	□□□□□ -1.79
LCB2	YDR062W	OST2	P46964	130 aa		3.89	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 144.4 ms